RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 IFNA21P01568 189 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 TPT1P13693 172 aaKnown RBP-1.34□□□□□ -2.62
COPB1-212ENST00000534771 CCL3L1P16619 93 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 ADCYAP1P18509 176 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 TAF1AQ15573 450 aaPredicted RBP-1.34□□□□□ -2.62
COPB1-212ENST00000534771 CYP2G1PQ6ZSU1 146 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 DIRC1Q969H9 104 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 GPX7Q96SL4 187 aaPredicted RBP-1.34□□□□□ -2.62
COPB1-212ENST00000534771 PBDC1Q9BVG4 233 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 TAF9BQ9HBM6 251 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 TP53AIP1Q9HCN2 124 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 V9GYV3 84 aa-1.34□□□□□ -2.62
COPB1-212ENST00000534771 SIPA1L3O60292 1781 aaPredicted RBP-1.34□□□□□ -2.62
COPB1-212ENST00000534771 PLXNA2O75051 1894 aa-1.35□□□□□ -2.62
COPB1-212ENST00000534771 ADGBQ8N7X0 1667 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 TCOF1Q13428 1488 aaKnown RBP-1.35□□□□□ -2.63
COPB1-212ENST00000534771 WDR97A6NE52 1622 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 M0R2P5 195 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 SPINK4O60575 86 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 MT2AP02795 61 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 SPRR1BP22528 89 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 MAGOHP61326 146 aaKnown RBP-1.35□□□□□ -2.63
COPB1-212ENST00000534771 SSBP1Q04837 148 aaKnown RBP-1.35□□□□□ -2.63
COPB1-212ENST00000534771 TMEM97Q5BJF2 176 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 VPS25Q9BRG1 176 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 CCDC144AA2RUR9 1427 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 ZNF609O15014 1411 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 AKAP11Q9UKA4 1901 aa-1.35□□□□□ -2.63
COPB1-212ENST00000534771 KPNA4O00629 521 aaPredicted RBP-1.36□□□□□ -2.63
COPB1-212ENST00000534771 NPFFO15130 113 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 BCE1O60756 84 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 IFNA6P05013 189 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 COX6B1P14854 86 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 OGNP20774 298 aaKnown RBP-1.36□□□□□ -2.63
COPB1-212ENST00000534771 PTMSP20962 102 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 MAXP61244 160 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 OR4S1Q8NGB4 309 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 OR10X1Q8NGY0 326 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 COX7B2Q8TF08 81 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 AP3S1Q92572 193 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 FKBP11Q9NYL4 201 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 DOCK11Q5JSL3 2073 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 KDM3BQ7LBC6 1761 aa-1.36□□□□□ -2.63
COPB1-212ENST00000534771 LRP6O75581 1613 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 ANKRD31Q8N7Z5 1873 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 TRAV1-2A0A0B4J238 106 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 TRBV6-1A0A0K0K1D8 114 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 CXorf51AA0A1B0GTR3 108 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 I3L2K1 104 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 APOA2P02652 100 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 TFF1P04155 84 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 S100A3P33764 101 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 NCALDP61601 193 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 DEFB135Q30KP9 77 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 PIGYQ3MUY2 71 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 SCGB2B2Q4G0G5 96 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 OR2T2Q6IF00 324 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 OR5H6Q8NGV6 325 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 PPDPFLQ8WWR9 84 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 BTF3L4Q96K17 158 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 PYCARDQ9ULZ3 195 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 CRYBG3Q68DQ2 2970 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 PAPPAQ13219 1627 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 IFT172Q9UG01 1749 aa-1.37□□□□□ -2.63
COPB1-212ENST00000534771 ERCC6L2Q5T890 1561 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 PHIPQ8WWQ0 1821 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 WNK3Q9BYP7 1800 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 TRAPPC8Q9Y2L5 1435 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 A0A1B0GW64 132 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 NDUFC2O95298 119 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 C20orf197Q8N268 126 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 PRELID3AQ96N28 172 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 CTNNBIP1Q9NSA3 81 aaPredicted RBP-1.38□□□□□ -2.63
COPB1-212ENST00000534771 PLXNB2O15031 1838 aa-1.38□□□□□ -2.63
COPB1-212ENST00000534771 RANBP2P49792 3224 aaKnown RBP-1.38□□□□□ -2.63
COPB1-212ENST00000534771 NRXN2Q9P2S2 1712 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 SPEGQ15772 3267 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 RIIAD1A6NNX1 92 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 AIPO00170 330 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 FABP2P12104 132 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 OR8B8Q15620 311 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 LIN52Q52LA3 116 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 C3orf33Q6P1S2 294 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 CROCCP2Q86T23 111 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 OR8J2Q8NGG1 315 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 DGCR14Q96DF8 476 aaKnown RBP-1.39□□□□□ -2.63
COPB1-212ENST00000534771 CCDC42Q96M95 316 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 SDF2Q99470 211 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 SIGMAR1Q99720 223 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 RTL8AQ9BWD3 113 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 NMNAT1Q9HAN9 279 aaPredicted RBP-1.39□□□□□ -2.63
COPB1-212ENST00000534771 SCN3BQ9NY72 215 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 NKIRAS1Q9NYS0 192 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 FAM32AQ9Y421 112 aaKnown RBP-1.39□□□□□ -2.63
COPB1-212ENST00000534771 NINQ8N4C6 2090 aa-1.39□□□□□ -2.63
COPB1-212ENST00000534771 ZMYM4Q5VZL5 1548 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 IGHV1-24A0A0C4DH33 117 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 TMEM114B3SHH9 223 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 H3BQV1 296 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 CYBAP13498 195 aa-1.4□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms