RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 ZNF876PQ49A33 203 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 PRR9Q5T870 116 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 FAM222AQ5U5X8 452 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 ATP5L2Q7Z4Y8 100 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 Q8NAQ8 132 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 CLRN3Q8NCR9 226 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 OR4C5Q8NGB2 326 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 RPS10P5Q9NQ39 176 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 GSN-AS1Q9NRJ2 163 aa3.45□□□□□ -1.86
SSBP3-213ENST00000530618 KLK5Q9Y337 293 aaPredicted RBP3.45□□□□□ -1.86
SSBP3-213ENST00000530618 HERC1Q15751 4861 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 AGRNO00468 2067 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 TRAV10A0A0B4J240 114 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 TRAV4A0A0B4J268 109 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 IGKV3D-20A0A0C4DH25 116 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 A0A0J9YWU9 116 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 GAGE12BA1L429 117 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 GRIFINA4D1Z8 144 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 NUPR2A6NF83 97 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 HIGD1CA8MV81 97 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 GNRH2O43555 120 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 SNAI2O43623 268 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 SPINK4O60575 86 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 GAGE7O76087 117 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 IGLV2-8P01709 118 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 GAGE12FP0CL80 117 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 GAGE12GP0CL81 117 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 GAGE12IP0CL82 117 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 DEFB130BP0DP73 79 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 DEFB130AP0DP74 79 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 CTRLP40313 264 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 HBBP68871 147 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 C10orf91Q5T1B1 145 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 RASL11AQ6T310 242 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 SH2D6Q7Z4S9 175 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 RASL10AQ92737 203 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 FRZBQ92765 325 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 FAM210BQ96KR6 192 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 PGLYRP4Q96LB8 373 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 PRADC1Q9BSG0 188 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 SMCO4Q9NRQ5 59 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 DKK2Q9UBU2 259 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 X6R8D5 127 aa3.44□□□□□ -1.86
SSBP3-213ENST00000530618 SMIM27A0A1W2PRY6 76 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 C7orf77A4D0Y5 90 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 F5H697 171 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 MT-ND6P03923 174 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 RBMY1A1P0DJD3 496 aaKnown RBP3.43□□□□□ -1.86
SSBP3-213ENST00000530618 RBMY1CP0DJD4 496 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 CRIP1P50238 77 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 FOXA3P55318 350 aaPredicted RBP3.43□□□□□ -1.86
SSBP3-213ENST00000530618 TCTAP57738 103 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 RAB4BP61018 213 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 KIR3DS1Q14943 382 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 RBMY1FQ15415 496 aaKnown RBP3.43□□□□□ -1.86
SSBP3-213ENST00000530618 ZNF56Q15929 161 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 LYZL1Q6UWQ5 148 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 ZFP2Q6ZN57 461 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 SLC7A5P1Q8MH63 180 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 C15orf53Q8NAA6 179 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 C11orf72Q8NBR9 251 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 C9orf85Q96MD7 179 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 C18orf15Q96N68 181 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 DPH3P1Q9H4G8 78 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 MRPL16Q9NX20 251 aaKnown RBP3.43□□□□□ -1.86
SSBP3-213ENST00000530618 MDFICQ9P1T7 246 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 V9GYV3 84 aa3.43□□□□□ -1.86
SSBP3-213ENST00000530618 IGHV4-4A0A075B6R2 117 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 DEFB131BA0A096LNP1 70 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 TRBV10-1A0A0K0K1A3 114 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 F5H768 121 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 DEFB4AO15263 64 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 TCAPO15273 167 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 PPBPP02775 128 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 MGPP08493 103 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 IGLC6P0CF74 106 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 RNASE3P12724 160 aaKnown RBP3.42□□□□□ -1.86
SSBP3-213ENST00000530618 HTN3P15516 51 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 ADCYAP1P18509 176 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 NTF3P20783 257 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 RPL36AP83881 106 aaKnown RBP3.42□□□□□ -1.86
SSBP3-213ENST00000530618 RHOHQ15669 191 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 FAM74A4Q5TZK3 123 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 LINC00476Q8WZB0 136 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 RPL36ALQ969Q0 106 aaKnown RBP3.42□□□□□ -1.86
SSBP3-213ENST00000530618 SSBP4Q9BWG4 385 aaPredicted RBP3.42□□□□□ -1.86
SSBP3-213ENST00000530618 CNFNQ9BYD5 112 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 SCRT2Q9NQ03 307 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 PRO0255Q9UI72 69 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 MUC4Q99102 2169 aa3.42□□□□□ -1.86
SSBP3-213ENST00000530618 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 TRBV6-4A0A1B0GX49 114 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 H3BNG1 76 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 RS1O15537 224 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 PAX4O43316 350 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 NXPH4O95158 308 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 HLA-DQA1P01909 254 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 GZMBP10144 247 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 CAMPP49913 170 aa3.41□□□□□ -1.86
SSBP3-213ENST00000530618 FAM3BP58499 235 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms