RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 RNF223E7ERA6 249 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 SPRY4Q9C004 299 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 SDK2Q58EX2 2172 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 MARF1Q9Y4F3 1742 aaKnown RBP6.29□□□□□ -1.4
CTNND1-231ENST00000532463 MYO7BQ6PIF6 2116 aa6.29□□□□□ -1.4
CTNND1-231ENST00000532463 A0A0J9YXY3 114 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 K7ENP7 123 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 CRYGDP07320 174 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 YPEL4Q96NS1 127 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 ZNRD1Q9P1U0 126 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 QSER1Q2KHR3 1735 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 TUBGCP6Q96RT7 1819 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 P0DMU3 169 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 FAM231AP0DMU4 169 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 FAM231CP0DMU5 169 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 TDRD15B5MCY1 1934 aaKnown RBP6.28□□□□□ -1.4
CTNND1-231ENST00000532463 TMEM223A0PJW6 202 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 C9orf66Q5T8R8 295 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 Q8TCH9 128 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 IGKV2-24A0A0C4DH68 120 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 TRBV7-6A0A0J9YX20 115 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 FREM3P0C091 2139 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 NOTCH3Q9UM47 2321 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 IGKV1D-37A0A075B6S9 117 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 C3orf84H3BNL1 204 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 C20orf203Q8NBC4 194 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 MSRB1Q9NZV6 116 aa6.28□□□□□ -1.4
CTNND1-231ENST00000532463 SPRY2O43597 315 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 GTSF1Q8WW33 167 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 SIPA1L3O60292 1781 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-231ENST00000532463 KLK5Q9Y337 293 aaPredicted RBP6.27□□□□□ -1.41
CTNND1-231ENST00000532463 TRAV7A0A075B6U4 112 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 C2orf70A6NJV1 201 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 MDFICQ9P1T7 246 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 LRCOL1A6NCL2 159 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 SLPIP03973 132 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 APRG1Q8IVJ8 170 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 CLUHP3Q96NS8 147 aa6.27□□□□□ -1.41
CTNND1-231ENST00000532463 A0A087WZ39 114 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 MRPS12O15235 138 aaKnown RBP6.26□□□□□ -1.41
CTNND1-231ENST00000532463 MED12Q93074 2177 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 NRACQ8N912 160 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 A0A0G2JNJ9 132 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 SPINK6Q6UWN8 80 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 Q8N976 141 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 Q9UFV3 132 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 CCL24O00175 119 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 LY6HO94772 140 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 LY6DQ14210 128 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 FAM30AQ9NZY2 134 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 SCN5AQ14524 2016 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 GP9P14770 177 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 Q6JHZ5 121 aa6.26□□□□□ -1.41
CTNND1-231ENST00000532463 E7EQL1 145 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 PSPHP1O15172 72 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 C17orf58Q2M2W7 97 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 KIAA2026Q5HYC2 2103 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 ZNF706Q9Y5V0 76 aaPredicted RBP6.25□□□□□ -1.41
CTNND1-231ENST00000532463 ZNF407Q9C0G0 2248 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 TNRC6AQ8NDV7 1962 aaKnown RBP6.25□□□□□ -1.41
CTNND1-231ENST00000532463 UBR3Q6ZT12 1888 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 TRBV10-1A0A0K0K1A3 114 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 FOXL2NBQ6ZUU3 175 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 ATAD5Q96QE3 1844 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 EPOPA6NHQ4 379 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 CSRP1P21291 193 aaKnown RBP6.25□□□□□ -1.41
CTNND1-231ENST00000532463 OXLD1Q5BKU9 147 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 ESM1Q9NQ30 184 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
CTNND1-231ENST00000532463 MTCL1Q9Y4B5 1905 aaKnown RBP6.25□□□□□ -1.41
CTNND1-231ENST00000532463 ZNF524Q96C55 264 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 CHD3Q12873 2000 aaKnown RBP6.24□□□□□ -1.41
CTNND1-231ENST00000532463 DOCK7Q96N67 2140 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 CXCL6P80162 114 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 FAM19A5Q7Z5A7 132 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-231ENST00000532463 SIRPDQ9H106 197 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 IBA57-AS1B1ANH7 110 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 TRIAP1O43715 76 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 CTRLP40313 264 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 RBX1P62877 108 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 DOCK4Q8N1I0 1966 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 CASP8AP2Q9UKL3 1982 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 COL11A1P12107 1806 aaPredicted RBP6.24□□□□□ -1.41
CTNND1-231ENST00000532463 XIRP1Q702N8 1843 aaKnown RBP6.24□□□□□ -1.41
CTNND1-231ENST00000532463 Q6ZQY7 126 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 CELA1Q9UNI1 258 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 CFAP126Q5VTH2 177 aa6.24□□□□□ -1.41
CTNND1-231ENST00000532463 ZNF236Q9UL36 1845 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 FLVCR1-AS1Q8TAF5 88 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 LINC00526Q96FQ7 95 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 DHRS4-AS1Q9P1J3 65 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 KAAG1Q9UBP8 84 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 PRO0255Q9UI72 69 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 ZFAND2AQ8N6M9 145 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 WNK2Q9Y3S1 2297 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 UBE2D3P61077 147 aa6.23□□□□□ -1.41
CTNND1-231ENST00000532463 LINC00308Q8TCZ7 52 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms