RNA–Protein interactions for RNA: ENST00000533309.5

TRIM3-213, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 1,647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-213ENST00000533309 SMIM15Q7Z3B0 74 aa11.43□□□□□ -0.58
TRIM3-213ENST00000533309 Q8NAQ8 132 aa11.43□□□□□ -0.58
TRIM3-213ENST00000533309 OVOL2Q9BRP0 275 aa11.43□□□□□ -0.58
TRIM3-213ENST00000533309 DPH3P1Q9H4G8 78 aa11.43□□□□□ -0.58
TRIM3-213ENST00000533309 RETNQ9HD89 108 aa11.43□□□□□ -0.58
TRIM3-213ENST00000533309 DNAH9Q9NYC9 4486 aa11.43□□□□□ -0.58
TRIM3-213ENST00000533309 A0A087WWL8 130 aa11.42□□□□□ -0.58
TRIM3-213ENST00000533309 CRYGDP07320 174 aa11.42□□□□□ -0.58
TRIM3-213ENST00000533309 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
TRIM3-213ENST00000533309 TRGV1A0A0A0MS02 117 aa11.42□□□□□ -0.58
TRIM3-213ENST00000533309 IGHV4-28A0A0C4DH34 117 aa11.42□□□□□ -0.58
TRIM3-213ENST00000533309 LGALS9BQ3B8N2 356 aa11.42□□□□□ -0.58
TRIM3-213ENST00000533309 ALKBH7Q9BT30 221 aaPredicted RBP11.42□□□□□ -0.58
TRIM3-213ENST00000533309 NDUFAF3Q9BU61 184 aa11.42□□□□□ -0.58
TRIM3-213ENST00000533309 MIFP14174 115 aa11.41□□□□□ -0.58
TRIM3-213ENST00000533309 SRIP30626 198 aa11.41□□□□□ -0.58
TRIM3-213ENST00000533309 EMP1P54849 157 aa11.41□□□□□ -0.58
TRIM3-213ENST00000533309 SBSPONQ8IVN8 264 aa11.41□□□□□ -0.58
TRIM3-213ENST00000533309 POM121L12Q8N7R1 296 aa11.41□□□□□ -0.58
TRIM3-213ENST00000533309 U3KQK5 164 aa11.41□□□□□ -0.58
TRIM3-213ENST00000533309 A8MWV9 139 aa11.4□□□□□ -0.58
TRIM3-213ENST00000533309 D6R8Y8 96 aa11.4□□□□□ -0.58
TRIM3-213ENST00000533309 SMKR1H3BMG3 65 aa11.4□□□□□ -0.58
TRIM3-213ENST00000533309 GAS8-AS1O95177 125 aa11.4□□□□□ -0.58
TRIM3-213ENST00000533309 CFAP126Q5VTH2 177 aa11.4□□□□□ -0.58
TRIM3-213ENST00000533309 UFSP1Q6NVU6 142 aa11.4□□□□□ -0.58
TRIM3-213ENST00000533309 TRAV26-2A0A0B4J265 109 aa11.39□□□□□ -0.59
TRIM3-213ENST00000533309 NCR2O95944 276 aa11.39□□□□□ -0.59
TRIM3-213ENST00000533309 MGPP08493 103 aa11.39□□□□□ -0.59
TRIM3-213ENST00000533309 DEFB121Q5J5C9 76 aa11.39□□□□□ -0.59
TRIM3-213ENST00000533309 FAM74A4Q5TZK3 123 aa11.39□□□□□ -0.59
TRIM3-213ENST00000533309 MEGF8Q7Z7M0 2845 aa11.38□□□□□ -0.59
TRIM3-213ENST00000533309 DEFB4AO15263 64 aa11.38□□□□□ -0.59
TRIM3-213ENST00000533309 RS1O15537 224 aa11.38□□□□□ -0.59
TRIM3-213ENST00000533309 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
TRIM3-213ENST00000533309 LINC00612Q8N6U2 182 aa11.38□□□□□ -0.59
TRIM3-213ENST00000533309 GATA1P15976 413 aaPredicted RBP11.38□□□□□ -0.59
TRIM3-213ENST00000533309 CKS2P33552 79 aa11.38□□□□□ -0.59
TRIM3-213ENST00000533309 ORMDL3Q8N138 153 aa11.38□□□□□ -0.59
TRIM3-213ENST00000533309 PRKDCP78527 4128 aaKnown RBP11.37□□□□□ -0.59
TRIM3-213ENST00000533309 GAGE12BA1L429 117 aa11.37□□□□□ -0.59
TRIM3-213ENST00000533309 GAGE7O76087 117 aa11.37□□□□□ -0.59
TRIM3-213ENST00000533309 PPBPP02775 128 aa11.37□□□□□ -0.59
TRIM3-213ENST00000533309 GAGE12FP0CL80 117 aa11.37□□□□□ -0.59
TRIM3-213ENST00000533309 GAGE12GP0CL81 117 aa11.37□□□□□ -0.59
TRIM3-213ENST00000533309 GAGE12IP0CL82 117 aa11.37□□□□□ -0.59
TRIM3-213ENST00000533309 C18orf32Q8TCD1 76 aa11.37□□□□□ -0.59
TRIM3-213ENST00000533309 MRAP2Q96G30 205 aa11.37□□□□□ -0.59
TRIM3-213ENST00000533309 NPYP01303 97 aa11.36□□□□□ -0.59
TRIM3-213ENST00000533309 SUMO4Q6EEV6 95 aa11.36□□□□□ -0.59
TRIM3-213ENST00000533309 PRELID3AQ96N28 172 aa11.36□□□□□ -0.59
TRIM3-213ENST00000533309 TM2D3Q9BRN9 247 aa11.36□□□□□ -0.59
TRIM3-213ENST00000533309 COL7A1Q02388 2944 aa11.36□□□□□ -0.59
TRIM3-213ENST00000533309 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 TRAV4A0A0B4J268 109 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 LYRM9A8MSI8 78 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 ZNF56Q15929 161 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 IQCJQ1A5X6 159 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 FAM222AQ5U5X8 452 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 NRACQ8N912 160 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 ZNF479Q96JC4 524 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 DKK2Q9UBU2 259 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 RHODO00212 210 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 Q0VG73 95 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 OR10J3Q5JRS4 329 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 OR4C5Q8NGB2 326 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 MRAPQ8TCY5 172 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 CELA1Q9UNI1 258 aa11.35□□□□□ -0.59
TRIM3-213ENST00000533309 F5H697 171 aa11.34□□□□□ -0.59
TRIM3-213ENST00000533309 NDUFA6P56556 154 aa11.34□□□□□ -0.59
TRIM3-213ENST00000533309 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
TRIM3-213ENST00000533309 Q6ZSN1 163 aa11.34□□□□□ -0.59
TRIM3-213ENST00000533309 RPL39LQ96EH5 51 aaKnown RBP11.34□□□□□ -0.59
TRIM3-213ENST00000533309 C18orf15Q96N68 181 aa11.34□□□□□ -0.59
TRIM3-213ENST00000533309 SPATA25Q9BR10 227 aa11.34□□□□□ -0.59
TRIM3-213ENST00000533309 TRGV2A0A075B6R0 118 aa11.33□□□□□ -0.6
TRIM3-213ENST00000533309 M0QY20 66 aa11.33□□□□□ -0.6
TRIM3-213ENST00000533309 TNFRSF6BO95407 300 aa11.33□□□□□ -0.6
TRIM3-213ENST00000533309 IGHV3-53P01767 116 aa11.33□□□□□ -0.6
TRIM3-213ENST00000533309 DEFB130BP0DP73 79 aa11.33□□□□□ -0.6
TRIM3-213ENST00000533309 DEFB130AP0DP74 79 aa11.33□□□□□ -0.6
TRIM3-213ENST00000533309 LINC00310P59036 64 aa11.33□□□□□ -0.6
TRIM3-213ENST00000533309 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
TRIM3-213ENST00000533309 C11orf68Q9H3H3 251 aaKnown RBP11.32□□□□□ -0.6
TRIM3-213ENST00000533309 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
TRIM3-213ENST00000533309 STAB2Q8WWQ8 2551 aa11.32□□□□□ -0.6
TRIM3-213ENST00000533309 URB1-AS1Q96HZ7 61 aa11.31□□□□□ -0.6
TRIM3-213ENST00000533309 C5orf52A6NGY3 159 aa11.3□□□□□ -0.6
TRIM3-213ENST00000533309 NUPR1O60356 82 aa11.3□□□□□ -0.6
TRIM3-213ENST00000533309 SERF1AO75920 110 aa11.3□□□□□ -0.6
TRIM3-213ENST00000533309 S100A6P06703 90 aa11.3□□□□□ -0.6
TRIM3-213ENST00000533309 SNRPEP62304 92 aaKnown RBP11.3□□□□□ -0.6
TRIM3-213ENST00000533309 BAGE3Q86Y29 109 aa11.3□□□□□ -0.6
TRIM3-213ENST00000533309 Q9UF83 564 aa11.3□□□□□ -0.6
TRIM3-213ENST00000533309 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
TRIM3-213ENST00000533309 P0DMU3 169 aa11.29□□□□□ -0.6
TRIM3-213ENST00000533309 FAM231AP0DMU4 169 aa11.29□□□□□ -0.6
TRIM3-213ENST00000533309 FAM231CP0DMU5 169 aa11.29□□□□□ -0.6
TRIM3-213ENST00000533309 B9D2Q9BPU9 175 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms