RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 ATRAIDQ6UW56 229 aa13.65□□□□□ -0.22
FDFT1-220ENST00000531733 ZC2HC1AQ96GY0 325 aa13.65□□□□□ -0.22
FDFT1-220ENST00000531733 ACTR3CQ9C0K3 210 aaPredicted RBP13.65□□□□□ -0.22
FDFT1-220ENST00000531733 Q5BKY6 102 aa13.64□□□□□ -0.23
FDFT1-220ENST00000531733 DNLZQ5SXM8 178 aa13.64□□□□□ -0.23
FDFT1-220ENST00000531733 RHODO00212 210 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 PEX7O00628 323 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 SH2D1AO60880 128 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 OXTP01178 125 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 IFNA7P01567 189 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 MBP02144 154 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 HNRNPA3P51991 378 aaKnown RBP13.63□□□□□ -0.23
FDFT1-220ENST00000531733 SERF2P84101 59 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 OR11H4Q8NGC9 324 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 SFRP2Q96HF1 295 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 AQP10Q96PS8 301 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 TNFSF18Q9UNG2 199 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 ALG5Q9Y673 324 aa13.63□□□□□ -0.23
FDFT1-220ENST00000531733 IGLV2-8P01709 118 aa13.62□□□□□ -0.23
FDFT1-220ENST00000531733 SYT8Q8NBV8 401 aa13.62□□□□□ -0.23
FDFT1-220ENST00000531733 A0A087WX48 190 aa13.61□□□□□ -0.23
FDFT1-220ENST00000531733 TMSB15BA0A087X1C1 80 aa13.61□□□□□ -0.23
FDFT1-220ENST00000531733 M0R381 172 aa13.61□□□□□ -0.23
FDFT1-220ENST00000531733 UBE2D3P61077 147 aa13.61□□□□□ -0.23
FDFT1-220ENST00000531733 UBE2D2P62837 147 aa13.61□□□□□ -0.23
FDFT1-220ENST00000531733 ENHOQ6UWT2 76 aa13.61□□□□□ -0.23
FDFT1-220ENST00000531733 FAM74A7A6NL05 159 aa13.6□□□□□ -0.23
FDFT1-220ENST00000531733 RPL7L1Q6DKI1 246 aaKnown RBP13.6□□□□□ -0.23
FDFT1-220ENST00000531733 SEC11BP0C7V7 166 aa13.59□□□□□ -0.23
FDFT1-220ENST00000531733 DEFA1P59665 94 aa13.59□□□□□ -0.23
FDFT1-220ENST00000531733 DEFA3P59666 94 aa13.59□□□□□ -0.23
FDFT1-220ENST00000531733 CHCHD7Q9BUK0 85 aa13.59□□□□□ -0.23
FDFT1-220ENST00000531733 PHLDA3Q9Y5J5 127 aa13.59□□□□□ -0.23
FDFT1-220ENST00000531733 COX8CQ7Z4L0 72 aa13.58□□□□□ -0.24
FDFT1-220ENST00000531733 DAZAP1Q96EP5 407 aaKnown RBP13.58□□□□□ -0.24
FDFT1-220ENST00000531733 PLA2G2DQ9UNK4 145 aa13.58□□□□□ -0.24
FDFT1-220ENST00000531733 ELOBQ15370 118 aa13.57□□□□□ -0.24
FDFT1-220ENST00000531733 MPV17L2Q567V2 206 aa13.57□□□□□ -0.24
FDFT1-220ENST00000531733 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
FDFT1-220ENST00000531733 TRBV7-3A0A075B6L6 115 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 TRBV10-1A0A0K0K1A3 114 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 CTXND1A0A1B0GTU2 59 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 A6NHS1 94 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 TMEM262E9PQX1 116 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 TPT1P13693 172 aaKnown RBP13.56□□□□□ -0.24
FDFT1-220ENST00000531733 RPL37AP61513 92 aaKnown RBP13.56□□□□□ -0.24
FDFT1-220ENST00000531733 RPL36AP83881 106 aaKnown RBP13.56□□□□□ -0.24
FDFT1-220ENST00000531733 Q0VG73 95 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 ZNF674Q2M3X9 581 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 LINC01559Q495D7 138 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 C15orf54Q8N8G6 183 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 RPL36ALQ969Q0 106 aaKnown RBP13.56□□□□□ -0.24
FDFT1-220ENST00000531733 C1orf43Q9BWL3 253 aa13.56□□□□□ -0.24
FDFT1-220ENST00000531733 USP17L23D6RBM5 183 aa13.55□□□□□ -0.24
FDFT1-220ENST00000531733 HIST1H2BAQ96A08 127 aa13.55□□□□□ -0.24
FDFT1-220ENST00000531733 ZFP30Q9Y2G7 519 aa13.55□□□□□ -0.24
FDFT1-220ENST00000531733 TRBV6-8A0A0A6YYG3 113 aa13.54□□□□□ -0.24
FDFT1-220ENST00000531733 PANO1I0J062 215 aa13.54□□□□□ -0.24
FDFT1-220ENST00000531733 KCNIP4Q6PIL6 250 aa13.54□□□□□ -0.24
FDFT1-220ENST00000531733 ZFP82Q8N141 532 aa13.54□□□□□ -0.24
FDFT1-220ENST00000531733 NEXN-AS1Q8NBZ9 246 aa13.54□□□□□ -0.24
FDFT1-220ENST00000531733 OR10G8Q8NGN5 311 aa13.54□□□□□ -0.24
FDFT1-220ENST00000531733 PRSS1P07477 247 aa13.53□□□□□ -0.24
FDFT1-220ENST00000531733 C14orf177Q52M58 125 aa13.53□□□□□ -0.24
FDFT1-220ENST00000531733 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.53□□□□□ -0.24
FDFT1-220ENST00000531733 HLA-DQA1P01909 254 aa13.52□□□□□ -0.25
FDFT1-220ENST00000531733 ANGP03950 147 aaKnown RBP13.52□□□□□ -0.25
FDFT1-220ENST00000531733 FMC1Q96HJ9 113 aa13.52□□□□□ -0.25
FDFT1-220ENST00000531733 LTAP01374 205 aa13.51□□□□□ -0.25
FDFT1-220ENST00000531733 CRPP02741 224 aa13.51□□□□□ -0.25
FDFT1-220ENST00000531733 RPL19P84098 196 aaKnown RBP13.51□□□□□ -0.25
FDFT1-220ENST00000531733 PRR27Q6MZM9 219 aa13.51□□□□□ -0.25
FDFT1-220ENST00000531733 MED28Q9H204 178 aa13.51□□□□□ -0.25
FDFT1-220ENST00000531733 PTTG1O95997 202 aa13.5□□□□□ -0.25
FDFT1-220ENST00000531733 UBE2G1P62253 170 aa13.5□□□□□ -0.25
FDFT1-220ENST00000531733 KRTAP26-1Q6PEX3 210 aa13.5□□□□□ -0.25
FDFT1-220ENST00000531733 NTM-AS1Q6ZSK4 140 aa13.5□□□□□ -0.25
FDFT1-220ENST00000531733 OR10AG1Q8NH19 301 aa13.5□□□□□ -0.25
FDFT1-220ENST00000531733 NKX6-2Q9C056 277 aaPredicted RBP13.5□□□□□ -0.25
FDFT1-220ENST00000531733 MUC21A0A0G2JKD1 596 aa13.49□□□□□ -0.25
FDFT1-220ENST00000531733 TRBV6-1A0A0K0K1D8 114 aa13.49□□□□□ -0.25
FDFT1-220ENST00000531733 MUC21A0A140T8X8 626 aa13.49□□□□□ -0.25
FDFT1-220ENST00000531733 MT1HL1P0DM35 61 aa13.49□□□□□ -0.25
FDFT1-220ENST00000531733 RAB4BP61018 213 aa13.49□□□□□ -0.25
FDFT1-220ENST00000531733 ZNF56Q15929 161 aa13.49□□□□□ -0.25
FDFT1-220ENST00000531733 CLPSL2Q6UWE3 100 aa13.49□□□□□ -0.25
FDFT1-220ENST00000531733 FXYD6-FXYD2A0A087WZ82 144 aa13.48□□□□□ -0.25
FDFT1-220ENST00000531733 BORCS7-ASMTA0A0B4J1R7 106 aa13.48□□□□□ -0.25
FDFT1-220ENST00000531733 MAP1LC3B2A6NCE7 125 aa13.48□□□□□ -0.25
FDFT1-220ENST00000531733 C9orf163Q8N9P6 203 aa13.48□□□□□ -0.25
FDFT1-220ENST00000531733 INO80EQ8NBZ0 244 aaPredicted RBP13.48□□□□□ -0.25
FDFT1-220ENST00000531733 CHCHD5Q9BSY4 110 aa13.48□□□□□ -0.25
FDFT1-220ENST00000531733 MAP1LC3BQ9GZQ8 125 aa13.48□□□□□ -0.25
FDFT1-220ENST00000531733 AKR1C8PQ5T2L2 129 aa13.47□□□□□ -0.25
FDFT1-220ENST00000531733 GIPP09681 153 aaPredicted RBP13.46□□□□□ -0.25
FDFT1-220ENST00000531733 CST9LP1Q5W188 147 aa13.46□□□□□ -0.25
FDFT1-220ENST00000531733 AKR1C3P42330 323 aa13.45□□□□□ -0.26
FDFT1-220ENST00000531733 FHITP49789 147 aa13.45□□□□□ -0.26
FDFT1-220ENST00000531733 MIAQ16674 131 aa13.45□□□□□ -0.26
FDFT1-220ENST00000531733 DGAT2L7PQ6IED9 249 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms