RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 ZFP2Q6ZN57 461 aa5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 NEGR1Q7Z3B1 354 aa5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 TRPT1Q86TN4 253 aaKnown RBP5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 MAPKAPK5-AS1Q8N8E1 139 aa5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 RNF152Q8N8N0 203 aa5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 PHLDA1Q8WV24 401 aaPredicted RBP5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 ZNF479Q96JC4 524 aa5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 C9orf85Q96MD7 179 aa5.85□□□□□ -1.47
SOX9-AS1-212ENST00000533232 TRBV7-3A0A075B6L6 115 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 IGHV1OR15-1A0A075B7D0 117 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 A0A1B0GWB2 263 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 IGLL5B9A064 214 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 G3V4G9 280 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 HOXA3O43365 443 aaPredicted RBP5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 LINC00315P59091 139 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 DEFB112Q30KQ8 113 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 SUMO4Q6EEV6 95 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 SCGB1D4Q6XE38 83 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 FOXI2Q6ZQN5 318 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 UBE2E2Q96LR5 201 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 PRADC1Q9BSG0 188 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 TTTY13Q9BZ97 58 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 TP53TG1Q9Y2A0 90 aa5.84□□□□□ -1.47
SOX9-AS1-212ENST00000533232 DCHS2Q6V1P9 2916 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 HIVEP3Q5T1R4 2406 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 IGHV3-16A0A0C4DH30 117 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SDHAF1A6NFY7 115 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 IGIPA6NJ69 53 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 ZNF815PA8K554 130 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 IGHV4-59P01825 116 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SRD5A1P18405 259 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 VPREB3Q9UKI3 123 aa5.83□□□□□ -1.48
SOX9-AS1-212ENST00000533232 TRAV2A0A0B4J234 112 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 C11orf86A6NJI1 115 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 ZNF688P0C7X2 276 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 DEFB1P60022 68 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SRSF9Q13242 221 aaKnown RBP eCLIP5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 ZNF56Q15929 161 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 RRN3P1Q2M238 152 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 NSUN5P1Q3KNT7 163 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 PIK3CD-AS1Q5SR53 167 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 COL6A6A6NMZ7 2263 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 TGFAP01135 160 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 NAA38Q9BRA0 125 aaKnown RBP5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 EDA2RQ9HAV5 297 aa5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 ZNF256Q9Y2P7 627 aaPredicted RBP5.82□□□□□ -1.48
SOX9-AS1-212ENST00000533232 DCHS1Q96JQ0 3298 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 A0A087WWL8 130 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 I3L3M4 83 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SPRY2O43597 315 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 COX6B1P14854 86 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 CRYBA4P53673 196 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 ZNF876PQ49A33 203 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 Q6YL49 198 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 Q8N1Y9 231 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 TEX29Q8N6K0 151 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SPANXB1Q9NS25 103 aaPredicted RBP5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 PEMTQ9UBM1 199 aa5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SPTBN1Q01082 2364 aaKnown RBP5.81□□□□□ -1.48
SOX9-AS1-212ENST00000533232 IGF2RP11717 2491 aa5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 K7ERJ3 54 aa5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 M0QY20 66 aa5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 GHRHP01286 108 aa5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 CRYGDP07320 174 aa5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SYNJ2BPP57105 145 aa5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 RPL24P83731 157 aaKnown RBP5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 FAM74A4Q5TZK3 123 aa5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 NFE4Q86UQ8 179 aa5.8□□□□□ -1.48
SOX9-AS1-212ENST00000533232 IGLV4-69A0A075B6H9 119 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 A8MWV9 139 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 LGALS3P17931 250 aaKnown RBP5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 HOXD3P31249 432 aaPredicted RBP5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SPINK13Q1W4C9 94 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 TMEM95Q3KNT9 176 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 CD300EQ496F6 205 aaPredicted RBP5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 GAGE13Q4V321 117 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 TMEM170BQ5T4T1 132 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 PTH2Q96A98 100 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 MRPL16Q9NX20 251 aaKnown RBP5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 MDFICQ9P1T7 246 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 ABCA2Q9BZC7 2435 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 CACNA1BQ00975 2339 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 SAP30O75446 220 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 TSHBP01222 138 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 FSHBP01225 129 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 Q5PR19 223 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 C20orf203Q8NBC4 194 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 PLEKHB2Q96CS7 222 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 VCX2Q9H322 139 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 JPT2Q9H910 190 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 BEX4Q9NWD9 120 aaPredicted RBP5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 PYGO1Q9Y3Y4 419 aa5.79□□□□□ -1.48
SOX9-AS1-212ENST00000533232 MED13LQ71F56 2210 aa5.78□□□□□ -1.48
SOX9-AS1-212ENST00000533232 NBASA2RRP1 2371 aa5.78□□□□□ -1.48
SOX9-AS1-212ENST00000533232 TRBV20-1A0A075B6N2 111 aa5.78□□□□□ -1.48
SOX9-AS1-212ENST00000533232 TRAV12-2A0A075B6T6 113 aa5.78□□□□□ -1.48
SOX9-AS1-212ENST00000533232 A0A096LNT2 108 aa5.78□□□□□ -1.48
SOX9-AS1-212ENST00000533232 A8MTW9 85 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms