RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NUP35Q8NFH5 326 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 MUC7Q8TAX7 377 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 PGLYRP4Q96LB8 373 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.5
SSBP3-211ENST00000528787 MUC4Q99102 2169 aa5.65□□□□□ -1.51
SSBP3-211ENST00000528787 F5H697 171 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 MT-ND6P03923 174 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 NANOS2P60321 138 aaKnown RBP5.64□□□□□ -1.51
SSBP3-211ENST00000528787 RHOHQ15669 191 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 C12orf74Q32Q52 190 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 TMEM97Q5BJF2 176 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 CFAP126Q5VTH2 177 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 DMRTA1Q5VZB9 504 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 Q6ZQT7 251 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 OR10AG1Q8NH19 301 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 SVIPQ8NHG7 77 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 PHLDA1Q8WV24 401 aaPredicted RBP5.64□□□□□ -1.51
SSBP3-211ENST00000528787 TMEM191AQ9H0A3 160 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 SMCO4Q9NRQ5 59 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 HHLA3Q9XRX5 114 aa5.64□□□□□ -1.51
SSBP3-211ENST00000528787 PAX4O43316 350 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 PPBPP02775 128 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 GZMBP10144 247 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 ZNF56Q15929 161 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 MRPL23Q16540 153 aaKnown RBP5.63□□□□□ -1.51
SSBP3-211ENST00000528787 FAM74A4Q5TZK3 123 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 CEMP1Q6PRD7 247 aaPredicted RBP5.63□□□□□ -1.51
SSBP3-211ENST00000528787 Q6ZTC4 211 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 GTSF1Q8WW33 167 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 MRAP2Q96G30 205 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 DNAJC30Q96LL9 226 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 CELA1Q9UNI1 258 aa5.63□□□□□ -1.51
SSBP3-211ENST00000528787 TRAV26-1A0A087WT03 109 aa5.62□□□□□ -1.51
SSBP3-211ENST00000528787 TCAPO15273 167 aa5.62□□□□□ -1.51
SSBP3-211ENST00000528787 IGHV3-53P01767 116 aa5.62□□□□□ -1.51
SSBP3-211ENST00000528787 HLA-DQA1P01909 254 aa5.62□□□□□ -1.51
SSBP3-211ENST00000528787 PRM2P04554 102 aa5.62□□□□□ -1.51
SSBP3-211ENST00000528787 HTN3P15516 51 aa5.62□□□□□ -1.51
SSBP3-211ENST00000528787 RPL36AP83881 106 aaKnown RBP5.62□□□□□ -1.51
SSBP3-211ENST00000528787 RPL36ALQ969Q0 106 aaKnown RBP5.62□□□□□ -1.51
SSBP3-211ENST00000528787 LAMTOR2Q9Y2Q5 125 aa5.62□□□□□ -1.51
SSBP3-211ENST00000528787 ICOSQ9Y6W8 199 aa5.62□□□□□ -1.51
SSBP3-211ENST00000528787 K7EQD1 137 aa5.61□□□□□ -1.51
SSBP3-211ENST00000528787 MGPP08493 103 aa5.61□□□□□ -1.51
SSBP3-211ENST00000528787 SRIP30626 198 aa5.61□□□□□ -1.51
SSBP3-211ENST00000528787 CRYBA4P53673 196 aa5.61□□□□□ -1.51
SSBP3-211ENST00000528787 FAM3BP58499 235 aaPredicted RBP5.61□□□□□ -1.51
SSBP3-211ENST00000528787 PKIAP61925 76 aa5.61□□□□□ -1.51
SSBP3-211ENST00000528787 SMAGPQ0VAQ4 97 aa5.61□□□□□ -1.51
SSBP3-211ENST00000528787 C14orf178Q8N769 122 aaPredicted RBP5.61□□□□□ -1.51
SSBP3-211ENST00000528787 TNFRSF18Q9Y5U5 241 aa5.61□□□□□ -1.51
SSBP3-211ENST00000528787 COL7A1Q02388 2944 aa5.61□□□□□ -1.51
SSBP3-211ENST00000528787 TRBV7-3A0A075B6L6 115 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 TRBV24-1A0A075B6N3 115 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 A0A087WWL8 130 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 IGLL5B9A064 214 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 PHOX2AO14813 284 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 CRYGDP07320 174 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 P0DMU3 169 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 FAM231AP0DMU4 169 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 FAM231CP0DMU5 169 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 GATA1P15976 413 aaPredicted RBP5.6□□□□□ -1.51
SSBP3-211ENST00000528787 BTF3P20290 206 aaKnown RBP5.6□□□□□ -1.51
SSBP3-211ENST00000528787 G0S2P27469 103 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 CAMPP49913 170 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 CCL18P55774 89 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 FHL2Q14192 279 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 MRPL54Q6P161 138 aaKnown RBP5.6□□□□□ -1.51
SSBP3-211ENST00000528787 NEGR1Q7Z3B1 354 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 DAZ4Q86SG3 579 aaKnown RBP5.6□□□□□ -1.51
SSBP3-211ENST00000528787 GATD1Q8NB37 220 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 ZNF479Q96JC4 524 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 GNB1LQ9BYB4 327 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 DAZ3Q9NR90 486 aaKnown RBP5.6□□□□□ -1.51
SSBP3-211ENST00000528787 STAB2Q8WWQ8 2551 aa5.6□□□□□ -1.51
SSBP3-211ENST00000528787 NACAE9PAV3 2078 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 K7EP13 123 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 EVI2AP22794 236 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 SSTP61278 116 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 FAM104BQ5XKR9 115 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 ZNF575Q86XF7 245 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 ORMDL3Q8N138 153 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 POM121L12Q8N7R1 296 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 SLC25A29Q8N8R3 303 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 NIT2Q9NQR4 276 aa5.59□□□□□ -1.51
SSBP3-211ENST00000528787 TENM3Q9P273 2699 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 MUC21A0A0G2JKD1 596 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 MUC21A0A140T8X8 626 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 A0A1B0GXF2 115 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 K7EMI3 77 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 NUDT3O95989 172 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 GYPEP15421 78 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 CKS2P33552 79 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 TIRAPP58753 221 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 UFSP1Q6NVU6 142 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 TMEM88Q6PEY1 159 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 C20orf78Q9BR46 151 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 KIF25-AS1Q9Y6Z4 181 aa5.58□□□□□ -1.52
SSBP3-211ENST00000528787 URGCP-MRPS24S4R325 110 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms