RNA–Protein interactions for RNA: ENST00000529577.5

SF3B2-207, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-207ENST00000529577 CHAC1Q9BUX1 264 aa13.32□□□□□ -0.28
SF3B2-207ENST00000529577 FAM74A7A6NL05 159 aa13.31□□□□□ -0.28
SF3B2-207ENST00000529577 FGF8P55075 233 aaPredicted RBP13.31□□□□□ -0.28
SF3B2-207ENST00000529577 ATRAIDQ6UW56 229 aa13.31□□□□□ -0.28
SF3B2-207ENST00000529577 SFRP2Q96HF1 295 aa13.31□□□□□ -0.28
SF3B2-207ENST00000529577 IGKV2D-24A0A075B6R9 120 aa13.3□□□□□ -0.28
SF3B2-207ENST00000529577 A0A087WWC5 75 aa13.3□□□□□ -0.28
SF3B2-207ENST00000529577 G3V3Q6 166 aa13.3□□□□□ -0.28
SF3B2-207ENST00000529577 MBP02144 154 aa13.3□□□□□ -0.28
SF3B2-207ENST00000529577 HNRNPA3P51991 378 aaKnown RBP13.3□□□□□ -0.28
SF3B2-207ENST00000529577 DEFA1P59665 94 aa13.3□□□□□ -0.28
SF3B2-207ENST00000529577 DEFA3P59666 94 aa13.3□□□□□ -0.28
SF3B2-207ENST00000529577 RBFOX3A6NFN3 312 aa13.29□□□□□ -0.28
SF3B2-207ENST00000529577 FAM74A4Q5TZK3 123 aa13.29□□□□□ -0.28
SF3B2-207ENST00000529577 ENHOQ6UWT2 76 aa13.29□□□□□ -0.28
SF3B2-207ENST00000529577 UBE2WQ96B02 151 aa13.29□□□□□ -0.28
SF3B2-207ENST00000529577 UBE2D3P61077 147 aa13.28□□□□□ -0.28
SF3B2-207ENST00000529577 UBE2D2P62837 147 aa13.28□□□□□ -0.28
SF3B2-207ENST00000529577 TOR2AQ5JU69 321 aa13.28□□□□□ -0.28
SF3B2-207ENST00000529577 TMSB15BA0A087X1C1 80 aa13.27□□□□□ -0.29
SF3B2-207ENST00000529577 CTXND1A0A1B0GTU2 59 aa13.27□□□□□ -0.29
SF3B2-207ENST00000529577 ZNF674Q2M3X9 581 aa13.27□□□□□ -0.29
SF3B2-207ENST00000529577 Q8N976 141 aa13.27□□□□□ -0.29
SF3B2-207ENST00000529577 RHODO00212 210 aa13.26□□□□□ -0.29
SF3B2-207ENST00000529577 IFNA7P01567 189 aa13.26□□□□□ -0.29
SF3B2-207ENST00000529577 LINC01559Q495D7 138 aa13.26□□□□□ -0.29
SF3B2-207ENST00000529577 OR11H4Q8NGC9 324 aa13.26□□□□□ -0.29
SF3B2-207ENST00000529577 M0R381 172 aa13.25□□□□□ -0.29
SF3B2-207ENST00000529577 COX11Q9Y6N1 276 aa13.25□□□□□ -0.29
SF3B2-207ENST00000529577 CYTL1Q9NRR1 136 aa13.24□□□□□ -0.29
SF3B2-207ENST00000529577 PANO1I0J062 215 aa13.23□□□□□ -0.29
SF3B2-207ENST00000529577 LTAP01374 205 aa13.23□□□□□ -0.29
SF3B2-207ENST00000529577 KRTAP26-1Q6PEX3 210 aa13.23□□□□□ -0.29
SF3B2-207ENST00000529577 SYT8Q8NBV8 401 aa13.23□□□□□ -0.29
SF3B2-207ENST00000529577 HIST1H2BAQ96A08 127 aa13.23□□□□□ -0.29
SF3B2-207ENST00000529577 DAZAP1Q96EP5 407 aaKnown RBP13.23□□□□□ -0.29
SF3B2-207ENST00000529577 TRBV6-1A0A0K0K1D8 114 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 RPL19P84098 196 aaKnown RBP13.22□□□□□ -0.29
SF3B2-207ENST00000529577 MPV17L2Q567V2 206 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 FAM162BQ5T6X4 162 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 PRR27Q6MZM9 219 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 NEXN-AS1Q8NBZ9 246 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 OR10G8Q8NGN5 311 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 RMI2Q96E14 147 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 MED28Q9H204 178 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 ZFP30Q9Y2G7 519 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 PHLDA3Q9Y5J5 127 aa13.22□□□□□ -0.29
SF3B2-207ENST00000529577 GIPP09681 153 aaPredicted RBP13.21□□□□□ -0.29
SF3B2-207ENST00000529577 NTM-AS1Q6ZSK4 140 aa13.21□□□□□ -0.29
SF3B2-207ENST00000529577 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.29
SF3B2-207ENST00000529577 CHCHD7Q9BUK0 85 aa13.21□□□□□ -0.29
SF3B2-207ENST00000529577 URGCP-MRPS24S4R325 110 aa13.21□□□□□ -0.29
SF3B2-207ENST00000529577 TRBV7-3A0A075B6L6 115 aa13.2□□□□□ -0.3
SF3B2-207ENST00000529577 TRBV6-8A0A0A6YYG3 113 aa13.2□□□□□ -0.3
SF3B2-207ENST00000529577 TRBV10-1A0A0K0K1A3 114 aa13.2□□□□□ -0.3
SF3B2-207ENST00000529577 IGLV2-8P01709 118 aa13.2□□□□□ -0.3
SF3B2-207ENST00000529577 FHITP49789 147 aa13.2□□□□□ -0.3
SF3B2-207ENST00000529577 FMC1Q96HJ9 113 aa13.2□□□□□ -0.3
SF3B2-207ENST00000529577 A0A087WX48 190 aa13.19□□□□□ -0.3
SF3B2-207ENST00000529577 FXYD6-FXYD2A0A087WZ82 144 aa13.19□□□□□ -0.3
SF3B2-207ENST00000529577 TPT1P13693 172 aaKnown RBP13.19□□□□□ -0.3
SF3B2-207ENST00000529577 MUC21A0A0G2JKD1 596 aa13.18□□□□□ -0.3
SF3B2-207ENST00000529577 MUC21A0A140T8X8 626 aa13.18□□□□□ -0.3
SF3B2-207ENST00000529577 MAP1LC3B2A6NCE7 125 aa13.18□□□□□ -0.3
SF3B2-207ENST00000529577 OXTP01178 125 aa13.18□□□□□ -0.3
SF3B2-207ENST00000529577 PRSS1P07477 247 aa13.18□□□□□ -0.3
SF3B2-207ENST00000529577 RPL36AP83881 106 aaKnown RBP13.18□□□□□ -0.3
SF3B2-207ENST00000529577 ZFP82Q8N141 532 aa13.18□□□□□ -0.3
SF3B2-207ENST00000529577 C15orf54Q8N8G6 183 aa13.18□□□□□ -0.3
SF3B2-207ENST00000529577 RPL36ALQ969Q0 106 aaKnown RBP13.18□□□□□ -0.3
SF3B2-207ENST00000529577 MAP1LC3BQ9GZQ8 125 aa13.18□□□□□ -0.3
SF3B2-207ENST00000529577 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-207ENST00000529577 TNXBP22105 4242 aa13.17□□□□□ -0.3
SF3B2-207ENST00000529577 USP17L23D6RBM5 183 aa13.17□□□□□ -0.3
SF3B2-207ENST00000529577 PTTG1O95997 202 aa13.17□□□□□ -0.3
SF3B2-207ENST00000529577 NKX6-2Q9C056 277 aaPredicted RBP13.17□□□□□ -0.3
SF3B2-207ENST00000529577 KIF25-AS1Q9Y6Z4 181 aa13.17□□□□□ -0.3
SF3B2-207ENST00000529577 BORCS7-ASMTA0A0B4J1R7 106 aa13.16□□□□□ -0.3
SF3B2-207ENST00000529577 SERTAD4-AS1Q5TG53 156 aa13.16□□□□□ -0.3
SF3B2-207ENST00000529577 INO80EQ8NBZ0 244 aaPredicted RBP13.16□□□□□ -0.3
SF3B2-207ENST00000529577 MLST8Q9BVC4 326 aa13.16□□□□□ -0.3
SF3B2-207ENST00000529577 TMEM262E9PQX1 116 aa13.15□□□□□ -0.3
SF3B2-207ENST00000529577 RAB4BP61018 213 aa13.15□□□□□ -0.3
SF3B2-207ENST00000529577 UBE2G1P62253 170 aa13.15□□□□□ -0.3
SF3B2-207ENST00000529577 Q0VG73 95 aa13.15□□□□□ -0.3
SF3B2-207ENST00000529577 ELOBQ15370 118 aa13.15□□□□□ -0.3
SF3B2-207ENST00000529577 AKR1C8PQ5T2L2 129 aa13.15□□□□□ -0.3
SF3B2-207ENST00000529577 SSBP4Q9BWG4 385 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-207ENST00000529577 SNAI2O43623 268 aa13.14□□□□□ -0.31
SF3B2-207ENST00000529577 PAGE4O60829 102 aa13.14□□□□□ -0.31
SF3B2-207ENST00000529577 MT1HL1P0DM35 61 aa13.14□□□□□ -0.31
SF3B2-207ENST00000529577 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
SF3B2-207ENST00000529577 SEC11BP0C7V7 166 aa13.13□□□□□ -0.31
SF3B2-207ENST00000529577 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
SF3B2-207ENST00000529577 PRR34Q9NV39 138 aa13.13□□□□□ -0.31
SF3B2-207ENST00000529577 SCO2A0A1W2PP80 73 aa13.12□□□□□ -0.31
SF3B2-207ENST00000529577 HLA-DQA1P01909 254 aa13.12□□□□□ -0.31
SF3B2-207ENST00000529577 ANGP03950 147 aaKnown RBP13.12□□□□□ -0.31
SF3B2-207ENST00000529577 RPL37AP61513 92 aaKnown RBP13.12□□□□□ -0.31
SF3B2-207ENST00000529577 ZNF56Q15929 161 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms