RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910	HIST1H2BH	Q93079	126 aa		4.22	□□□□□ -1.73
CHKA-208	ENST00000533910	LINC00477	Q96M19	166 aa		4.22	□□□□□ -1.73
CHKA-208	ENST00000533910	ODF3	Q96PU9	254 aa		4.22	□□□□□ -1.73
CHKA-208	ENST00000533910	HIST1H2BN	Q99877	126 aa		4.22	□□□□□ -1.73
CHKA-208	ENST00000533910	HIST1H2BM	Q99879	126 aa		4.22	□□□□□ -1.73
CHKA-208	ENST00000533910	GNB1L	Q9BYB4	327 aa		4.22	□□□□□ -1.73
CHKA-208	ENST00000533910	IGKV3-7	A0A075B6H7	116 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910		A8MTW9	85 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	KLLN	B2CW77	178 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910		F5H768	121 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910		K7EP13	123 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	HLA-DQA1	P01909	254 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	FRMD6-AS1	P0C7T7	363 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	TRGC1	P0CF51	173 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	KRTAP10-3	P60369	221 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	RPS20	P60866	119 aa	Known RBP	4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	DEFB114	Q30KQ6	69 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	COA6	Q5JTJ3	125 aa	Known RBP	4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	PRR9	Q5T870	116 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	TMEM61	Q8N0U2	210 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	GATD1	Q8NB37	220 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	CNFN	Q9BYD5	112 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	GOLT1B	Q9Y3E0	138 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910	TRAPPC1	Q9Y5R8	145 aa		4.21	□□□□□ -1.74
CHKA-208	ENST00000533910		A0A0J9YX75	114 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	TMEM189	A5PLL7	270 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	FABP5P3	A8MUU1	101 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	SNURFL	B1AK76	121 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910		F6UB75	175 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	ZNF688	P0C7X2	276 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	IGLC6	P0CF74	106 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	ZNF705D	P0CH99	300 aa	Predicted RBP	4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	ZNF705B	P0CI00	300 aa	Predicted RBP	4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	GZMB	P10144	247 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	DEFB1	P60022	68 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	PAFAH1B2	P68402	229 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	HBB	P68871	147 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	DEFA6	Q01524	100 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	FABP9	Q0Z7S8	132 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	PSMG4	Q5JS54	123 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	GDF5OS	Q5U4N7	250 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	MRPL54	Q6P161	138 aa	Known RBP	4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	FOXI2	Q6ZQN5	318 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	NIT1	Q86X76	327 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	DYNLRB2	Q8TF09	96 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	SELENOK	Q9Y6D0	94 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	WNK1	Q9H4A3	2382 aa		4.2	□□□□□ -1.74
CHKA-208	ENST00000533910	TENM1	Q9UKZ4	2725 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	IGLV5-37	A0A075B6J1	123 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	TRAV21	A0A0B4J279	112 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	IGKV3D-20	A0A0C4DH25	116 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910		A0A1B0GUT8	65 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	OR4C46	A6NHA9	309 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	SPINK4	O60575	86 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	DUSP14	O95147	198 aa	Known RBP	4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	HLA-DRB4	P13762	266 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	LEP	P41159	167 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	TFPI2	P48307	235 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	TAL2	Q16559	108 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	AMTN	Q6UX39	209 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	FER1L6-AS1	Q8NA97	138 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	OR2K2	Q8NGT1	345 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	PGLYRP4	Q96LB8	373 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	HLA-DRB4	X5D2U9	266 aa		4.19	□□□□□ -1.74
CHKA-208	ENST00000533910	AGRN	O00468	2067 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	TEP1	Q99973	2627 aa	Known RBP	4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	TMSB15B	A0A087X1C1	80 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910		A0A1B0GV90	55 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	CYSRT1	A8MQ03	144 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	CRX	O43186	299 aa	Predicted RBP	4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	IGLV1-51	P01701	117 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	S100A8	P05109	93 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	OR5AL1	P0C617	328 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	ARMS2	P0C7Q2	107 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	NUTF2	P61970	127 aa	Known RBP	4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	RPL32	P62910	135 aa	Known RBP	4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	ZNF415	Q09FC8	603 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	GAGE5	Q13069	117 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	GAGE6	Q13070	117 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	RIG	Q13278	110 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	NSUN5P1	Q3KNT7	163 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	DNLZ	Q5SXM8	178 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	EBLN2	Q6P2I7	272 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910		Q6ZQT7	251 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	ZNF493	Q6ZR52	646 aa		4.18	□□□□□ -1.74
CHKA-208	ENST00000533910	ATR	Q13535	2644 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	NIPBL	Q6KC79	2804 aa	eCLIP	4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	IGHV4-4	A0A075B6R2	117 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	C7orf71	A4D174	169 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	RBMY1B	A6NDE4	496 aa	Known RBP	4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	RBMY1E	A6NEQ0	496 aa	Known RBP	4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	SMIM9	A6NGZ8	99 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	IFITM10	A6NMD0	228 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910		F2Z2F3	143 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910		H3BMM0	161 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	APCS	P02743	223 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	GPX1	P07203	203 aa		4.17	□□□□□ -1.74
CHKA-208	ENST00000533910	RBMY1D	P0C7P1	496 aa	Known RBP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms