RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 HLA-DRB4P13762 266 aa9.66□□□□□ -0.86
TRIM25-202ENST00000537230 LINC01356Q8N9X3 169 aa9.66□□□□□ -0.86
TRIM25-202ENST00000537230 FAM19A4Q96LR4 140 aa9.66□□□□□ -0.86
TRIM25-202ENST00000537230 SPANXB1Q9NS25 103 aaPredicted RBP9.66□□□□□ -0.86
TRIM25-202ENST00000537230 LENEPQ9Y5L5 61 aa9.66□□□□□ -0.86
TRIM25-202ENST00000537230 TSSC4Q9Y5U2 329 aaPredicted RBP9.66□□□□□ -0.86
TRIM25-202ENST00000537230 HLA-DRB4X5D2U9 266 aa9.66□□□□□ -0.86
TRIM25-202ENST00000537230 ITPR2Q14571 2701 aa9.65□□□□□ -0.86
TRIM25-202ENST00000537230 PRRC2AP48634 2157 aaKnown RBP9.65□□□□□ -0.86
TRIM25-202ENST00000537230 IGHV4-4A0A075B6R2 117 aa9.65□□□□□ -0.86
TRIM25-202ENST00000537230 RNF223E7ERA6 249 aa9.65□□□□□ -0.86
TRIM25-202ENST00000537230 WNK1Q9H4A3 2382 aa9.65□□□□□ -0.86
TRIM25-202ENST00000537230 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.87
TRIM25-202ENST00000537230 MTORP42345 2549 aa9.65□□□□□ -0.87
TRIM25-202ENST00000537230 TRAV21A0A0B4J279 112 aa9.64□□□□□ -0.87
TRIM25-202ENST00000537230 F8VRH5 84 aa9.64□□□□□ -0.87
TRIM25-202ENST00000537230 PLNP26678 52 aa9.64□□□□□ -0.87
TRIM25-202ENST00000537230 DCANP1Q8TF63 244 aa9.64□□□□□ -0.87
TRIM25-202ENST00000537230 F8W1H4 67 aa9.64□□□□□ -0.87
TRIM25-202ENST00000537230 SLC25A16P16260 332 aa9.64□□□□□ -0.87
TRIM25-202ENST00000537230 GATA3P23771 443 aa9.64□□□□□ -0.87
TRIM25-202ENST00000537230 C14orf178Q8N769 122 aaPredicted RBP9.64□□□□□ -0.87
TRIM25-202ENST00000537230 CYSLTR1Q9Y271 337 aa9.64□□□□□ -0.87
TRIM25-202ENST00000537230 TRBV7-3A0A075B6L6 115 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 RNASE3P12724 160 aaKnown RBP9.63□□□□□ -0.87
TRIM25-202ENST00000537230 S100A4P26447 101 aaKnown RBP9.63□□□□□ -0.87
TRIM25-202ENST00000537230 RPL39LQ96EH5 51 aaKnown RBP9.63□□□□□ -0.87
TRIM25-202ENST00000537230 OR11H12B2RN74 326 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 H7C1H1 209 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 DSCR9P59020 149 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 TAL2Q16559 108 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 DUX5Q96PT3 197 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 SCGB3A1Q96QR1 104 aa9.63□□□□□ -0.87
TRIM25-202ENST00000537230 INSL3P51460 131 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 GAGE12HA6NDE8 117 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 RRN3P1Q2M238 152 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 TCTEX1D4Q5JR98 221 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 SPAG8Q99932 426 aaPredicted RBP9.62□□□□□ -0.87
TRIM25-202ENST00000537230 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 PHLDA3Q9Y5J5 127 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 MYMXA0A1B0GTQ4 84 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 ZNF688P0C7X2 276 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 ASIPP42127 132 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
TRIM25-202ENST00000537230 RASL10AQ92737 203 aa9.62□□□□□ -0.87
TRIM25-202ENST00000537230 IGKV3-20P01619 116 aa9.61□□□□□ -0.87
TRIM25-202ENST00000537230 COX6B1P14854 86 aa9.61□□□□□ -0.87
TRIM25-202ENST00000537230 CD300EQ496F6 205 aaPredicted RBP9.61□□□□□ -0.87
TRIM25-202ENST00000537230 APRG1Q8IVJ8 170 aa9.61□□□□□ -0.87
TRIM25-202ENST00000537230 GEMIN7Q9H840 131 aaKnown RBP9.61□□□□□ -0.87
TRIM25-202ENST00000537230 BEX4Q9NWD9 120 aaPredicted RBP9.61□□□□□ -0.87
TRIM25-202ENST00000537230 GAGE13Q4V321 117 aa9.61□□□□□ -0.87
TRIM25-202ENST00000537230 HIST2H2BDQ6DRA6 164 aa9.61□□□□□ -0.87
TRIM25-202ENST00000537230 ZNF843Q8N446 348 aa9.61□□□□□ -0.87
TRIM25-202ENST00000537230 MRAP2Q96G30 205 aa9.61□□□□□ -0.87
TRIM25-202ENST00000537230 JPT2Q9H910 190 aa9.61□□□□□ -0.87
TRIM25-202ENST00000537230 TRAV12-1A0A0B4J245 112 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 SYNJ2BPP57105 145 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 SFTA2Q6UW10 78 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 NEXN-AS1Q8NBZ9 246 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 NOTCH3Q9UM47 2321 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 HELZ2Q9BYK8 2649 aaKnown RBP9.6□□□□□ -0.87
TRIM25-202ENST00000537230 K7EMT4 169 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 LGALS1P09382 135 aaKnown RBP9.6□□□□□ -0.87
TRIM25-202ENST00000537230 MORN3Q6PF18 240 aaPredicted RBP9.6□□□□□ -0.87
TRIM25-202ENST00000537230 TOMM6Q96B49 74 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 PRO0461Q9UI25 63 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 JMJD1CQ15652 2540 aa9.6□□□□□ -0.87
TRIM25-202ENST00000537230 TRAV12-3A0A0B4J271 114 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 KLLNB2CW77 178 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 MGPP08493 103 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 ORMDL2Q53FV1 153 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 C2orf66Q6UXQ4 117 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 PRADC1Q9BSG0 188 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 ZNF580Q9UK33 172 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 TRAV12-2A0A075B6T6 113 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 IGHV4-31P0DP07 118 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 BAALCQ8WXS3 180 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 IGHV4OR15-8A0A075B7B6 117 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 A0A087WW49 117 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 A0A1B0GWB2 263 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 J3QR89 54 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 HOXA3O43365 443 aaPredicted RBP9.59□□□□□ -0.87
TRIM25-202ENST00000537230 C18orf65Q6ZTR6 163 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 VPREB3Q9UKI3 123 aa9.59□□□□□ -0.87
TRIM25-202ENST00000537230 PRSS29PA6NIE9 313 aa9.58□□□□□ -0.88
TRIM25-202ENST00000537230 DPH3P1Q9H4G8 78 aa9.58□□□□□ -0.88
TRIM25-202ENST00000537230 ZNF702PQ9H963 129 aa9.58□□□□□ -0.88
TRIM25-202ENST00000537230 TSPAN13O95857 204 aa9.58□□□□□ -0.88
TRIM25-202ENST00000537230 DEFB136Q30KP8 78 aa9.58□□□□□ -0.88
TRIM25-202ENST00000537230 PLEKHB2Q96CS7 222 aa9.58□□□□□ -0.88
TRIM25-202ENST00000537230 ZNF815PA8K554 130 aa9.57□□□□□ -0.88
TRIM25-202ENST00000537230 FSHBP01225 129 aa9.57□□□□□ -0.88
TRIM25-202ENST00000537230 EMP1P54849 157 aa9.57□□□□□ -0.88
TRIM25-202ENST00000537230 KLHL30-AS1Q8NEE0 82 aa9.57□□□□□ -0.88
TRIM25-202ENST00000537230 J3QLI3 93 aa9.57□□□□□ -0.88
TRIM25-202ENST00000537230 SCGB1D4Q6XE38 83 aa9.57□□□□□ -0.88
TRIM25-202ENST00000537230 Q6YL49 198 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms