RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
CNKSR1-211ENST00000528001 OR10AG1Q8NH19 301 aa9.05□□□□□ -0.96
CNKSR1-211ENST00000528001 RNASE7Q9H1E1 156 aaKnown RBP9.05□□□□□ -0.96
CNKSR1-211ENST00000528001 OSTCQ9NRP0 149 aa9.05□□□□□ -0.96
CNKSR1-211ENST00000528001 NAT8Q9UHE5 227 aa9.05□□□□□ -0.96
CNKSR1-211ENST00000528001 LINC00588Q9Y4M8 146 aa9.05□□□□□ -0.96
CNKSR1-211ENST00000528001 A8MWL6 223 aa9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 C9JQL5 133 aa9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 GYPEP15421 78 aa9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 SRSF3P84103 164 aaKnown RBP9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 ESRGQ1W209 222 aa9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 SOHLH1Q5JUK2 328 aa9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 ZNRF2Q8NHG8 242 aa9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 AP1S3Q96PC3 154 aa9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 GFRA4Q9GZZ7 299 aa9.04□□□□□ -0.96
CNKSR1-211ENST00000528001 DNAH6Q9C0G6 4158 aa9.03□□□□□ -0.96
CNKSR1-211ENST00000528001 TRBV10-1A0A0K0K1A3 114 aa9.03□□□□□ -0.96
CNKSR1-211ENST00000528001 GATCO43716 136 aaKnown RBP9.03□□□□□ -0.96
CNKSR1-211ENST00000528001 ERVFC1-1P60608 527 aa9.03□□□□□ -0.96
CNKSR1-211ENST00000528001 RAB4BP61018 213 aa9.03□□□□□ -0.96
CNKSR1-211ENST00000528001 SAMD10Q9BYL1 202 aa9.03□□□□□ -0.96
CNKSR1-211ENST00000528001 JPT2Q9H910 190 aa9.03□□□□□ -0.96
CNKSR1-211ENST00000528001 NACAE9PAV3 2078 aa9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 LINC00694P0DN24 101 aa9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 GZMBP10144 247 aa9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 RPL23P62829 140 aaKnown RBP9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 LYPD5Q6UWN5 251 aa9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 LYZL1Q6UWQ5 148 aa9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 C15orf54Q8N8G6 183 aa9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 ISOC2Q96AB3 205 aa9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 KIF25-AS1Q9Y6Z4 181 aa9.02□□□□□ -0.97
CNKSR1-211ENST00000528001 KMT2AQ03164 3969 aa9.01□□□□□ -0.97
CNKSR1-211ENST00000528001 K7EP13 123 aa9.01□□□□□ -0.97
CNKSR1-211ENST00000528001 TRGC1P0CF51 173 aa9.01□□□□□ -0.97
CNKSR1-211ENST00000528001 BTF3P20290 206 aaKnown RBP9.01□□□□□ -0.97
CNKSR1-211ENST00000528001 UQCC3Q6UW78 93 aa9.01□□□□□ -0.97
CNKSR1-211ENST00000528001 Q6ZR54 194 aa9.01□□□□□ -0.97
CNKSR1-211ENST00000528001 TSKUQ8WUA8 353 aa9.01□□□□□ -0.97
CNKSR1-211ENST00000528001 A0A087WWL8 130 aa9□□□□□ -0.97
CNKSR1-211ENST00000528001 IGHV3-73A0A0B4J1V6 119 aa9□□□□□ -0.97
CNKSR1-211ENST00000528001 SMIM17P0DL12 118 aa9□□□□□ -0.97
CNKSR1-211ENST00000528001 FAM74A4Q5TZK3 123 aa9□□□□□ -0.97
CNKSR1-211ENST00000528001 OR10G8Q8NGN5 311 aa9□□□□□ -0.97
CNKSR1-211ENST00000528001 GTSF1Q8WW33 167 aa9□□□□□ -0.97
CNKSR1-211ENST00000528001 TPPP3Q9BW30 176 aa9□□□□□ -0.97
CNKSR1-211ENST00000528001 Q9H8V8 135 aa9□□□□□ -0.97
CNKSR1-211ENST00000528001 NTF3P20783 257 aa8.99□□□□□ -0.97
CNKSR1-211ENST00000528001 LINC00315P59091 139 aa8.99□□□□□ -0.97
CNKSR1-211ENST00000528001 PNRC1Q12796 327 aaPredicted RBP8.99□□□□□ -0.97
CNKSR1-211ENST00000528001 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
CNKSR1-211ENST00000528001 Q6ZSN1 163 aa8.99□□□□□ -0.97
CNKSR1-211ENST00000528001 V9GYV3 84 aa8.99□□□□□ -0.97
CNKSR1-211ENST00000528001 LOC100131303A0A0U1RQF7 123 aa8.98□□□□□ -0.97
CNKSR1-211ENST00000528001 NBDYA0A0U1RRE5 68 aa8.98□□□□□ -0.97
CNKSR1-211ENST00000528001 ADIRFQ15847 76 aa8.98□□□□□ -0.97
CNKSR1-211ENST00000528001 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
CNKSR1-211ENST00000528001 ATP6V0E2Q8NHE4 81 aa8.98□□□□□ -0.97
CNKSR1-211ENST00000528001 GTSF1LQ9H1H1 148 aa8.98□□□□□ -0.97
CNKSR1-211ENST00000528001 MUC21A0A0G2JKD1 596 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 MUC21A0A140T8X8 626 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 H7C1H1 209 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 SIVA1O15304 175 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 RPL36AP83881 106 aaKnown RBP8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 ZNF56Q15929 161 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 FRZBQ92765 325 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 RPL36ALQ969Q0 106 aaKnown RBP8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 BORCS7Q96B45 105 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 DPH3P1Q9H4G8 78 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 MSRB1Q9NZV6 116 aa8.97□□□□□ -0.97
CNKSR1-211ENST00000528001 TRBV7-3A0A075B6L6 115 aa8.96□□□□□ -0.98
CNKSR1-211ENST00000528001 A0A087WWC5 75 aa8.96□□□□□ -0.98
CNKSR1-211ENST00000528001 HIGD1CA8MV81 97 aa8.96□□□□□ -0.98
CNKSR1-211ENST00000528001 TWIST1Q15672 202 aa8.96□□□□□ -0.98
CNKSR1-211ENST00000528001 LELP1Q5T871 98 aa8.96□□□□□ -0.98
CNKSR1-211ENST00000528001 A0A1B0GUT8 65 aa8.95□□□□□ -0.98
CNKSR1-211ENST00000528001 PPP1R2P9O14990 202 aa8.95□□□□□ -0.98
CNKSR1-211ENST00000528001 EVI2AP22794 236 aa8.95□□□□□ -0.98
CNKSR1-211ENST00000528001 UBE2D3P61077 147 aa8.95□□□□□ -0.98
CNKSR1-211ENST00000528001 UBE2D2P62837 147 aa8.95□□□□□ -0.98
CNKSR1-211ENST00000528001 SMIM15Q7Z3B0 74 aa8.95□□□□□ -0.98
CNKSR1-211ENST00000528001 DNAJC30Q96LL9 226 aa8.95□□□□□ -0.98
CNKSR1-211ENST00000528001 NAT8BQ9UHF3 227 aa8.95□□□□□ -0.98
CNKSR1-211ENST00000528001 IGLV2-18A0A075B6J9 118 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 SMIM27A0A1W2PRY6 76 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 LINC00862A6NCI5 91 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 GAGE12JA6NER3 117 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 F5H697 171 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 M0QY20 66 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 DNAH10OSP0CZ25 163 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 GAGE1Q13065 139 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 GAGE4Q13068 117 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 GAGE5Q13069 117 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 GAGE13Q4V321 117 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 LINC00336Q6ZUF6 198 aa8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.94□□□□□ -0.98
CNKSR1-211ENST00000528001 TRAV9-2A0A087WT02 112 aa8.93□□□□□ -0.98
CNKSR1-211ENST00000528001 TRAV8-6A0A0B4J262 113 aa8.93□□□□□ -0.98
CNKSR1-211ENST00000528001 A0A1B0GW15 77 aa8.93□□□□□ -0.98
CNKSR1-211ENST00000528001 SSTP61278 116 aa8.93□□□□□ -0.98
CNKSR1-211ENST00000528001 TMEM97Q5BJF2 176 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms