RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 UBE2DNLQ8IWF7 75 aa9.63□□□□□ -0.87
SMPD1-206ENST00000531336 GTSF1Q8WW33 167 aa9.63□□□□□ -0.87
SMPD1-206ENST00000531336 AP1S3Q96PC3 154 aa9.63□□□□□ -0.87
SMPD1-206ENST00000531336 V9GYV3 84 aa9.63□□□□□ -0.87
SMPD1-206ENST00000531336 A0A096LPF7 62 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 LOC100131303A0A0U1RQF7 123 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 CRYGDP07320 174 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 P0DMU3 169 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 FAM231AP0DMU4 169 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 FAM231CP0DMU5 169 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 GYPEP15421 78 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 SLC25A29Q8N8R3 303 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 TSKUQ8WUA8 353 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 PGLYRP4Q96LB8 373 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 MSRB1Q9NZV6 116 aa9.62□□□□□ -0.87
SMPD1-206ENST00000531336 TMEM218A2RU14 115 aa9.61□□□□□ -0.87
SMPD1-206ENST00000531336 K7EQD1 137 aa9.61□□□□□ -0.87
SMPD1-206ENST00000531336 ADCYAP1P18509 176 aa9.61□□□□□ -0.87
SMPD1-206ENST00000531336 RHOHQ15669 191 aa9.61□□□□□ -0.87
SMPD1-206ENST00000531336 ZNF56Q15929 161 aa9.61□□□□□ -0.87
SMPD1-206ENST00000531336 Q6ZSN1 163 aa9.61□□□□□ -0.87
SMPD1-206ENST00000531336 C14orf178Q8N769 122 aaPredicted RBP9.61□□□□□ -0.87
SMPD1-206ENST00000531336 PRADC1Q9BSG0 188 aa9.61□□□□□ -0.87
SMPD1-206ENST00000531336 VPS13DQ5THJ4 4388 aa9.61□□□□□ -0.87
SMPD1-206ENST00000531336 KMT2CQ8NEZ4 4911 aaKnown RBP9.61□□□□□ -0.87
SMPD1-206ENST00000531336 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
SMPD1-206ENST00000531336 HIGD1CA8MV81 97 aa9.6□□□□□ -0.87
SMPD1-206ENST00000531336 F8W036 122 aa9.6□□□□□ -0.87
SMPD1-206ENST00000531336 SMIM17P0DL12 118 aa9.6□□□□□ -0.87
SMPD1-206ENST00000531336 NTF3P20783 257 aa9.6□□□□□ -0.87
SMPD1-206ENST00000531336 SRIP30626 198 aa9.6□□□□□ -0.87
SMPD1-206ENST00000531336 PNRC1Q12796 327 aaPredicted RBP9.6□□□□□ -0.87
SMPD1-206ENST00000531336 TWIST1Q15672 202 aa9.6□□□□□ -0.87
SMPD1-206ENST00000531336 MRPL23Q16540 153 aaKnown RBP9.6□□□□□ -0.87
SMPD1-206ENST00000531336 MGPP08493 103 aa9.59□□□□□ -0.87
SMPD1-206ENST00000531336 TRGC1P0CF51 173 aa9.59□□□□□ -0.87
SMPD1-206ENST00000531336 WDR73Q6P4I2 378 aa9.59□□□□□ -0.87
SMPD1-206ENST00000531336 BORCS7Q96B45 105 aa9.59□□□□□ -0.87
SMPD1-206ENST00000531336 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
SMPD1-206ENST00000531336 GFRA4Q9GZZ7 299 aa9.59□□□□□ -0.87
SMPD1-206ENST00000531336 F5H697 171 aa9.58□□□□□ -0.88
SMPD1-206ENST00000531336 CCL18P55774 89 aa9.58□□□□□ -0.88
SMPD1-206ENST00000531336 LYSTQ99698 3801 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 FAM231BA6NCW3 169 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 GAGE12JA6NER3 117 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 EVI2AP22794 236 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 FOXA3P55318 350 aaPredicted RBP9.57□□□□□ -0.88
SMPD1-206ENST00000531336 RAB4BP61018 213 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 GAGE1Q13065 139 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 GAGE4Q13068 117 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 GAGE5Q13069 117 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 ESRGQ1W209 222 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 RNF212Q495C1 297 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 GAGE13Q4V321 117 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 NEGR1Q7Z3B1 354 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 LINC00588Q9Y4M8 146 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 KIF25-AS1Q9Y6Z4 181 aa9.57□□□□□ -0.88
SMPD1-206ENST00000531336 A0A1B0GUT8 65 aa9.56□□□□□ -0.88
SMPD1-206ENST00000531336 PPP1R2P9O14990 202 aa9.56□□□□□ -0.88
SMPD1-206ENST00000531336 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
SMPD1-206ENST00000531336 DPH3P1Q9H4G8 78 aa9.56□□□□□ -0.88
SMPD1-206ENST00000531336 Q9UF83 564 aa9.56□□□□□ -0.88
SMPD1-206ENST00000531336 NAT8BQ9UHF3 227 aa9.56□□□□□ -0.88
SMPD1-206ENST00000531336 RYR2Q92736 4967 aa9.55□□□□□ -0.88
SMPD1-206ENST00000531336 HYDINQ4G0P3 5121 aa9.55□□□□□ -0.88
SMPD1-206ENST00000531336 SMIM27A0A1W2PRY6 76 aa9.55□□□□□ -0.88
SMPD1-206ENST00000531336 MT-ND4LP03901 98 aa9.55□□□□□ -0.88
SMPD1-206ENST00000531336 LINC00315P59091 139 aa9.55□□□□□ -0.88
SMPD1-206ENST00000531336 SMIM15Q7Z3B0 74 aa9.55□□□□□ -0.88
SMPD1-206ENST00000531336 SUMO4Q6EEV6 95 aa9.54□□□□□ -0.88
SMPD1-206ENST00000531336 SH2D6Q7Z4S9 175 aa9.54□□□□□ -0.88
SMPD1-206ENST00000531336 MRPS16Q9Y3D3 137 aaKnown RBP9.54□□□□□ -0.88
SMPD1-206ENST00000531336 IGLV2-18A0A075B6J9 118 aa9.53□□□□□ -0.88
SMPD1-206ENST00000531336 TRBV10-1A0A0K0K1A3 114 aa9.53□□□□□ -0.88
SMPD1-206ENST00000531336 LINC00694P0DN24 101 aa9.53□□□□□ -0.88
SMPD1-206ENST00000531336 FAM3BP58499 235 aaPredicted RBP9.53□□□□□ -0.88
SMPD1-206ENST00000531336 RPL36AP83881 106 aaKnown RBP9.53□□□□□ -0.88
SMPD1-206ENST00000531336 RIGQ13278 110 aa9.53□□□□□ -0.88
SMPD1-206ENST00000531336 LYPD5Q6UWN5 251 aa9.53□□□□□ -0.88
SMPD1-206ENST00000531336 ATP6V0E2Q8NHE4 81 aa9.53□□□□□ -0.88
SMPD1-206ENST00000531336 ZNRF2Q8NHG8 242 aa9.53□□□□□ -0.88
SMPD1-206ENST00000531336 RPL36ALQ969Q0 106 aaKnown RBP9.53□□□□□ -0.88
SMPD1-206ENST00000531336 ANAPC16Q96DE5 110 aa9.53□□□□□ -0.88
SMPD1-206ENST00000531336 NEXN-AS1Q8NBZ9 246 aa9.52□□□□□ -0.89
SMPD1-206ENST00000531336 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
SMPD1-206ENST00000531336 DNAH6Q9C0G6 4158 aa9.52□□□□□ -0.89
SMPD1-206ENST00000531336 TRAV26-2A0A0B4J265 109 aa9.51□□□□□ -0.89
SMPD1-206ENST00000531336 H7C1H1 209 aa9.51□□□□□ -0.89
SMPD1-206ENST00000531336 C10orf91Q5T1B1 145 aa9.51□□□□□ -0.89
SMPD1-206ENST00000531336 MRPL54Q6P161 138 aaKnown RBP9.51□□□□□ -0.89
SMPD1-206ENST00000531336 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
SMPD1-206ENST00000531336 M0QY20 66 aa9.5□□□□□ -0.89
SMPD1-206ENST00000531336 M0R2N4 97 aa9.5□□□□□ -0.89
SMPD1-206ENST00000531336 RYR3Q15413 4870 aa9.5□□□□□ -0.89
SMPD1-206ENST00000531336 TRBV7-3A0A075B6L6 115 aa9.49□□□□□ -0.89
SMPD1-206ENST00000531336 CAMPP49913 170 aa9.49□□□□□ -0.89
SMPD1-206ENST00000531336 TIRAPP58753 221 aa9.49□□□□□ -0.89
SMPD1-206ENST00000531336 UBE2D3P61077 147 aa9.49□□□□□ -0.89
SMPD1-206ENST00000531336 UBE2D2P62837 147 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms