RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TMEM128Q5BJH2 165 aa5.48□□□□□ -1.53
CPSF7-217ENST00000537162 C10orf113Q5VZT2 155 aa5.48□□□□□ -1.53
CPSF7-217ENST00000537162 AKAP14Q86UN6 197 aa5.48□□□□□ -1.53
CPSF7-217ENST00000537162 MLST8Q9BVC4 326 aa5.48□□□□□ -1.53
CPSF7-217ENST00000537162 GPR132Q9UNW8 380 aa5.48□□□□□ -1.53
CPSF7-217ENST00000537162 PYYP10082 97 aa5.47□□□□□ -1.53
CPSF7-217ENST00000537162 SCGB2B2Q4G0G5 96 aa5.47□□□□□ -1.53
CPSF7-217ENST00000537162 FAAP20Q6NZ36 180 aa5.47□□□□□ -1.53
CPSF7-217ENST00000537162 PHF5AQ7RTV0 110 aaKnown RBP5.47□□□□□ -1.53
CPSF7-217ENST00000537162 TCTE3Q8IZS6 198 aa5.47□□□□□ -1.53
CPSF7-217ENST00000537162 MITD1Q8WV92 249 aa5.47□□□□□ -1.53
CPSF7-217ENST00000537162 RPP21Q9H633 154 aaKnown RBP5.47□□□□□ -1.53
CPSF7-217ENST00000537162 TRAV6A0A075B6T7 132 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 TRBV6-8A0A0A6YYG3 113 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 DUXBA0A1W2PPF3 345 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 ANXA3P12429 323 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 AMTP48728 403 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 RBX1P62877 108 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 PXDC1Q5TGL8 231 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 ZFP2Q6ZN57 461 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 ATP5SQ99766 215 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 PPDPFQ9H3Y8 114 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 LINC00474Q9P2X8 69 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 C14orf166Q9Y224 244 aaKnown RBP5.46□□□□□ -1.54
CPSF7-217ENST00000537162 TIMM9Q9Y5J7 89 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 ALG5Q9Y673 324 aa5.46□□□□□ -1.54
CPSF7-217ENST00000537162 GOSR2O14653 212 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 GIPP09681 153 aaPredicted RBP5.45□□□□□ -1.54
CPSF7-217ENST00000537162 UBE2D3P61077 147 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 UBE2D2P62837 147 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 REG3AQ06141 175 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 KRTAP6-3Q3LI67 103 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 KCNS1Q96KK3 526 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 CHCHD5Q9BSY4 110 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 MED28Q9H204 178 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 SLC39A9Q9NUM3 307 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 C11orf21Q9P2W6 132 aa5.45□□□□□ -1.54
CPSF7-217ENST00000537162 A0A087X002 238 aa5.44□□□□□ -1.54
CPSF7-217ENST00000537162 C9orf170A2RU37 121 aa5.44□□□□□ -1.54
CPSF7-217ENST00000537162 F6UZH7 168 aa5.44□□□□□ -1.54
CPSF7-217ENST00000537162 SFT2D2O95562 160 aa5.44□□□□□ -1.54
CPSF7-217ENST00000537162 KRTAP20-1Q3LI63 56 aa5.44□□□□□ -1.54
CPSF7-217ENST00000537162 CARHSP1Q9Y2V2 147 aaKnown RBP5.44□□□□□ -1.54
CPSF7-217ENST00000537162 KCNIP3Q9Y2W7 256 aa5.44□□□□□ -1.54
CPSF7-217ENST00000537162 STRAPQ9Y3F4 350 aaKnown RBP5.44□□□□□ -1.54
CPSF7-217ENST00000537162 M0R2T5 61 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 SYNGR2O43760 224 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 SSNA1O43805 119 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 SLC25A6P12236 298 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 RNASE3P12724 160 aaKnown RBP5.43□□□□□ -1.54
CPSF7-217ENST00000537162 RPP30P78346 268 aaKnown RBP5.43□□□□□ -1.54
CPSF7-217ENST00000537162 GAGE6Q13070 117 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 PPP1R1AQ13522 171 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 NDUFA5Q16718 116 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 NUDT10Q8NFP7 164 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 PTH2Q96A98 100 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 TVP23CQ96ET8 276 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 NUDT11Q96G61 164 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 MGST2Q99735 147 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 AAMDCQ9H7C9 122 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 NPVFQ9HCQ7 196 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 FLVCR2Q9UPI3 526 aa5.43□□□□□ -1.54
CPSF7-217ENST00000537162 PET100P0DJ07 73 aa5.42□□□□□ -1.54
CPSF7-217ENST00000537162 PDE6HQ13956 83 aa5.42□□□□□ -1.54
CPSF7-217ENST00000537162 NTM-AS1Q6ZSK4 140 aa5.42□□□□□ -1.54
CPSF7-217ENST00000537162 LINC00173Q6ZV60 143 aa5.42□□□□□ -1.54
CPSF7-217ENST00000537162 C12orf45Q8N5I9 185 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-217ENST00000537162 LINC00526Q96FQ7 95 aa5.42□□□□□ -1.54
CPSF7-217ENST00000537162 HYLS1Q96M11 299 aa5.42□□□□□ -1.54
CPSF7-217ENST00000537162 NMES1Q9C002 83 aa5.42□□□□□ -1.54
CPSF7-217ENST00000537162 FLGP20930 4061 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-217ENST00000537162 TRAV21A0A0B4J279 112 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 ATP6V1G1O75348 118 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 PTTG1IPP53801 180 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 EIF5AP63241 154 aaKnown RBP5.41□□□□□ -1.54
CPSF7-217ENST00000537162 LGALSLQ3ZCW2 172 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-217ENST00000537162 ZFP69Q49AA0 526 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 MIC13Q5XKP0 118 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 C20orf203Q8NBC4 194 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 CIB3Q96Q77 187 aaPredicted RBP5.41□□□□□ -1.54
CPSF7-217ENST00000537162 SEC22CQ9BRL7 303 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 TMEM14CQ9P0S9 112 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 MGAT4CQ9UBM8 478 aa5.41□□□□□ -1.54
CPSF7-217ENST00000537162 HMSDA8MTL9 139 aa5.4□□□□□ -1.54
CPSF7-217ENST00000537162 A8MWV9 139 aa5.4□□□□□ -1.54
CPSF7-217ENST00000537162 MED6O75586 246 aa5.4□□□□□ -1.54
CPSF7-217ENST00000537162 H2BFSP57053 126 aa5.4□□□□□ -1.54
CPSF7-217ENST00000537162 SEC61BP60468 96 aaKnown RBP5.4□□□□□ -1.54
CPSF7-217ENST00000537162 ARL16Q0P5N6 197 aa5.4□□□□□ -1.54
CPSF7-217ENST00000537162 GAGE2BQ13066 116 aa5.4□□□□□ -1.54
CPSF7-217ENST00000537162 ZNF345Q14585 488 aa5.4□□□□□ -1.54
CPSF7-217ENST00000537162 C9orf116Q5BN46 136 aaPredicted RBP5.4□□□□□ -1.54
CPSF7-217ENST00000537162 A0A087WZ39 114 aa5.39□□□□□ -1.55
CPSF7-217ENST00000537162 GVQW2A0A096LPI5 108 aaPredicted RBP5.39□□□□□ -1.55
CPSF7-217ENST00000537162 TRAV8-4A0A0B4J246 113 aa5.39□□□□□ -1.55
CPSF7-217ENST00000537162 RBAKDNA6NC62 111 aa5.39□□□□□ -1.55
CPSF7-217ENST00000537162 GAGE12HA6NDE8 117 aa5.39□□□□□ -1.55
CPSF7-217ENST00000537162 C9orf118A6NHY6 69 aa5.39□□□□□ -1.55
CPSF7-217ENST00000537162 EIF3GO75821 320 aaKnown RBP eCLIP5.39□□□□□ -1.55
CPSF7-217ENST00000537162 P01737 135 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms