RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 HERVK_113P63121 156 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 GTSF1Q8WW33 167 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 IGHV4-30-2A0A087WSY4 118 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 CFHR3Q02985 330 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 MRPL35Q9NZE8 188 aaKnown RBP9.53□□□□□ -0.88
BDNF-218ENST00000533246 TRGV11A0A075B6L2 103 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 SLC25A20O43772 301 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 CR1LQ2VPA4 569 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 GATD1Q8NB37 220 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
BDNF-218ENST00000533246 OR11H6Q8NGC7 330 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 NUP210LQ5VU65 1888 aa9.53□□□□□ -0.88
BDNF-218ENST00000533246 TEX22C9J3V5 150 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 IGHV3-38A0A0C4DH36 116 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 DEFB130BP0DP73 79 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 DEFB130AP0DP74 79 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 DSCR9P59020 149 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 DEFB112Q30KQ8 113 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 Q96MF0 132 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 TP53TG1Q9Y2A0 90 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 Q8N9W7 124 aa9.52□□□□□ -0.89
BDNF-218ENST00000533246 WIPF2Q8TF74 440 aaPredicted RBP9.52□□□□□ -0.89
BDNF-218ENST00000533246 CFHR4Q92496 578 aa9.51□□□□□ -0.89
BDNF-218ENST00000533246 TRAV4A0A0B4J268 109 aa9.51□□□□□ -0.89
BDNF-218ENST00000533246 LINC01548A6NM66 108 aa9.51□□□□□ -0.89
BDNF-218ENST00000533246 DNAL4O96015 105 aa9.51□□□□□ -0.89
BDNF-218ENST00000533246 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
BDNF-218ENST00000533246 LINC00322Q6ZN03 302 aaPredicted RBP9.51□□□□□ -0.89
BDNF-218ENST00000533246 VPS13AQ96RL7 3174 aa9.5□□□□□ -0.89
BDNF-218ENST00000533246 BRK1Q8WUW1 75 aa9.5□□□□□ -0.89
BDNF-218ENST00000533246 IGLV11-55A0A075B6I3 123 aa9.5□□□□□ -0.89
BDNF-218ENST00000533246 IGKV1D-37A0A075B6S9 117 aa9.5□□□□□ -0.89
BDNF-218ENST00000533246 RNASE13Q5GAN3 156 aaKnown RBP9.5□□□□□ -0.89
BDNF-218ENST00000533246 ZNF747Q9BV97 191 aa9.5□□□□□ -0.89
BDNF-218ENST00000533246 BPTFQ12830 3046 aa9.5□□□□□ -0.89
BDNF-218ENST00000533246 SLC25A16P16260 332 aa9.5□□□□□ -0.89
BDNF-218ENST00000533246 ANKRD29Q8N6D5 301 aa9.5□□□□□ -0.89
BDNF-218ENST00000533246 TRBV25-1A0A075B6N4 114 aa9.49□□□□□ -0.89
BDNF-218ENST00000533246 C8orf31Q8N9H6 132 aa9.49□□□□□ -0.89
BDNF-218ENST00000533246 RS1O15537 224 aa9.49□□□□□ -0.89
BDNF-218ENST00000533246 MORN3Q6PF18 240 aaPredicted RBP9.49□□□□□ -0.89
BDNF-218ENST00000533246 PLNP26678 52 aa9.49□□□□□ -0.89
BDNF-218ENST00000533246 H3BMM0 161 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 NDUFA4O00483 81 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 UBE2WQ96B02 151 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 IGF2BP2-AS1Q96M15 143 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 RHODO00212 210 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 TM2D2Q9BX73 214 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 BUB3O43684 328 aa9.48□□□□□ -0.89
BDNF-218ENST00000533246 ADARB2-AS1A8MUL3 147 aa9.47□□□□□ -0.89
BDNF-218ENST00000533246 LGALS9BQ3B8N2 356 aa9.47□□□□□ -0.89
BDNF-218ENST00000533246 LGALS9CQ6DKI2 356 aa9.47□□□□□ -0.89
BDNF-218ENST00000533246 AJUBAQ96IF1 538 aa9.47□□□□□ -0.89
BDNF-218ENST00000533246 IGLC6P0CF74 106 aa9.47□□□□□ -0.89
BDNF-218ENST00000533246 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
BDNF-218ENST00000533246 C2orf91Q6ZV80 131 aa9.47□□□□□ -0.89
BDNF-218ENST00000533246 Q8N8P6 123 aa9.47□□□□□ -0.89
BDNF-218ENST00000533246 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
BDNF-218ENST00000533246 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
BDNF-218ENST00000533246 MYMXA0A1B0GTQ4 84 aa9.46□□□□□ -0.89
BDNF-218ENST00000533246 BRI3O95415 125 aa9.46□□□□□ -0.89
BDNF-218ENST00000533246 S100A7L2Q5SY68 101 aa9.46□□□□□ -0.89
BDNF-218ENST00000533246 IGHV7-4-1A0A0J9YVY3 117 aa9.46□□□□□ -0.9
BDNF-218ENST00000533246 TRBV12-3P01733 135 aa9.46□□□□□ -0.9
BDNF-218ENST00000533246 ATP6V0E2Q8NHE4 81 aa9.46□□□□□ -0.9
BDNF-218ENST00000533246 TINCRA0A1B0GVN0 87 aa9.46□□□□□ -0.9
BDNF-218ENST00000533246 E9PLD3 99 aa9.46□□□□□ -0.9
BDNF-218ENST00000533246 LINC00158P58513 81 aa9.46□□□□□ -0.9
BDNF-218ENST00000533246 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
BDNF-218ENST00000533246 NDUFA7O95182 113 aa9.45□□□□□ -0.9
BDNF-218ENST00000533246 MAP1AP78559 2803 aaPredicted RBP9.45□□□□□ -0.9
BDNF-218ENST00000533246 IGHV1OR15-1A0A075B7D0 117 aa9.45□□□□□ -0.9
BDNF-218ENST00000533246 EIF4EBP1Q13541 118 aaPredicted RBP9.45□□□□□ -0.9
BDNF-218ENST00000533246 KLF5Q13887 457 aaPredicted RBP9.45□□□□□ -0.9
BDNF-218ENST00000533246 UNQ9165/PRO28630Q6UXU0 137 aa9.45□□□□□ -0.9
BDNF-218ENST00000533246 HLA-DRB4P13762 266 aa9.44□□□□□ -0.9
BDNF-218ENST00000533246 NPBQ8NG41 125 aa9.44□□□□□ -0.9
BDNF-218ENST00000533246 HLA-DRB4X5D2U9 266 aa9.44□□□□□ -0.9
BDNF-218ENST00000533246 A0A087WX48 190 aa9.44□□□□□ -0.9
BDNF-218ENST00000533246 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
BDNF-218ENST00000533246 IGLV2-8P01709 118 aa9.44□□□□□ -0.9
BDNF-218ENST00000533246 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
BDNF-218ENST00000533246 C19orf84I3L1E1 186 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 INSP01308 110 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 ATXN8Q156A1 80 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 C1orf195Q5TG92 126 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 LRRC75A-AS1Q8N1F1 130 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 SPANXCQ9NY87 97 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
BDNF-218ENST00000533246 HOXD3P31249 432 aaPredicted RBP9.43□□□□□ -0.9
BDNF-218ENST00000533246 GDF5OSQ5U4N7 250 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 APRG1Q8IVJ8 170 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 ZNRF2Q8NHG8 242 aa9.43□□□□□ -0.9
BDNF-218ENST00000533246 MGAQ8IWI9 3026 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 VWC2LB2RUY7 222 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 LOXL1Q08397 574 aaPredicted RBP9.42□□□□□ -0.9
BDNF-218ENST00000533246 CDSNQ15517 529 aa9.42□□□□□ -0.9
BDNF-218ENST00000533246 RETNQ9HD89 108 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms