RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TRAV8-6A0A0B4J262 113 aa8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 LOC100131303A0A0U1RQF7 123 aa8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 GGTLC3B5MD39 225 aa8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 RS1O15537 224 aa8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 S100A2P29034 98 aa8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 SNRPEP62304 92 aaKnown RBP8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 RHOHQ15669 191 aa8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 C11orf21Q9P2W6 132 aa8.4□□□□□ -1.06
CAPRIN1-213ENST00000533562 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
CAPRIN1-213ENST00000533562 RPL7L1Q6DKI1 246 aaKnown RBP8.39□□□□□ -1.07
CAPRIN1-213ENST00000533562 C9orf85Q96MD7 179 aa8.39□□□□□ -1.07
CAPRIN1-213ENST00000533562 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
CAPRIN1-213ENST00000533562 IGHV3-73A0A0B4J1V6 119 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 CTXND1A0A1B0GTU2 59 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 PGPEP1LA6NFU8 196 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 COLCA2A8K830 154 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 FABP5P3A8MUU1 101 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 PSCAO43653 123 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 MGST1P10620 155 aaKnown RBP8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 S100A4P26447 101 aaKnown RBP8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 LINC01556Q5JQF7 62 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 OR10J3Q5JRS4 329 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 DPPA3Q6W0C5 159 aa8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 ZNF471Q9BX82 626 aaPredicted RBP8.38□□□□□ -1.07
CAPRIN1-213ENST00000533562 RNASE3P12724 160 aaKnown RBP8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 PKIAP61925 76 aa8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 RHEBQ15382 184 aa8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 AKR1C8PQ5T2L2 129 aa8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 HIST1H2BAQ96A08 127 aa8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 LINC00479Q96M42 142 aa8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 SMDT1Q9H4I9 107 aa8.37□□□□□ -1.07
CAPRIN1-213ENST00000533562 TRAV34A0A0B4J273 112 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 A8MWV9 139 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 IBA57-AS1B1ANH7 110 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 FUSP35637 526 aaKnown RBP eCLIP8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 UBE2G2P60604 165 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 ZNF726P1Q15940 193 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 LELP1Q5T871 98 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 ZFP2Q6ZN57 461 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 MRPL52Q86TS9 123 aaKnown RBP8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 CBLN2Q8IUK8 224 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 ARL2-SNX15V9GYD0 113 aa8.36□□□□□ -1.07
CAPRIN1-213ENST00000533562 IGKV3D-20A0A0C4DH25 116 aa8.35□□□□□ -1.07
CAPRIN1-213ENST00000533562 EPM2AB3EWF7 344 aa8.35□□□□□ -1.07
CAPRIN1-213ENST00000533562 PEX7O00628 323 aa8.35□□□□□ -1.07
CAPRIN1-213ENST00000533562 GCSHP23434 173 aa8.35□□□□□ -1.07
CAPRIN1-213ENST00000533562 ASIPP42127 132 aa8.35□□□□□ -1.07
CAPRIN1-213ENST00000533562 ANKRD39Q53RE8 183 aa8.35□□□□□ -1.07
CAPRIN1-213ENST00000533562 ZFP30Q9Y2G7 519 aa8.35□□□□□ -1.07
CAPRIN1-213ENST00000533562 B4DEV8 164 aa8.34□□□□□ -1.07
CAPRIN1-213ENST00000533562 FGF8P55075 233 aaPredicted RBP8.34□□□□□ -1.07
CAPRIN1-213ENST00000533562 IL36BQ9NZH7 164 aa8.34□□□□□ -1.07
CAPRIN1-213ENST00000533562 IGHV3-30P01768 117 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 IGHV3-33P01772 117 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 IGHV3-30-3P0DP02 117 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 IGHV3-30-5P0DP03 117 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 RAB5AP20339 215 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 XGP55808 180 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 KRTAP10-1P60331 282 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 SYT8Q8NBV8 401 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 FMC1Q96HJ9 113 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 PARLQ9H300 379 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 Q9HAA7 133 aa8.33□□□□□ -1.08
CAPRIN1-213ENST00000533562 SRRM2Q9UQ35 2752 aaKnown RBP8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 MAP1LC3B2A6NCE7 125 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 LRCOL1A6NCL2 159 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 NDUFS6O75380 124 aaKnown RBP8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 ADCYAP1P18509 176 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 UBE2G1P62253 170 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 LAGE3Q14657 143 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 FAM162BQ5T6X4 162 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 Q6ZSN1 163 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 COX8CQ7Z4L0 72 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 Q86TA4 180 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 NTN5Q8WTR8 489 aaPredicted RBP8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 TM2D2Q9BX73 214 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 MAP1LC3BQ9GZQ8 125 aa8.32□□□□□ -1.08
CAPRIN1-213ENST00000533562 A0A087WWC5 75 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 IGLV5-52A0A0A0MRZ9 124 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 GAGE12JA6NER3 117 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 RHODO00212 210 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 ARMS2P0C7Q2 107 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 FHITP49789 147 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 CRIP1P50238 77 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 GAGE1Q13065 139 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 GAGE4Q13068 117 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 GAGE5Q13069 117 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 GAGE13Q4V321 117 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 CST9LP1Q5W188 147 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 FRZBQ92765 325 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 ZC2HC1AQ96GY0 325 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 CYTL1Q9NRR1 136 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 PHLDA3Q9Y5J5 127 aa8.31□□□□□ -1.08
CAPRIN1-213ENST00000533562 H3BVH4 76 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms