RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SPANXN1Q5VSR9 72 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 DPH3Q96FX2 82 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 CNFNQ9BYD5 112 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 C4orf26Q17RF5 130 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 MAPK1IP1LQ8NDC0 245 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 C17orf77Q96MU5 243 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 PRO0628Q9UI54 55 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 IGKV2-40A0A087WW87 121 aaPredicted RBP8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 IGKV2D-40P01614 121 aaPredicted RBP8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 C2orf66Q6UXQ4 117 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 ABCA2Q9BZC7 2435 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 BAHCC1Q9P281 2608 aa8.35□□□□□ -1.07
CLSTN3-207ENST00000537408 H3BRN7 92 aa8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 MALP21145 153 aa8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 CEMP1Q6PRD7 247 aaPredicted RBP8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 CRYGBP07316 175 aa8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 IGLV1-44P01699 117 aa8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 MSMBP08118 114 aa8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 ECSCRQ19T08 205 aa8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 PRRC2AP48634 2157 aaKnown RBP8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 H7C423 109 aa8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 ERCC8Q13216 396 aa8.34□□□□□ -1.07
CLSTN3-207ENST00000537408 TRAV41A0A0B4J266 112 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 CNTFRP26992 372 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 DEFB121Q5J5C9 76 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 PVRIGQ6DKI7 326 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 SLC50A1Q9BRV3 221 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 E7EUB6 86 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 J3QQQ9 107 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 LY6HO94772 140 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 ZNF415Q09FC8 603 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 JPT2Q9H910 190 aa8.33□□□□□ -1.08
CLSTN3-207ENST00000537408 TMEM178BH3BS89 294 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 J3QLI3 93 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 Q6ZS46 218 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 ZNF833PQ6ZTB9 187 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 ICOSQ9Y6W8 199 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 CRYGDP07320 174 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 NRACQ8N912 160 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 TRIAP1O43715 76 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 ZNF22P17026 224 aaPredicted RBP8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 PRB3Q04118 309 aaPredicted RBP8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 C8orf31Q8N9H6 132 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 Q8TAT8 98 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 IGHV3OR16-10A0A075B7F0 116 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 RNF125Q96EQ8 232 aa8.32□□□□□ -1.08
CLSTN3-207ENST00000537408 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 WFDC11Q8NEX6 87 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 DSCAMO60469 2012 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 POLQO75417 2590 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 C11orf86A6NJI1 115 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 PPP1R17O96001 155 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 CGB3P0DN86 165 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 CGB7P0DN87 165 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 MALRD1Q5VYJ5 2156 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 TRAV8-3A0A0A6YYJ7 113 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 TINCRA0A1B0GVN0 87 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 PEMTQ9UBM1 199 aa8.31□□□□□ -1.08
CLSTN3-207ENST00000537408 ABCA12Q86UK0 2595 aa8.3□□□□□ -1.08
CLSTN3-207ENST00000537408 DSCR8Q96T75 97 aa8.3□□□□□ -1.08
CLSTN3-207ENST00000537408 JMJD1CQ15652 2540 aa8.3□□□□□ -1.08
CLSTN3-207ENST00000537408 CHD6Q8TD26 2715 aa8.3□□□□□ -1.08
CLSTN3-207ENST00000537408 IGKV3-7A0A075B6H7 116 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 TRGV3P03979 118 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 C10orf105Q8TEF2 133 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 DPM3Q9P2X0 92 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 V9GYY9 64 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 SEC61GP60059 68 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 LINC00477Q96M19 166 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 TNCP24821 2201 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 CGB1A6NKQ9 187 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 PRSS2P07478 247 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 CTSZQ9UBR2 303 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 USP9YO00507 2555 aaPredicted RBP8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 C2CD3Q4AC94 2353 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 ZNF80P51504 273 aaPredicted RBP8.29□□□□□ -1.08
CLSTN3-207ENST00000537408 TMEM141Q96I45 108 aa8.28□□□□□ -1.08
CLSTN3-207ENST00000537408 IGLV3-9A0A075B6K5 115 aa8.28□□□□□ -1.08
CLSTN3-207ENST00000537408 IGHV1-69DA0A0B4J2H0 117 aa8.28□□□□□ -1.08
CLSTN3-207ENST00000537408 IGHV3-35A0A0C4DH35 117 aa8.28□□□□□ -1.08
CLSTN3-207ENST00000537408 CDSNQ15517 529 aa8.28□□□□□ -1.08
CLSTN3-207ENST00000537408 SERP2Q8N6R1 65 aa8.28□□□□□ -1.08
CLSTN3-207ENST00000537408 LEPROTO15243 131 aa8.28□□□□□ -1.08
CLSTN3-207ENST00000537408 ELANEP08246 267 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 SYNJ2BPP57105 145 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 RNF152Q8N8N0 203 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 GAFA1Q96PS6 74 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 PYGO1Q9Y3Y4 419 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 LST1O00453 97 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 ZNRD1Q9P1U0 126 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 S4R3C0 116 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 F8P00451 2351 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 SPTBN5Q9NRC6 3674 aaKnown RBP8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 MGPP08493 103 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 PFN2P35080 140 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms