RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 MBD3L1Q8WWY6 194 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 GTSF1LQ9H1H1 148 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 PARLQ9H300 379 aa7.27□□□□□ -1.25
CCDC60-202ENST00000535685 TRAV8-6A0A0B4J262 113 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 A0A0D9SG52 128 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 B4DEV8 164 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 KRBOX1C9JBD0 128 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 LTAP01374 205 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 PTTG1IPP53801 180 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 FAM162BQ5T6X4 162 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 MAPKAPK5-AS1Q8N8E1 139 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 ATP6V0E2Q8NHE4 81 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 ZC2HC1AQ96GY0 325 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 SCRT2Q9NQ03 307 aa7.26□□□□□ -1.25
CCDC60-202ENST00000535685 RHODO00212 210 aa7.25□□□□□ -1.25
CCDC60-202ENST00000535685 S100A9P06702 114 aaKnown RBP7.25□□□□□ -1.25
CCDC60-202ENST00000535685 IGHV3-73A0A0B4J1V6 119 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 SH2D1AO60880 128 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 CXCL1P09341 107 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 ARMS2P0C7Q2 107 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 GCSHP23434 173 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 UBE2G1P62253 170 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 EIF5AP63241 154 aaKnown RBP7.24□□□□□ -1.25
CCDC60-202ENST00000535685 LAGE3Q14657 143 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 LGALSLQ3ZCW2 172 aaPredicted RBP7.24□□□□□ -1.25
CCDC60-202ENST00000535685 Q6ZSN1 163 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 OR11H4Q8NGC9 324 aa7.24□□□□□ -1.25
CCDC60-202ENST00000535685 A0A087WWC5 75 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 A0A1B0GVG6 124 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 LRCOL1A6NCL2 159 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 SMLR1H3BR10 107 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 H3BVH4 76 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 BCL2L11O43521 198 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 AKR1C3P42330 323 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 OR10J3Q5JRS4 329 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 CST9LP1Q5W188 147 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 SFRP2Q96HF1 295 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 MLST8Q9BVC4 326 aa7.23□□□□□ -1.25
CCDC60-202ENST00000535685 KANTRA0A1W2PQU2 76 aa7.22□□□□□ -1.25
CCDC60-202ENST00000535685 PAGE4O60829 102 aa7.22□□□□□ -1.25
CCDC60-202ENST00000535685 NTN5Q8WTR8 489 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-202ENST00000535685 SFT2D1Q8WV19 159 aa7.22□□□□□ -1.25
CCDC60-202ENST00000535685 SAMD10Q9BYL1 202 aa7.22□□□□□ -1.25
CCDC60-202ENST00000535685 JPT2Q9H910 190 aa7.22□□□□□ -1.25
CCDC60-202ENST00000535685 TRAV1-1A0A0B4J248 108 aa7.21□□□□□ -1.26
CCDC60-202ENST00000535685 TRBV10-1A0A0K0K1A3 114 aa7.21□□□□□ -1.26
CCDC60-202ENST00000535685 M0R036 132 aa7.21□□□□□ -1.26
CCDC60-202ENST00000535685 TPT1P13693 172 aaKnown RBP7.21□□□□□ -1.26
CCDC60-202ENST00000535685 XGP55808 180 aa7.21□□□□□ -1.26
CCDC60-202ENST00000535685 XP32Q5T750 250 aa7.21□□□□□ -1.26
CCDC60-202ENST00000535685 ZFP82Q8N141 532 aa7.21□□□□□ -1.26
CCDC60-202ENST00000535685 FAM213BQ8TBF2 198 aa7.21□□□□□ -1.26
CCDC60-202ENST00000535685 ZNF471Q9BX82 626 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-202ENST00000535685 PHLDA3Q9Y5J5 127 aa7.21□□□□□ -1.26
CCDC60-202ENST00000535685 GRIFINA4D1Z8 144 aa7.2□□□□□ -1.26
CCDC60-202ENST00000535685 GAGE12JA6NER3 117 aa7.2□□□□□ -1.26
CCDC60-202ENST00000535685 KRTAP10-1P60331 282 aa7.2□□□□□ -1.26
CCDC60-202ENST00000535685 GAGE1Q13065 139 aa7.2□□□□□ -1.26
CCDC60-202ENST00000535685 GAGE4Q13068 117 aa7.2□□□□□ -1.26
CCDC60-202ENST00000535685 GAGE5Q13069 117 aa7.2□□□□□ -1.26
CCDC60-202ENST00000535685 C14orf178Q8N769 122 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-202ENST00000535685 TM2D2Q9BX73 214 aa7.2□□□□□ -1.26
CCDC60-202ENST00000535685 Q9UF83 564 aa7.2□□□□□ -1.26
CCDC60-202ENST00000535685 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 SNAI2O43623 268 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 PSCAO43653 123 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 PFDN1O60925 122 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 IGHV3-30P01768 117 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 IGHV3-33P01772 117 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 IGHV3-30-3P0DP02 117 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 IGHV3-30-5P0DP03 117 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 RAB5CP51148 216 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 TMUB2Q71RG4 321 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 BAGE2Q86Y30 109 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 OR10G8Q8NGN5 311 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 C11orf52Q96A22 123 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 CHCHD7Q9BUK0 85 aa7.19□□□□□ -1.26
CCDC60-202ENST00000535685 FAT1Q14517 4588 aa7.18□□□□□ -1.26
CCDC60-202ENST00000535685 C1QBP02746 253 aa7.18□□□□□ -1.26
CCDC60-202ENST00000535685 OR5AL1P0C617 328 aa7.18□□□□□ -1.26
CCDC60-202ENST00000535685 Q8N814 137 aa7.18□□□□□ -1.26
CCDC60-202ENST00000535685 TMEM70Q9BUB7 260 aa7.18□□□□□ -1.26
CCDC60-202ENST00000535685 MANBALQ9NQG1 85 aa7.18□□□□□ -1.26
CCDC60-202ENST00000535685 COX11Q9Y6N1 276 aa7.18□□□□□ -1.26
CCDC60-202ENST00000535685 TRBV7-3A0A075B6L6 115 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 M0R381 172 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 FUSP35637 526 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCDC60-202ENST00000535685 RAB4BP61018 213 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 UBE2D3P61077 147 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 UBE2D2P62837 147 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 RPL36AP83881 106 aaKnown RBP7.17□□□□□ -1.26
CCDC60-202ENST00000535685 FAM74A4Q5TZK3 123 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 EIF5AL1Q6IS14 154 aaKnown RBP7.17□□□□□ -1.26
CCDC60-202ENST00000535685 PRR27Q6MZM9 219 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 NIT1Q86X76 327 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 RPL36ALQ969Q0 106 aaKnown RBP7.17□□□□□ -1.26
CCDC60-202ENST00000535685 Q9HAA7 133 aa7.17□□□□□ -1.26
CCDC60-202ENST00000535685 VPS13BQ7Z7G8 4022 aa7.16□□□□□ -1.26
CCDC60-202ENST00000535685 TMSB15BA0A087X1C1 80 aa7.16□□□□□ -1.26
CCDC60-202ENST00000535685 IGLV5-52A0A0A0MRZ9 124 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms