RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 C1orf195Q5TG92 126 aa8.31□□□□□ -1.08
COLCA1-203ENST00000532918 FGF23Q9GZV9 251 aaPredicted RBP8.31□□□□□ -1.08
COLCA1-203ENST00000532918 PTPRQQ9UMZ3 2332 aa8.31□□□□□ -1.08
COLCA1-203ENST00000532918 MALRD1Q5VYJ5 2156 aa8.31□□□□□ -1.08
COLCA1-203ENST00000532918 CREBBPQ92793 2442 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 PRB2P02812 416 aaPredicted RBP8.3□□□□□ -1.08
COLCA1-203ENST00000532918 DOCK9Q9BZ29 2069 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 C11orf45Q8TAV5 145 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 SMIM27A0A1W2PRY6 76 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 IGLL5B9A064 214 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 LY6G6DO95868 133 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
COLCA1-203ENST00000532918 HHLA3Q9XRX5 114 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 KIF26AQ9ULI4 1882 aaPredicted RBP8.3□□□□□ -1.08
COLCA1-203ENST00000532918 IGHV3-30P01768 117 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 IGHV3-33P01772 117 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 BAALC-AS2P0C853 105 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 IGHV3-30-3P0DP02 117 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 IGHV3-30-5P0DP03 117 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 MUSTN1Q8IVN3 82 aa8.3□□□□□ -1.08
COLCA1-203ENST00000532918 A0A0B4J2C4 111 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 RNF183Q96D59 192 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 MRPL36Q9P0J6 103 aaKnown RBP8.29□□□□□ -1.08
COLCA1-203ENST00000532918 CFHR4Q92496 578 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 PCNX1Q96RV3 2341 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 TTC28Q96AY4 2481 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 CFC1P0CG37 223 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 SEC61GP60059 68 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 DEFB125Q8N687 156 aa8.29□□□□□ -1.08
COLCA1-203ENST00000532918 SLC25A29Q8N8R3 303 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 C17orf77Q96MU5 243 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 C2orf16Q68DN1 1984 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 WI2-2373I1.2A0A1W2PRP0 233 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 CYYR1Q96J86 154 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 COX7A2LO14548 114 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 IGKV1-17P01599 117 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 RNASE8Q8TDE3 154 aaKnown RBP8.28□□□□□ -1.08
COLCA1-203ENST00000532918 RITA1Q96K30 269 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 V9GYV3 84 aa8.28□□□□□ -1.08
COLCA1-203ENST00000532918 ETDCA0A1B0GVM5 59 aa8.27□□□□□ -1.08
COLCA1-203ENST00000532918 SMIM9A6NGZ8 99 aa8.27□□□□□ -1.08
COLCA1-203ENST00000532918 ODF3BA8MYP8 253 aa8.27□□□□□ -1.08
COLCA1-203ENST00000532918 ORMDL1Q9P0S3 153 aa8.27□□□□□ -1.09
COLCA1-203ENST00000532918 ABCA1O95477 2261 aa8.27□□□□□ -1.09
COLCA1-203ENST00000532918 FAM240AA0A1B0GVK7 77 aa8.27□□□□□ -1.09
COLCA1-203ENST00000532918 HEATR5AQ86XA9 2040 aa8.27□□□□□ -1.09
COLCA1-203ENST00000532918 TEX22C9J3V5 150 aa8.27□□□□□ -1.09
COLCA1-203ENST00000532918 ZNF726P1Q15940 193 aa8.27□□□□□ -1.09
COLCA1-203ENST00000532918 LYPD6BQ8NI32 183 aa8.27□□□□□ -1.09
COLCA1-203ENST00000532918 TMEM263Q8WUH6 116 aaKnown RBP8.27□□□□□ -1.09
COLCA1-203ENST00000532918 TP53BP1Q12888 1972 aaPredicted RBP8.27□□□□□ -1.09
COLCA1-203ENST00000532918 HIVEP2P31629 2446 aa8.27□□□□□ -1.09
COLCA1-203ENST00000532918 A0A0U1RQV1 116 aa8.26□□□□□ -1.09
COLCA1-203ENST00000532918 COL4A4P53420 1690 aaPredicted RBP8.26□□□□□ -1.09
COLCA1-203ENST00000532918 LGALS9O00182 355 aa8.26□□□□□ -1.09
COLCA1-203ENST00000532918 F8VRH5 84 aa8.26□□□□□ -1.09
COLCA1-203ENST00000532918 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
COLCA1-203ENST00000532918 C9orf47Q6ZRZ4 202 aa8.26□□□□□ -1.09
COLCA1-203ENST00000532918 TMEM61Q8N0U2 210 aa8.26□□□□□ -1.09
COLCA1-203ENST00000532918 MRPL35Q9NZE8 188 aaKnown RBP8.26□□□□□ -1.09
COLCA1-203ENST00000532918 PRO0255Q9UI72 69 aa8.26□□□□□ -1.09
COLCA1-203ENST00000532918 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 ADAMTS9Q9P2N4 1935 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 IGKV3D-7A0A0C4DH55 119 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 J3QQQ9 107 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 NDUFA1O15239 70 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 ZFP2Q6ZN57 461 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 TEN1Q86WV5 123 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.25□□□□□ -1.09
COLCA1-203ENST00000532918 IGKV2-29A2NJV5 120 aaPredicted RBP8.25□□□□□ -1.09
COLCA1-203ENST00000532918 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 TMEM131Q92545 1883 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 IGF1P05019 195 aa8.25□□□□□ -1.09
COLCA1-203ENST00000532918 TRBV7-3A0A075B6L6 115 aa8.24□□□□□ -1.09
COLCA1-203ENST00000532918 WISP2O76076 250 aa8.24□□□□□ -1.09
COLCA1-203ENST00000532918 MAP6D1Q9H9H5 199 aa8.24□□□□□ -1.09
COLCA1-203ENST00000532918 FUSP35637 526 aaKnown RBP eCLIP8.24□□□□□ -1.09
COLCA1-203ENST00000532918 Q6ZVH6 145 aa8.24□□□□□ -1.09
COLCA1-203ENST00000532918 LYRM9A8MSI8 78 aa8.24□□□□□ -1.09
COLCA1-203ENST00000532918 FANCD2OSQ96PS1 177 aa8.24□□□□□ -1.09
COLCA1-203ENST00000532918 CXCL5P42830 114 aa8.23□□□□□ -1.09
COLCA1-203ENST00000532918 MSMPQ1L6U9 139 aa8.23□□□□□ -1.09
COLCA1-203ENST00000532918 C11orf71Q6IPW1 123 aa8.23□□□□□ -1.09
COLCA1-203ENST00000532918 C9JQL5 133 aa8.23□□□□□ -1.09
COLCA1-203ENST00000532918 TRAV4A0A0B4J268 109 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 KIR2DL5BA0A0G2JN68 375 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 KIR2DL5BA0A0G2JPC4 375 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 UBE2AP49459 152 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 C5orf38Q86SI9 138 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 KIR2DL5AQ8N109 375 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 Q8N1Y9 231 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 ESM1Q9NQ30 184 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 A0A0J9YX75 114 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 Q6ZSV7 163 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 LINC00574Q9H8X3 128 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 BDP1A6H8Y1 2624 aa8.22□□□□□ -1.09
COLCA1-203ENST00000532918 NCKAP5O14513 1909 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms