RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 LOC100131303A0A0U1RQF7 123 aa8.94□□□□□ -0.98
SCN3B-205ENST00000528267 LY6G6CO95867 125 aa8.94□□□□□ -0.98
SCN3B-205ENST00000528267 GATA1P15976 413 aaPredicted RBP8.94□□□□□ -0.98
SCN3B-205ENST00000528267 S100PP25815 95 aa8.94□□□□□ -0.98
SCN3B-205ENST00000528267 LGALS9CQ6DKI2 356 aa8.94□□□□□ -0.98
SCN3B-205ENST00000528267 OR4C5Q8NGB2 326 aa8.94□□□□□ -0.98
SCN3B-205ENST00000528267 A0A096LPF7 62 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 M0R381 172 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 GATCO43716 136 aaKnown RBP8.93□□□□□ -0.98
SCN3B-205ENST00000528267 NUDT3O95989 172 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 P01737 135 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 KCNIP4Q6PIL6 250 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 DAZAP1Q96EP5 407 aaKnown RBP8.93□□□□□ -0.98
SCN3B-205ENST00000528267 YPEL4Q96NS1 127 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 Q9UF83 564 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 URGCP-MRPS24S4R325 110 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 V9GYV3 84 aa8.93□□□□□ -0.98
SCN3B-205ENST00000528267 COLCA2A8K830 154 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 CRYGDP07320 174 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 ELOBQ15370 118 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 PIK3CD-AS1Q5SR53 167 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 GTSF1Q8WW33 167 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 IMMP2LQ96T52 175 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 RPP21Q9H633 154 aaKnown RBP8.92□□□□□ -0.98
SCN3B-205ENST00000528267 MSRB1Q9NZV6 116 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 PRO0255Q9UI72 69 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 HHLA3Q9XRX5 114 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 PHLDA3Q9Y5J5 127 aa8.92□□□□□ -0.98
SCN3B-205ENST00000528267 A0A087WWL8 130 aa8.91□□□□□ -0.98
SCN3B-205ENST00000528267 TRGV4A0A0C4DH28 118 aa8.91□□□□□ -0.98
SCN3B-205ENST00000528267 H3BNG1 76 aa8.91□□□□□ -0.98
SCN3B-205ENST00000528267 FER1L6-AS1Q8NA97 138 aa8.91□□□□□ -0.98
SCN3B-205ENST00000528267 DNAH17Q9UFH2 4485 aa8.91□□□□□ -0.98
SCN3B-205ENST00000528267 FAT2Q9NYQ8 4349 aa8.91□□□□□ -0.98
SCN3B-205ENST00000528267 TGIF2-C20orf24A0A0A6YYL0 155 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 A8MWV9 139 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 K7EQD1 137 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 PAX4O43316 350 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
SCN3B-205ENST00000528267 SSTP61278 116 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 ZFP82Q8N141 532 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 SLC25A29Q8N8R3 303 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 LINC00588Q9Y4M8 146 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 KIF25-AS1Q9Y6Z4 181 aa8.9□□□□□ -0.98
SCN3B-205ENST00000528267 CTRLP40313 264 aa8.89□□□□□ -0.99
SCN3B-205ENST00000528267 FAM3BP58499 235 aaPredicted RBP8.89□□□□□ -0.99
SCN3B-205ENST00000528267 LINC00315P59091 139 aa8.89□□□□□ -0.99
SCN3B-205ENST00000528267 ESRGQ1W209 222 aa8.89□□□□□ -0.99
SCN3B-205ENST00000528267 CT83Q5H943 113 aa8.89□□□□□ -0.99
SCN3B-205ENST00000528267 LYZL1Q6UWQ5 148 aa8.89□□□□□ -0.99
SCN3B-205ENST00000528267 C14orf178Q8N769 122 aaPredicted RBP8.89□□□□□ -0.99
SCN3B-205ENST00000528267 SYT8Q8NBV8 401 aa8.89□□□□□ -0.99
SCN3B-205ENST00000528267 TPPP3Q9BW30 176 aa8.89□□□□□ -0.99
SCN3B-205ENST00000528267 TRBV24-1A0A075B6N3 115 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 TRAV9-1A0A075B6T8 112 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 A0A1W2PPQ1 181 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 LINC00694P0DN24 101 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 GYPEP15421 78 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 RAB5AP20339 215 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 FAM74A4Q5TZK3 123 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 ZFP2Q6ZN57 461 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 BTF3L4Q96K17 158 aa8.88□□□□□ -0.99
SCN3B-205ENST00000528267 TRBV6-4A0A1B0GX49 114 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 SMIM27A0A1W2PRY6 76 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 A8MWL6 223 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 P0DMU3 169 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 FAM231AP0DMU4 169 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 FAM231CP0DMU5 169 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 SPANXN1Q5VSR9 72 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 TSKUQ8WUA8 353 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 CNFNQ9BYD5 112 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 ICOSQ9Y6W8 199 aa8.87□□□□□ -0.99
SCN3B-205ENST00000528267 SLAQ13239 276 aa8.86□□□□□ -0.99
SCN3B-205ENST00000528267 ZNRF2Q8NHG8 242 aa8.86□□□□□ -0.99
SCN3B-205ENST00000528267 TMA7Q9Y2S6 64 aaKnown RBP8.86□□□□□ -0.99
SCN3B-205ENST00000528267 EPPK1P58107 5090 aaKnown RBP8.85□□□□□ -0.99
SCN3B-205ENST00000528267 CIDEAO60543 219 aa8.85□□□□□ -0.99
SCN3B-205ENST00000528267 NTF3P20783 257 aa8.85□□□□□ -0.99
SCN3B-205ENST00000528267 RPS10P46783 165 aaKnown RBP8.85□□□□□ -0.99
SCN3B-205ENST00000528267 FOXA3P55318 350 aaPredicted RBP8.85□□□□□ -0.99
SCN3B-205ENST00000528267 RHOHQ15669 191 aa8.85□□□□□ -0.99
SCN3B-205ENST00000528267 GFRA4Q9GZZ7 299 aa8.85□□□□□ -0.99
SCN3B-205ENST00000528267 NAT8BQ9UHF3 227 aa8.85□□□□□ -0.99
SCN3B-205ENST00000528267 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
SCN3B-205ENST00000528267 FAM231BA6NCW3 169 aa8.84□□□□□ -0.99
SCN3B-205ENST00000528267 RHODO00212 210 aa8.84□□□□□ -0.99
SCN3B-205ENST00000528267 EVI2AP22794 236 aa8.84□□□□□ -0.99
SCN3B-205ENST00000528267 CACNG7P62955 275 aa8.84□□□□□ -0.99
SCN3B-205ENST00000528267 LYPD5Q6UWN5 251 aa8.84□□□□□ -0.99
SCN3B-205ENST00000528267 PGLYRP4Q96LB8 373 aa8.84□□□□□ -0.99
SCN3B-205ENST00000528267 DNAH11Q96DT5 4516 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 IGLV2-18A0A075B6J9 118 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 GAGE12JA6NER3 117 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 HIGD1CA8MV81 97 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 F2Z2F3 143 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 SRIP30626 198 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 GAGE1Q13065 139 aa8.83□□□□□ -1
SCN3B-205ENST00000528267 GAGE4Q13068 117 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms