RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 LOC389332A0A1B0GUA5 103 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 RBMY1BA6NDE4 496 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 RBMY1EA6NEQ0 496 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 ZNF815PA8K554 130 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 LYRM9A8MSI8 78 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 IQCF6A8MYZ5 107 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 D6R8Y8 96 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 F8VRH5 84 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 NDUFS5O43920 106 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 TIMM17BO60830 172 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1D-16P01601 117 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 RBMY1DP0C7P1 496 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 RBMY1A1P0DJD3 496 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 RBMY1CP0DJD4 496 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 RNASE2P10153 161 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 ZNF22P17026 224 aaPredicted RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 LGALS3P17931 250 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 SAA4P35542 130 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 XCL1P47992 114 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 UBE2E1P51965 193 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 SNRPD3P62318 126 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 RBMY1FQ15415 496 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 PIGYQ3MUY2 71 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 GUSBP11Q6P575 273 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 SFTA2Q6UW10 78 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 IGFL3Q6UXB1 125 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 Q6ZRP5 223 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 SLC25A29Q8N8R3 303 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 UBALD1Q8TB05 177 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 DCANP1Q8TF63 244 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 TMEM263Q8WUH6 116 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 TSACCQ96A04 125 aaPredicted RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 ZNF799Q96GE5 643 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 UBE2E2Q96LR5 201 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 ZNF714Q96N38 554 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 TM2D3Q9BRN9 247 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 SLC50A1Q9BRV3 221 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 MRPL35Q9NZE8 188 aaKnown RBP1.8□□□□□ -2.12
SKA3-207ENST00000536239 XCL2Q9UBD3 114 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 LTBP2Q14767 1821 aa1.8□□□□□ -2.12
SKA3-207ENST00000536239 TRAV3A0A0B4J244 114 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 A0A1W2PQD3 144 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 IBA57-AS1B1ANH7 110 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 C4orf51C9J302 202 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 H7BZZ5 65 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 LST1O00453 97 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 EFNA2O43921 213 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 COX7A2P2O60397 106 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 NXPH4O95158 308 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 CCKP06307 115 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 ARMS2P0C7Q2 107 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 COX6B1P14854 86 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 DUTP33316 252 aaKnown RBP1.79□□□□□ -2.12
SKA3-207ENST00000536239 CKS2P33552 79 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 SUB1P53999 127 aaKnown RBP eCLIP1.79□□□□□ -2.12
SKA3-207ENST00000536239 APOC4P55056 127 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 KLKP1Q107X0 134 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 LAGE3Q14657 143 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 RHOHQ15669 191 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 Q1RN00 199 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 MRPL51Q4U2R6 128 aaKnown RBP1.79□□□□□ -2.12
SKA3-207ENST00000536239 ZNF542PQ5EBM4 170 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 S100A7L2Q5SY68 101 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 FAM222AQ5U5X8 452 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 KTN1-AS1Q86SY8 53 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 CD177Q8N6Q3 437 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 LY6G5BQ8NDX9 201 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 SMCR5Q8TEV8 140 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 ITLN1Q8WWA0 313 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 SPTSSAQ969W0 71 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 FAM167A-AS1Q96KT0 104 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 TIMM21Q9BVV7 248 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 DEFB127Q9H1M4 99 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 RBM12B-AS1Q9P1G2 102 aa1.79□□□□□ -2.12
SKA3-207ENST00000536239 LRRK1Q38SD2 2015 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1-27A0A075B6S5 117 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 TRAV7A0A075B6U4 112 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 TRAV13-2A0A0B4J235 113 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1-8A0A0C4DH67 115 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1-12A0A0C4DH73 117 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 A0A0J9YX75 114 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 TRBV27A0A0K0K1C4 114 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 TRBV10-3A0A0K0K1G6 114 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 TMEM223A0PJW6 202 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 CCL21O00585 134 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 NDUFA3O95167 84 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 IGKV1D-12P01611 117 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 DAD1P61803 113 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 RBM3P98179 157 aaKnown RBP1.78□□□□□ -2.12
SKA3-207ENST00000536239 EIF4EBP1Q13541 118 aaPredicted RBP1.78□□□□□ -2.12
SKA3-207ENST00000536239 PLGLAQ15195 96 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 NSUN5P1Q3KNT7 163 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 ATP5EP2Q5VTU8 51 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 PVRIGQ6DKI7 326 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 LYPD5Q6UWN5 251 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 LINC00322Q6ZN03 302 aaPredicted RBP1.78□□□□□ -2.12
SKA3-207ENST00000536239 ZNF826PQ6ZT77 177 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 WDR86Q86TI4 376 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 DYNAPQ8N1N2 210 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 TMEM75Q8N9X5 138 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms