RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 RAB14P61106 215 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 SLAQ13239 276 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 RHOHQ15669 191 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 CLLU1Q5K131 121 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 PIK3CD-AS1Q5SR53 167 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 ZNRF2Q8NHG8 242 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 GTSF1Q8WW33 167 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 FAT2Q9NYQ8 4349 aa9.66□□□□□ -0.86
VPS11-205ENST00000534551 GATCO43716 136 aaKnown RBP9.65□□□□□ -0.86
VPS11-205ENST00000534551 ERVFC1-1P60608 527 aa9.65□□□□□ -0.86
VPS11-205ENST00000534551 RPL23P62829 140 aaKnown RBP9.65□□□□□ -0.86
VPS11-205ENST00000534551 ADIRFQ15847 76 aa9.65□□□□□ -0.86
VPS11-205ENST00000534551 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
VPS11-205ENST00000534551 RNF212Q495C1 297 aa9.65□□□□□ -0.86
VPS11-205ENST00000534551 LYZL1Q6UWQ5 148 aa9.65□□□□□ -0.86
VPS11-205ENST00000534551 TRBV6-4A0A1B0GX49 114 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 GAGE12JA6NER3 117 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 RHODO00212 210 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 GAGE1Q13065 139 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 GAGE4Q13068 117 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 GAGE5Q13069 117 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 GAGE13Q4V321 117 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 ZFP2Q6ZN57 461 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 FAM231DQ6ZW35 169 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 ISOC2Q96AB3 205 aa9.64□□□□□ -0.87
VPS11-205ENST00000534551 MRPS16Q9Y3D3 137 aaKnown RBP9.64□□□□□ -0.87
VPS11-205ENST00000534551 XKRY2A2RUG3 117 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 LINC00694P0DN24 101 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 ZNF56Q15929 161 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 LYPD5Q6UWN5 251 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 NEGR1Q7Z3B1 354 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 AP1S3Q96PC3 154 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 PRADC1Q9BSG0 188 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 KRTAP1-5Q9BYS1 174 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 NAT8Q9UHE5 227 aa9.63□□□□□ -0.87
VPS11-205ENST00000534551 EPPK1P58107 5090 aaKnown RBP9.62□□□□□ -0.87
VPS11-205ENST00000534551 MGPP08493 103 aa9.62□□□□□ -0.87
VPS11-205ENST00000534551 TMEM241Q24JQ0 296 aa9.62□□□□□ -0.87
VPS11-205ENST00000534551 SOHLH1Q5JUK2 328 aa9.62□□□□□ -0.87
VPS11-205ENST00000534551 WFDC10BQ8IUB3 73 aa9.62□□□□□ -0.87
VPS11-205ENST00000534551 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
VPS11-205ENST00000534551 KIF25-AS1Q9Y6Z4 181 aa9.62□□□□□ -0.87
VPS11-205ENST00000534551 CIDEAO60543 219 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 LINC00315P59091 139 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 CACNG7P62955 275 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 FAM74A3Q4VXF1 159 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 Q6ZR54 194 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 UPK3BQ9BT76 320 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 SMDT1Q9H4I9 107 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 OSTCQ9NRP0 149 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 V9GYV3 84 aa9.61□□□□□ -0.87
VPS11-205ENST00000534551 A0A1W2PPQ1 181 aa9.6□□□□□ -0.87
VPS11-205ENST00000534551 NTF3P20783 257 aa9.6□□□□□ -0.87
VPS11-205ENST00000534551 EVI2AP22794 236 aa9.6□□□□□ -0.87
VPS11-205ENST00000534551 F2Z2F3 143 aa9.59□□□□□ -0.87
VPS11-205ENST00000534551 ADCYAP1P18509 176 aa9.59□□□□□ -0.87
VPS11-205ENST00000534551 FOXA3P55318 350 aaPredicted RBP9.59□□□□□ -0.87
VPS11-205ENST00000534551 FAM3BP58499 235 aaPredicted RBP9.59□□□□□ -0.87
VPS11-205ENST00000534551 CT83Q5H943 113 aa9.59□□□□□ -0.87
VPS11-205ENST00000534551 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
VPS11-205ENST00000534551 Q9H8V8 135 aa9.59□□□□□ -0.87
VPS11-205ENST00000534551 NBDYA0A0U1RRE5 68 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 HIGD1CA8MV81 97 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 A8MWL6 223 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 F5H697 171 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 SMIM17P0DL12 118 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 TWIST1Q15672 202 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 SUMO4Q6EEV6 95 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 COMMD7Q86VX2 200 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 Q8N3U1 123 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 C15orf54Q8N8G6 183 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 NEXN-AS1Q8NBZ9 246 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 OR10G8Q8NGN5 311 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 TSKUQ8WUA8 353 aa9.58□□□□□ -0.88
VPS11-205ENST00000534551 RAB4BP61018 213 aa9.57□□□□□ -0.88
VPS11-205ENST00000534551 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
VPS11-205ENST00000534551 IGHV3-38A0A0C4DH36 116 aa9.56□□□□□ -0.88
VPS11-205ENST00000534551 RTL8CO15255 209 aa9.56□□□□□ -0.88
VPS11-205ENST00000534551 SIVA1O15304 175 aa9.56□□□□□ -0.88
VPS11-205ENST00000534551 TRGC1P0CF51 173 aa9.56□□□□□ -0.88
VPS11-205ENST00000534551 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
VPS11-205ENST00000534551 TRAV26-2A0A0B4J265 109 aa9.55□□□□□ -0.88
VPS11-205ENST00000534551 UBE2D3P61077 147 aa9.55□□□□□ -0.88
VPS11-205ENST00000534551 UBE2D2P62837 147 aa9.55□□□□□ -0.88
VPS11-205ENST00000534551 NUP35Q8NFH5 326 aa9.55□□□□□ -0.88
VPS11-205ENST00000534551 GTSF1LQ9H1H1 148 aa9.55□□□□□ -0.88
VPS11-205ENST00000534551 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
VPS11-205ENST00000534551 TRBV10-1A0A0K0K1A3 114 aa9.54□□□□□ -0.88
VPS11-205ENST00000534551 M0QY20 66 aa9.54□□□□□ -0.88
VPS11-205ENST00000534551 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
VPS11-205ENST00000534551 OR10J3Q5JRS4 329 aa9.54□□□□□ -0.88
VPS11-205ENST00000534551 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
VPS11-205ENST00000534551 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
VPS11-205ENST00000534551 GFRA4Q9GZZ7 299 aa9.54□□□□□ -0.88
VPS11-205ENST00000534551 TRBV7-3A0A075B6L6 115 aa9.53□□□□□ -0.88
VPS11-205ENST00000534551 TIRAPP58753 221 aa9.53□□□□□ -0.88
VPS11-205ENST00000534551 LELP1Q5T871 98 aa9.53□□□□□ -0.88
VPS11-205ENST00000534551 WDR73Q6P4I2 378 aa9.53□□□□□ -0.88
VPS11-205ENST00000534551 DEFB104AQ8WTQ1 72 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms