RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 C5orf56Q8N8D9 126 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 SPATA25Q9BR10 227 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 NOTCH2Q04721 2471 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 UBE2D1P51668 147 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 Q8N9W7 124 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 C20orf78Q9BR46 151 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 APRG1Q8IVJ8 170 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 SMIM20Q8N5G0 67 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 PTPRSQ13332 1948 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 K7EP13 123 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 SPTSSBQ8NFR3 76 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 SMAD5-AS1Q9Y6J3 95 aa6.8□□□□□ -1.32
CTNND1-232ENST00000532649 LINC01620Q4KN68 170 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 ZNF664Q8N3J9 261 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 DAZ2Q13117 558 aaKnown RBP6.79□□□□□ -1.32
CTNND1-232ENST00000532649 DAZ4Q86SG3 579 aaKnown RBP6.79□□□□□ -1.32
CTNND1-232ENST00000532649 ZNF843Q8N446 348 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 DAZ3Q9NR90 486 aaKnown RBP6.79□□□□□ -1.32
CTNND1-232ENST00000532649 PSMB8P28062 276 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 PRR20EP86478 221 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 PRR20CP86479 221 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 PRR20DP86480 221 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 PRR20BP86481 221 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 PRR20AP86496 221 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 HIST2H2BCQ6DN03 193 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 AJUBAQ96IF1 538 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 OPRPNQ99935 248 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-232ENST00000532649 MUC22E2RYF6 1773 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-232ENST00000532649 ADCYAP1P18509 176 aa6.79□□□□□ -1.32
CTNND1-232ENST00000532649 IL15RAQ13261 267 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 AMTNQ6UX39 209 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 KMT2EQ8IZD2 1858 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 PRSS57Q6UWY2 283 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 SIRPDQ9H106 197 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 ANKHD1Q8IWZ3 2542 aaKnown RBP6.78□□□□□ -1.32
CTNND1-232ENST00000532649 ETDBQ3ZM63 59 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 HIGD2BQ4VC39 106 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 EML6Q6ZMW3 1958 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 WIPF2Q8TF74 440 aaPredicted RBP6.78□□□□□ -1.32
CTNND1-232ENST00000532649 IGLV11-55A0A075B6I3 123 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 PRSS47A8MTI9 375 aa6.78□□□□□ -1.32
CTNND1-232ENST00000532649 I3L2K1 104 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 K7EIM0 57 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 IGLV1-47P01700 117 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 PLCE1Q9P212 2302 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 DEFB125Q8N687 156 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 KIR2DL5BA0A0G2JN68 375 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 KIR2DL5BA0A0G2JPC4 375 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 A0A1W2PPM0 123 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 H0YGX0 51 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 LYPD6Q86Y78 171 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 KIR2DL5AQ8N109 375 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 DYSFO75923 2080 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 Q0VG73 95 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 IGHV4OR15-8A0A075B7B6 117 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 A0A087WW49 117 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 C22orf34Q6ZV56 151 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 DIRC1Q969H9 104 aa6.77□□□□□ -1.33
CTNND1-232ENST00000532649 POLR3KQ9Y2Y1 108 aaPredicted RBP6.77□□□□□ -1.33
CTNND1-232ENST00000532649 LOXL1Q08397 574 aaPredicted RBP6.76□□□□□ -1.33
CTNND1-232ENST00000532649 ASPHD1Q5U4P2 390 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 ESM1Q9NQ30 184 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 HHLA3Q9XRX5 114 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 CACNA1AO00555 2505 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 ALPK3Q96L96 1907 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 F8VRH5 84 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 LGALS9BQ3B8N2 356 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 PYY3Q5JQD4 70 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 LGALS9CQ6DKI2 356 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 ZNF493Q6ZR52 646 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 C7orf33Q8WU49 177 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 GNRH2O43555 120 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 CXCL5P42830 114 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 ZFP2Q6ZN57 461 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 SND1-IT1Q9HBX3 110 aa6.76□□□□□ -1.33
CTNND1-232ENST00000532649 MRPL35Q9NZE8 188 aaKnown RBP6.75□□□□□ -1.33
CTNND1-232ENST00000532649 LRRC75A-AS1Q8N1F1 130 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 UBE2D4Q9Y2X8 147 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 PTPN13Q12923 2485 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 CTSGP08311 255 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 NPSP0C0P6 89 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 ODF3L1Q8IXM7 274 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-232ENST00000532649 AGPAT4-IT1Q9H0P7 198 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 HIVEP2P31629 2446 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 TNRC6AQ8NDV7 1962 aaKnown RBP6.75□□□□□ -1.33
CTNND1-232ENST00000532649 NCOA6Q14686 2063 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-232ENST00000532649 ATOX1O00244 68 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 MYCNOSP40205 109 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 LMO4P61968 165 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 FAM231DQ6ZW35 169 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 V9GYV3 84 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 MED12LQ86YW9 2145 aa6.75□□□□□ -1.33
CTNND1-232ENST00000532649 TRBV12-3P01733 135 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 A0A0B4J2C4 111 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 DNAJC9-AS1A6NH13 148 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 IGKV1-17P01599 117 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 CFC1BP0CG36 223 aa6.74□□□□□ -1.33
CTNND1-232ENST00000532649 CFC1P0CG37 223 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms