RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 GATA1P15976 413 aaPredicted RBP6.24□□□□□ -1.41
CMTM1-210ENST00000528441 ERVFC1-1P60608 527 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 SSTP61278 116 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 GAGE1Q13065 139 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 GAGE4Q13068 117 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 GAGE5Q13069 117 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 PEA15Q15121 130 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 GAGE13Q4V321 117 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 SPATA12Q7Z6I5 190 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 BAGE2Q86Y30 109 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 WFDC10BQ8IUB3 73 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 SLC25A29Q8N8R3 303 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 C9orf85Q96MD7 179 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 MANBALQ9NQG1 85 aa6.24□□□□□ -1.41
CMTM1-210ENST00000528441 A0A1B0GVY2 172 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 RHODO00212 210 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 CRYGDP07320 174 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 RNASE3P12724 160 aaKnown RBP6.23□□□□□ -1.41
CMTM1-210ENST00000528441 KCNIP4Q6PIL6 250 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 ZFP82Q8N141 532 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 C10orf126Q8N4M7 172 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 ATP6V0E2Q8NHE4 81 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 DAZAP1Q96EP5 407 aaKnown RBP6.23□□□□□ -1.41
CMTM1-210ENST00000528441 TPPP3Q9BW30 176 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 KRTAP1-5Q9BYS1 174 aa6.23□□□□□ -1.41
CMTM1-210ENST00000528441 A0A087WWL8 130 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 TRBV6-4A0A1B0GX49 114 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 LTAP01374 205 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 IGHV3-30P01768 117 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 IGHV3-33P01772 117 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 SMIM17P0DL12 118 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 IGHV3-30-3P0DP02 117 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 IGHV3-30-5P0DP03 117 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 MED14OSP0DP75 135 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 ZNF56Q15929 161 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 SPANXN1Q5VSR9 72 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 PARLQ9H300 379 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 Q9HAA7 133 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 IL36BQ9NZH7 164 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 URGCP-MRPS24S4R325 110 aa6.22□□□□□ -1.41
CMTM1-210ENST00000528441 IGHV3-38A0A0C4DH36 116 aa6.21□□□□□ -1.42
CMTM1-210ENST00000528441 RBFOX3A6NFN3 312 aa6.21□□□□□ -1.42
CMTM1-210ENST00000528441 RPL19P84098 196 aaKnown RBP6.21□□□□□ -1.42
CMTM1-210ENST00000528441 SVBPQ8N300 66 aa6.21□□□□□ -1.42
CMTM1-210ENST00000528441 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.21□□□□□ -1.42
CMTM1-210ENST00000528441 JPT2Q9H910 190 aa6.21□□□□□ -1.42
CMTM1-210ENST00000528441 MSRB1Q9NZV6 116 aa6.21□□□□□ -1.42
CMTM1-210ENST00000528441 DNAH2Q9P225 4427 aa6.21□□□□□ -1.42
CMTM1-210ENST00000528441 TRBV6-1A0A0K0K1D8 114 aa6.2□□□□□ -1.42
CMTM1-210ENST00000528441 F5H697 171 aa6.2□□□□□ -1.42
CMTM1-210ENST00000528441 SNAPINO95295 136 aa6.2□□□□□ -1.42
CMTM1-210ENST00000528441 BTF3P20290 206 aaKnown RBP6.2□□□□□ -1.42
CMTM1-210ENST00000528441 RPL35P42766 123 aaKnown RBP6.2□□□□□ -1.42
CMTM1-210ENST00000528441 CRIP1P50238 77 aa6.2□□□□□ -1.42
CMTM1-210ENST00000528441 ZNF674Q2M3X9 581 aa6.2□□□□□ -1.42
CMTM1-210ENST00000528441 GTSF1LQ9H1H1 148 aa6.2□□□□□ -1.42
CMTM1-210ENST00000528441 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
CMTM1-210ENST00000528441 HECTD4Q9Y4D8 3996 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 MUC21A0A0G2JKD1 596 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 MUC21A0A140T8X8 626 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 TMEM250H0YL14 139 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 MGPP08493 103 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 GNG4P50150 75 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 CEBPGP53567 150 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 RPL36AP83881 106 aaKnown RBP6.19□□□□□ -1.42
CMTM1-210ENST00000528441 CENPWQ5EE01 88 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 LELP1Q5T871 98 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 ZFP2Q6ZN57 461 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 RPL36ALQ969Q0 106 aaKnown RBP6.19□□□□□ -1.42
CMTM1-210ENST00000528441 PTH2Q96A98 100 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 SAMD10Q9BYL1 202 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 DNAH17Q9UFH2 4485 aa6.19□□□□□ -1.42
CMTM1-210ENST00000528441 XKRY2A2RUG3 117 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 F8W036 122 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 K7EP13 123 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 PDE6DO43924 150 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 APOC3P02656 99 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 SRP19P09132 144 aaKnown RBP6.18□□□□□ -1.42
CMTM1-210ENST00000528441 DNAH10OSP0CZ25 163 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 ADCYAP1P18509 176 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 CCL20P78556 96 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 SRSF3P84103 164 aaKnown RBP6.18□□□□□ -1.42
CMTM1-210ENST00000528441 FAM74A3Q4VXF1 159 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 C14orf178Q8N769 122 aaPredicted RBP6.18□□□□□ -1.42
CMTM1-210ENST00000528441 EIF5A2Q9GZV4 153 aaKnown RBP6.18□□□□□ -1.42
CMTM1-210ENST00000528441 BIN3Q9NQY0 253 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 VAX2Q9UIW0 290 aa6.18□□□□□ -1.42
CMTM1-210ENST00000528441 C9JQL5 133 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 TMEM262E9PQX1 116 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 P01737 135 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 BCL2P10415 239 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 RPS20P60866 119 aaKnown RBP6.17□□□□□ -1.42
CMTM1-210ENST00000528441 MEF2BQ02080 365 aaPredicted RBP6.17□□□□□ -1.42
CMTM1-210ENST00000528441 PIK3CD-AS1Q5SR53 167 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 OR2D3Q8NGH3 330 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 OR10AG1Q8NH19 301 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 SFRP2Q96HF1 295 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 AP1S3Q96PC3 154 aa6.17□□□□□ -1.42
CMTM1-210ENST00000528441 DERL1Q9BUN8 251 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms