RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SDHAF1A6NFY7 115 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 TEX22C9J3V5 150 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 NDUFS5O43920 106 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 IGLV1-47P01700 117 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 LINC00574Q9H8X3 128 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 VPREB3Q9UKI3 123 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 DEFB130BP0DP73 79 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 DEFB130AP0DP74 79 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 DAZAP2Q15038 168 aaPredicted RBP5.61□□□□□ -1.51
CTNND1-218ENST00000528232 FAM167A-AS1Q96KT0 104 aa5.61□□□□□ -1.51
CTNND1-218ENST00000528232 DOCK11Q5JSL3 2073 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 C2orf70A6NJV1 201 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 PRB2P02812 416 aaPredicted RBP5.6□□□□□ -1.51
CTNND1-218ENST00000528232 ASPHD1Q5U4P2 390 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 SLC25A29Q8N8R3 303 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 TRBV6-1A0A0K0K1D8 114 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 CFHR4Q92496 578 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 YPEL4Q96NS1 127 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 IGKV1-17P01599 117 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 IGLC6P0CF74 106 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 AGPAT4-IT1Q9H0P7 198 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 XCL2Q9UBD3 114 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 CHKB-CPT1BH3BT56 60 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 NXPH4O95158 308 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 DEFB112Q30KQ8 113 aa5.6□□□□□ -1.51
CTNND1-218ENST00000528232 CSDC2Q9Y534 153 aaKnown RBP5.6□□□□□ -1.51
CTNND1-218ENST00000528232 DOCK7Q96N67 2140 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 SEC61GP60059 68 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 Q6ZPA2 131 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 NDUFA11Q86Y39 141 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 MLST8Q9BVC4 326 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 RPL18AQ02543 176 aaKnown RBP5.59□□□□□ -1.51
CTNND1-218ENST00000528232 FOXE3Q13461 319 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 LINC00526Q96FQ7 95 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 TRAV12-2A0A075B6T6 113 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 C11orf86A6NJI1 115 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 LGALS9O00182 355 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 CTSGP08311 255 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 UBE2BP63146 152 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 Q8N9W7 124 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 NOTCH3Q9UM47 2321 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 IGHV4-61A0A0C4DH41 118 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 RS1O15537 224 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 FUSP35637 526 aaKnown RBP eCLIP5.59□□□□□ -1.51
CTNND1-218ENST00000528232 Q8N7P7 452 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 C5orf56Q8N8D9 126 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 Q8NA96 180 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 RMI2Q96E14 147 aa5.59□□□□□ -1.51
CTNND1-218ENST00000528232 IGKV3D-7A0A0C4DH55 119 aa5.59□□□□□ -1.52
CTNND1-218ENST00000528232 A0A0U1RQV1 116 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 WISP2O76076 250 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 IGHV4-59P01825 116 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 IGHV3-16A0A0C4DH30 117 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 CGB3P0DN86 165 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 CGB7P0DN87 165 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 EIF4EBP1Q13541 118 aaPredicted RBP5.58□□□□□ -1.52
CTNND1-218ENST00000528232 ZNRF2Q8NHG8 242 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 PRORYQ9H606 182 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 RIF1Q5UIP0 2472 aaKnown RBP5.58□□□□□ -1.52
CTNND1-218ENST00000528232 IGHV4-38-2P0DP08 117 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 SIRPDQ9H106 197 aa5.58□□□□□ -1.52
CTNND1-218ENST00000528232 IGKV1OR2-108A0A075B7D4 117 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 CCDC179H3BU77 68 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 TCL1BO95988 128 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 TRBV12-3P01733 135 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 IGHV4-30-2A0A087WSY4 118 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 J3QKU1 62 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 TMEM256-PLSCR3K7ERE1 68 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 PROP1O75360 226 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 TIMM17AQ99595 171 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 GPR179Q6PRD1 2367 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 LINC00694P0DN24 101 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
CTNND1-218ENST00000528232 DEFB113Q30KQ7 82 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 TECTAO75443 2155 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 FSTL3O95633 263 aa5.57□□□□□ -1.52
CTNND1-218ENST00000528232 ZFP36P26651 326 aaKnown RBP5.57□□□□□ -1.52
CTNND1-218ENST00000528232 PCNX3Q9H6A9 2034 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 EML6Q6ZMW3 1958 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 IGHV3-38A0A0C4DH36 116 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 E7EUB6 86 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 CFHR3Q02985 330 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 ODF1Q14990 250 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 GTF3C1Q12789 2109 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 BRWD1-AS2P59051 145 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 ACACAQ13085 2346 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 COL5A1P20908 1838 aaPredicted RBP5.56□□□□□ -1.52
CTNND1-218ENST00000528232 TMEM89A2RUT3 159 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 PCNX2A6NKB5 2137 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 GNRH2O43555 120 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 UFSP1Q6NVU6 142 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 ZNF295-AS1Q8N0V1 137 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 RNF152Q8N8N0 203 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 BAALCQ8WXS3 180 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 FANCD2OSQ96PS1 177 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 NCOA6Q14686 2063 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms