RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 SAMD10Q9BYL1 202 aa11□□□□□ -0.65
CCDC180-213ENST00000534189 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 M0R381 172 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 GAGE1Q13065 139 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 GAGE4Q13068 117 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 GAGE5Q13069 117 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 GAGE13Q4V321 117 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 SFRP2Q96HF1 295 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 PGPEP1Q9NXJ5 209 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 GNG13Q9P2W3 67 aa10.99□□□□□ -0.65
CCDC180-213ENST00000534189 INAFM2P0DMQ5 153 aa10.98□□□□□ -0.65
CCDC180-213ENST00000534189 FAM74A4Q5TZK3 123 aa10.98□□□□□ -0.65
CCDC180-213ENST00000534189 UFSP1Q6NVU6 142 aa10.98□□□□□ -0.65
CCDC180-213ENST00000534189 MLST8Q9BVC4 326 aa10.98□□□□□ -0.65
CCDC180-213ENST00000534189 IBA57-AS1B1ANH7 110 aa10.97□□□□□ -0.65
CCDC180-213ENST00000534189 CXCL1P09341 107 aa10.97□□□□□ -0.65
CCDC180-213ENST00000534189 SULT1A2P50226 295 aa10.97□□□□□ -0.65
CCDC180-213ENST00000534189 CCL20P78556 96 aa10.97□□□□□ -0.65
CCDC180-213ENST00000534189 A0A087WTM6 91 aa10.96□□□□□ -0.65
CCDC180-213ENST00000534189 A0A087WWC5 75 aa10.96□□□□□ -0.65
CCDC180-213ENST00000534189 A0A087WWL8 130 aa10.96□□□□□ -0.65
CCDC180-213ENST00000534189 EPM2AB3EWF7 344 aa10.96□□□□□ -0.65
CCDC180-213ENST00000534189 C1QBP02746 253 aa10.96□□□□□ -0.65
CCDC180-213ENST00000534189 RPL35P42766 123 aaKnown RBP10.96□□□□□ -0.65
CCDC180-213ENST00000534189 PRR27Q6MZM9 219 aa10.96□□□□□ -0.65
CCDC180-213ENST00000534189 Q6ZNX1 250 aa10.96□□□□□ -0.65
CCDC180-213ENST00000534189 SLC51BQ86UW2 128 aa10.96□□□□□ -0.65
CCDC180-213ENST00000534189 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
CCDC180-213ENST00000534189 VPS13BQ7Z7G8 4022 aa10.96□□□□□ -0.66
CCDC180-213ENST00000534189 PSCAO43653 123 aa10.95□□□□□ -0.66
CCDC180-213ENST00000534189 IGHV3-30P01768 117 aa10.95□□□□□ -0.66
CCDC180-213ENST00000534189 IGHV3-33P01772 117 aa10.95□□□□□ -0.66
CCDC180-213ENST00000534189 LINC00694P0DN24 101 aa10.95□□□□□ -0.66
CCDC180-213ENST00000534189 IGHV3-30-3P0DP02 117 aa10.95□□□□□ -0.66
CCDC180-213ENST00000534189 IGHV3-30-5P0DP03 117 aa10.95□□□□□ -0.66
CCDC180-213ENST00000534189 RPL19P84098 196 aaKnown RBP10.95□□□□□ -0.66
CCDC180-213ENST00000534189 CDPF1Q6NVV7 123 aa10.95□□□□□ -0.66
CCDC180-213ENST00000534189 C11orf52Q96A22 123 aa10.95□□□□□ -0.66
CCDC180-213ENST00000534189 TRBV10-1A0A0K0K1A3 114 aa10.94□□□□□ -0.66
CCDC180-213ENST00000534189 IFNA1P01562 189 aa10.94□□□□□ -0.66
CCDC180-213ENST00000534189 Q9UF83 564 aa10.93□□□□□ -0.66
CCDC180-213ENST00000534189 SRRM2Q9UQ35 2752 aaKnown RBP10.93□□□□□ -0.66
CCDC180-213ENST00000534189 SNAI2O43623 268 aa10.92□□□□□ -0.66
CCDC180-213ENST00000534189 PDE6DO43924 150 aa10.92□□□□□ -0.66
CCDC180-213ENST00000534189 OR5AL1P0C617 328 aa10.92□□□□□ -0.66
CCDC180-213ENST00000534189 RPL36AP83881 106 aaKnown RBP10.92□□□□□ -0.66
CCDC180-213ENST00000534189 MEF2BQ02080 365 aaPredicted RBP10.92□□□□□ -0.66
CCDC180-213ENST00000534189 SPANXN1Q5VSR9 72 aa10.92□□□□□ -0.66
CCDC180-213ENST00000534189 RPL36ALQ969Q0 106 aaKnown RBP10.92□□□□□ -0.66
CCDC180-213ENST00000534189 DAZAP1Q96EP5 407 aaKnown RBP10.92□□□□□ -0.66
CCDC180-213ENST00000534189 DERL1Q9BUN8 251 aa10.92□□□□□ -0.66
CCDC180-213ENST00000534189 SSBP4Q9BWG4 385 aaPredicted RBP10.92□□□□□ -0.66
CCDC180-213ENST00000534189 Q9HAA7 133 aa10.92□□□□□ -0.66
CCDC180-213ENST00000534189 RAB4BP61018 213 aa10.91□□□□□ -0.66
CCDC180-213ENST00000534189 LAGE3Q14657 143 aa10.91□□□□□ -0.66
CCDC180-213ENST00000534189 CENPWQ5EE01 88 aa10.91□□□□□ -0.66
CCDC180-213ENST00000534189 AKAP14Q86UN6 197 aa10.91□□□□□ -0.66
CCDC180-213ENST00000534189 OR10AG1Q8NH19 301 aa10.91□□□□□ -0.66
CCDC180-213ENST00000534189 TM2D2Q9BX73 214 aa10.91□□□□□ -0.66
CCDC180-213ENST00000534189 TAGLN2P37802 199 aaKnown RBP10.9□□□□□ -0.66
CCDC180-213ENST00000534189 GNG4P50150 75 aa10.9□□□□□ -0.66
CCDC180-213ENST00000534189 TOR2AQ5JU69 321 aa10.9□□□□□ -0.66
CCDC180-213ENST00000534189 SMIM12Q96EX1 92 aa10.9□□□□□ -0.66
CCDC180-213ENST00000534189 MED9Q9NWA0 146 aa10.9□□□□□ -0.66
CCDC180-213ENST00000534189 URGCP-MRPS24S4R325 110 aa10.9□□□□□ -0.66
CCDC180-213ENST00000534189 TRBV7-3A0A075B6L6 115 aa10.89□□□□□ -0.67
CCDC180-213ENST00000534189 TRAV8-3A0A0A6YYJ7 113 aa10.89□□□□□ -0.67
CCDC180-213ENST00000534189 SMIM17P0DL12 118 aa10.89□□□□□ -0.67
CCDC180-213ENST00000534189 BCL2P10415 239 aa10.89□□□□□ -0.67
CCDC180-213ENST00000534189 RPS20P60866 119 aaKnown RBP10.89□□□□□ -0.67
CCDC180-213ENST00000534189 ZNF56Q15929 161 aa10.89□□□□□ -0.67
CCDC180-213ENST00000534189 BIN3Q9NQY0 253 aa10.89□□□□□ -0.67
CCDC180-213ENST00000534189 VAX2Q9UIW0 290 aa10.89□□□□□ -0.67
CCDC180-213ENST00000534189 HMCN2Q8NDA2 5059 aa10.88□□□□□ -0.67
CCDC180-213ENST00000534189 RAB19A4D1S5 217 aa10.88□□□□□ -0.67
CCDC180-213ENST00000534189 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.67
CCDC180-213ENST00000534189 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.88□□□□□ -0.67
CCDC180-213ENST00000534189 OR2D3Q8NGH3 330 aa10.88□□□□□ -0.67
CCDC180-213ENST00000534189 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
CCDC180-213ENST00000534189 hCG_2014768A0A024R1R8 64 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 MUC21A0A0G2JKD1 596 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 MUC21A0A140T8X8 626 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 XKRY2A2RUG3 117 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 F5H697 171 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 IGLV2-8P01709 118 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 UBE2D3P61077 147 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 SSTP61278 116 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 UBE2D2P62837 147 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 KCNIP4Q6PIL6 250 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 DAZ4Q86SG3 579 aaKnown RBP10.87□□□□□ -0.67
CCDC180-213ENST00000534189 C9orf62Q8N4C0 152 aa10.87□□□□□ -0.67
CCDC180-213ENST00000534189 DAZ3Q9NR90 486 aaKnown RBP10.87□□□□□ -0.67
CCDC180-213ENST00000534189 FLG2Q5D862 2391 aaPredicted RBP10.87□□□□□ -0.67
CCDC180-213ENST00000534189 NIT1Q86X76 327 aa10.86□□□□□ -0.67
CCDC180-213ENST00000534189 Q8N3U1 123 aa10.86□□□□□ -0.67
CCDC180-213ENST00000534189 FER1L6-AS1Q8NA97 138 aa10.86□□□□□ -0.67
CCDC180-213ENST00000534189 AP1S3Q96PC3 154 aa10.86□□□□□ -0.67
CCDC180-213ENST00000534189 A0A087WX48 190 aa10.85□□□□□ -0.67
CCDC180-213ENST00000534189 C19orf71A6NCJ1 209 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms