RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 LINC00336Q6ZUF6 198 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 C14orf178Q8N769 122 aaPredicted RBP11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 NUDT10Q8NFP7 164 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 OR2D3Q8NGH3 330 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 NUDT11Q96G61 164 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 BIN3Q9NQY0 253 aa11.02□□□□□ -0.65
TSPAN4-218ENST00000529566 MUC21A0A0G2JKD1 596 aa11.01□□□□□ -0.65
TSPAN4-218ENST00000529566 MUC21A0A140T8X8 626 aa11.01□□□□□ -0.65
TSPAN4-218ENST00000529566 RHODO00212 210 aa11.01□□□□□ -0.65
TSPAN4-218ENST00000529566 P01737 135 aa11.01□□□□□ -0.65
TSPAN4-218ENST00000529566 RPS20P60866 119 aaKnown RBP11.01□□□□□ -0.65
TSPAN4-218ENST00000529566 EIF5A2Q9GZV4 153 aaKnown RBP11.01□□□□□ -0.65
TSPAN4-218ENST00000529566 PKD1P98161 4303 aa11□□□□□ -0.65
TSPAN4-218ENST00000529566 A0A1B0GVY2 172 aa11□□□□□ -0.65
TSPAN4-218ENST00000529566 A0A1W2PPQ1 181 aa11□□□□□ -0.65
TSPAN4-218ENST00000529566 SIVA1O15304 175 aa11□□□□□ -0.65
TSPAN4-218ENST00000529566 SRP19P09132 144 aaKnown RBP11□□□□□ -0.65
TSPAN4-218ENST00000529566 FAM74A4Q5TZK3 123 aa11□□□□□ -0.65
TSPAN4-218ENST00000529566 TTC32Q5I0X7 151 aa10.99□□□□□ -0.65
TSPAN4-218ENST00000529566 C6orf223Q8N319 242 aa10.99□□□□□ -0.65
TSPAN4-218ENST00000529566 RNASE7Q9H1E1 156 aaKnown RBP10.99□□□□□ -0.65
TSPAN4-218ENST00000529566 KIF25-AS1Q9Y6Z4 181 aa10.99□□□□□ -0.65
TSPAN4-218ENST00000529566 PRSS29PA6NIE9 313 aa10.98□□□□□ -0.65
TSPAN4-218ENST00000529566 C9JQL5 133 aa10.98□□□□□ -0.65
TSPAN4-218ENST00000529566 SPANXN1Q5VSR9 72 aa10.98□□□□□ -0.65
TSPAN4-218ENST00000529566 WFDC10BQ8IUB3 73 aa10.98□□□□□ -0.65
TSPAN4-218ENST00000529566 FER1L6-AS1Q8NA97 138 aa10.98□□□□□ -0.65
TSPAN4-218ENST00000529566 LY96Q9Y6Y9 160 aa10.98□□□□□ -0.65
TSPAN4-218ENST00000529566 PKHD1P08F94 4074 aa10.98□□□□□ -0.65
TSPAN4-218ENST00000529566 DNAH11Q96DT5 4516 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 GAGE12JA6NER3 117 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 CEBPGP53567 150 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 LINC00315P59091 139 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 SSTP61278 116 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 GAGE1Q13065 139 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 GAGE4Q13068 117 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 GAGE5Q13069 117 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 GAGE13Q4V321 117 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 SOHLH1Q5JUK2 328 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 ATP6V0E2Q8NHE4 81 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 GTSF1LQ9H1H1 148 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 MSRB1Q9NZV6 116 aa10.97□□□□□ -0.65
TSPAN4-218ENST00000529566 XKRY2A2RUG3 117 aa10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 F2Z2F3 143 aa10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 DNAH10OSP0CZ25 163 aa10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 RAB4BP61018 213 aa10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 SRSF3P84103 164 aaKnown RBP10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 LYZL1Q6UWQ5 148 aa10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 SMIM7Q9BQ49 75 aa10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 TPPP3Q9BW30 176 aa10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
TSPAN4-218ENST00000529566 BTF3P20290 206 aaKnown RBP10.95□□□□□ -0.66
TSPAN4-218ENST00000529566 FAM231DQ6ZW35 169 aa10.95□□□□□ -0.66
TSPAN4-218ENST00000529566 LINC01551Q86U37 167 aa10.95□□□□□ -0.66
TSPAN4-218ENST00000529566 TRBV10-1A0A0K0K1A3 114 aa10.94□□□□□ -0.66
TSPAN4-218ENST00000529566 CTRLP40313 264 aa10.94□□□□□ -0.66
TSPAN4-218ENST00000529566 CACNG7P62955 275 aa10.94□□□□□ -0.66
TSPAN4-218ENST00000529566 LELP1Q5T871 98 aa10.94□□□□□ -0.66
TSPAN4-218ENST00000529566 WDR73Q6P4I2 378 aa10.94□□□□□ -0.66
TSPAN4-218ENST00000529566 GTSF1Q8WW33 167 aa10.94□□□□□ -0.66
TSPAN4-218ENST00000529566 CNFNQ9BYD5 112 aa10.94□□□□□ -0.66
TSPAN4-218ENST00000529566 ZNF727A8MUV8 499 aa10.93□□□□□ -0.66
TSPAN4-218ENST00000529566 TNP2Q05952 138 aa10.93□□□□□ -0.66
TSPAN4-218ENST00000529566 OR10G8Q8NGN5 311 aa10.93□□□□□ -0.66
TSPAN4-218ENST00000529566 DYNC1H1Q14204 4646 aaKnown RBP10.92□□□□□ -0.66
TSPAN4-218ENST00000529566 K7EP13 123 aa10.92□□□□□ -0.66
TSPAN4-218ENST00000529566 NTF3P20783 257 aa10.92□□□□□ -0.66
TSPAN4-218ENST00000529566 Q6ZRN7 208 aaPredicted RBP10.92□□□□□ -0.66
TSPAN4-218ENST00000529566 AP1S3Q96PC3 154 aa10.92□□□□□ -0.66
TSPAN4-218ENST00000529566 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 TRAV8-6A0A0B4J262 113 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 IGHV3-38A0A0C4DH36 116 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 GATCO43716 136 aaKnown RBP10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 UBE2D3P61077 147 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 UBE2D2P62837 147 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 PEA15Q15121 130 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 ZNF56Q15929 161 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 FAM74A3Q4VXF1 159 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 LINC01556Q5JQF7 62 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 SMDT1Q9H4I9 107 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 TNFRSF18Q9Y5U5 241 aa10.91□□□□□ -0.66
TSPAN4-218ENST00000529566 TRAV9-2A0A087WT02 112 aa10.9□□□□□ -0.66
TSPAN4-218ENST00000529566 EVI2AP22794 236 aa10.9□□□□□ -0.66
TSPAN4-218ENST00000529566 FOXA3P55318 350 aaPredicted RBP10.9□□□□□ -0.66
TSPAN4-218ENST00000529566 ERVFC1-1P60608 527 aa10.9□□□□□ -0.66
TSPAN4-218ENST00000529566 CT83Q5H943 113 aa10.9□□□□□ -0.66
TSPAN4-218ENST00000529566 OR10J3Q5JRS4 329 aa10.9□□□□□ -0.66
TSPAN4-218ENST00000529566 F5H697 171 aa10.89□□□□□ -0.67
TSPAN4-218ENST00000529566 M0QY20 66 aa10.89□□□□□ -0.67
TSPAN4-218ENST00000529566 SMIM17P0DL12 118 aa10.89□□□□□ -0.67
TSPAN4-218ENST00000529566 RPL36AP83881 106 aaKnown RBP10.89□□□□□ -0.67
TSPAN4-218ENST00000529566 TMEM241Q24JQ0 296 aa10.89□□□□□ -0.67
TSPAN4-218ENST00000529566 RPL36ALQ969Q0 106 aaKnown RBP10.89□□□□□ -0.67
TSPAN4-218ENST00000529566 OSTCQ9NRP0 149 aa10.89□□□□□ -0.67
TSPAN4-218ENST00000529566 A0A087WWC5 75 aa10.88□□□□□ -0.67
TSPAN4-218ENST00000529566 A8MWL6 223 aa10.88□□□□□ -0.67
TSPAN4-218ENST00000529566 ISOC2Q96AB3 205 aa10.88□□□□□ -0.67
TSPAN4-218ENST00000529566 TRGC1P0CF51 173 aa10.87□□□□□ -0.67
TSPAN4-218ENST00000529566 RPL23P62829 140 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms