RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 MED9Q9NWA0 146 aa17.89■□□□□ 0.45
TSPAN4-217ENST00000527644 KIAA1109Q2LD37 5005 aa17.89■□□□□ 0.45
TSPAN4-217ENST00000527644 A0A087WWL8 130 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 IGHV3-38A0A0C4DH36 116 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 GAGE12JA6NER3 117 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 GNG4P50150 75 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 GAGE1Q13065 139 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 GAGE4Q13068 117 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 GAGE5Q13069 117 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 GAGE13Q4V321 117 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 LELP1Q5T871 98 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 C10orf126Q8N4M7 172 aa17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 C14orf178Q8N769 122 aaPredicted RBP17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 SSBP4Q9BWG4 385 aaPredicted RBP17.88■□□□□ 0.45
TSPAN4-217ENST00000527644 RAB19A4D1S5 217 aa17.87■□□□□ 0.45
TSPAN4-217ENST00000527644 SNAI2O43623 268 aa17.87■□□□□ 0.45
TSPAN4-217ENST00000527644 IGLV2-8P01709 118 aa17.87■□□□□ 0.45
TSPAN4-217ENST00000527644 LINC00694P0DN24 101 aa17.87■□□□□ 0.45
TSPAN4-217ENST00000527644 BLOC1S1P78537 153 aa17.87■□□□□ 0.45
TSPAN4-217ENST00000527644 OR10J3Q5JRS4 329 aa17.87■□□□□ 0.45
TSPAN4-217ENST00000527644 ALKAL2Q6UX46 152 aa17.87■□□□□ 0.45
TSPAN4-217ENST00000527644 HERC2O95714 4834 aa17.87■□□□□ 0.45
TSPAN4-217ENST00000527644 A0A1B0GVG6 124 aa17.86■□□□□ 0.45
TSPAN4-217ENST00000527644 OR5AL1P0C617 328 aa17.86■□□□□ 0.45
TSPAN4-217ENST00000527644 OR10AG1Q8NH19 301 aa17.86■□□□□ 0.45
TSPAN4-217ENST00000527644 DAZAP1Q96EP5 407 aaKnown RBP17.86■□□□□ 0.45
TSPAN4-217ENST00000527644 MSRB1Q9NZV6 116 aa17.86■□□□□ 0.45
TSPAN4-217ENST00000527644 TNFRSF18Q9Y5U5 241 aa17.86■□□□□ 0.45
TSPAN4-217ENST00000527644 LINC01556Q5JQF7 62 aa17.85■□□□□ 0.45
TSPAN4-217ENST00000527644 Q9UF83 564 aa17.85■□□□□ 0.45
TSPAN4-217ENST00000527644 SPANXN1Q5VSR9 72 aa17.83■□□□□ 0.44
TSPAN4-217ENST00000527644 BIN3Q9NQY0 253 aa17.83■□□□□ 0.44
TSPAN4-217ENST00000527644 C19orf71A6NCJ1 209 aa17.82■□□□□ 0.44
TSPAN4-217ENST00000527644 C16orf90A8MZG2 172 aa17.82■□□□□ 0.44
TSPAN4-217ENST00000527644 RPS20P60866 119 aaKnown RBP17.82■□□□□ 0.44
TSPAN4-217ENST00000527644 SPATA12Q7Z6I5 190 aa17.82■□□□□ 0.44
TSPAN4-217ENST00000527644 TRBV20OR9-2A0A075B6H5 130 aa17.81■□□□□ 0.44
TSPAN4-217ENST00000527644 TRBV10-1A0A0K0K1A3 114 aa17.81■□□□□ 0.44
TSPAN4-217ENST00000527644 NKX2-5P52952 324 aaPredicted RBP17.81■□□□□ 0.44
TSPAN4-217ENST00000527644 OR2D3Q8NGH3 330 aa17.8■□□□□ 0.44
TSPAN4-217ENST00000527644 LYPD6BQ8NI32 183 aa17.8■□□□□ 0.44
TSPAN4-217ENST00000527644 A0A087WWC5 75 aa17.79■□□□□ 0.44
TSPAN4-217ENST00000527644 MUC21A0A0G2JKD1 596 aa17.79■□□□□ 0.44
TSPAN4-217ENST00000527644 MUC21A0A140T8X8 626 aa17.79■□□□□ 0.44
TSPAN4-217ENST00000527644 RAB4BP61018 213 aa17.79■□□□□ 0.44
TSPAN4-217ENST00000527644 P01737 135 aa17.78■□□□□ 0.44
TSPAN4-217ENST00000527644 XKRY2A2RUG3 117 aa17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 RBFOX3A6NFN3 312 aa17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 IBA57-AS1B1ANH7 110 aa17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 IGLC6P0CF74 106 aa17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 GZMBP10144 247 aa17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 ERVFC1-1P60608 527 aa17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 RPL36AP83881 106 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 FER1L6-AS1Q8NA97 138 aa17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 RPL36ALQ969Q0 106 aaKnown RBP17.77■□□□□ 0.44
TSPAN4-217ENST00000527644 EREGO14944 169 aa17.76■□□□□ 0.43
TSPAN4-217ENST00000527644 IGHV3-30P01768 117 aa17.76■□□□□ 0.43
TSPAN4-217ENST00000527644 IGHV3-33P01772 117 aa17.76■□□□□ 0.43
TSPAN4-217ENST00000527644 IGHV3-30-3P0DP02 117 aa17.76■□□□□ 0.43
TSPAN4-217ENST00000527644 IGHV3-30-5P0DP03 117 aa17.76■□□□□ 0.43
TSPAN4-217ENST00000527644 SSTP61278 116 aa17.76■□□□□ 0.43
TSPAN4-217ENST00000527644 ZNF56Q15929 161 aa17.76■□□□□ 0.43
TSPAN4-217ENST00000527644 KRTAP10-2P60368 255 aa17.75■□□□□ 0.43
TSPAN4-217ENST00000527644 TPPP3Q9BW30 176 aa17.75■□□□□ 0.43
TSPAN4-217ENST00000527644 TRBV7-3A0A075B6L6 115 aa17.74■□□□□ 0.43
TSPAN4-217ENST00000527644 TMEM250H0YL14 139 aa17.74■□□□□ 0.43
TSPAN4-217ENST00000527644 SMIM17P0DL12 118 aa17.74■□□□□ 0.43
TSPAN4-217ENST00000527644 OR10G8Q8NGN5 311 aa17.74■□□□□ 0.43
TSPAN4-217ENST00000527644 AP1S3Q96PC3 154 aa17.74■□□□□ 0.43
TSPAN4-217ENST00000527644 LRP1BQ9NZR2 4599 aa17.74■□□□□ 0.43
TSPAN4-217ENST00000527644 UBE2D3P61077 147 aa17.73■□□□□ 0.43
TSPAN4-217ENST00000527644 UBE2D2P62837 147 aa17.73■□□□□ 0.43
TSPAN4-217ENST00000527644 CACNG7P62955 275 aa17.73■□□□□ 0.43
TSPAN4-217ENST00000527644 F2Z2F3 143 aa17.72■□□□□ 0.43
TSPAN4-217ENST00000527644 NUDT10Q8NFP7 164 aa17.72■□□□□ 0.43
TSPAN4-217ENST00000527644 OCC1Q8TAD7 63 aa17.72■□□□□ 0.43
TSPAN4-217ENST00000527644 NUDT11Q96G61 164 aa17.72■□□□□ 0.43
TSPAN4-217ENST00000527644 KIF25-AS1Q9Y6Z4 181 aa17.72■□□□□ 0.43
TSPAN4-217ENST00000527644 F5H697 171 aa17.71■□□□□ 0.43
TSPAN4-217ENST00000527644 A0A087WTM6 91 aa17.7■□□□□ 0.42
TSPAN4-217ENST00000527644 LAGE3Q14657 143 aa17.7■□□□□ 0.42
TSPAN4-217ENST00000527644 PGPEP1Q9NXJ5 209 aa17.7■□□□□ 0.42
TSPAN4-217ENST00000527644 K7EN84 100 aa17.69■□□□□ 0.42
TSPAN4-217ENST00000527644 NEXN-AS1Q8NBZ9 246 aa17.69■□□□□ 0.42
TSPAN4-217ENST00000527644 Q9HAA7 133 aa17.68■□□□□ 0.42
TSPAN4-217ENST00000527644 DNAH5Q8TE73 4624 aa17.68■□□□□ 0.42
TSPAN4-217ENST00000527644 PSCAO43653 123 aa17.67■□□□□ 0.42
TSPAN4-217ENST00000527644 NDUFS6O75380 124 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-217ENST00000527644 TOR2AQ5JU69 321 aa17.67■□□□□ 0.42
TSPAN4-217ENST00000527644 LYZL1Q6UWQ5 148 aa17.67■□□□□ 0.42
TSPAN4-217ENST00000527644 Q8N3U1 123 aa17.67■□□□□ 0.42
TSPAN4-217ENST00000527644 EIF5A2Q9GZV4 153 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-217ENST00000527644 RNASE7Q9H1E1 156 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-217ENST00000527644 RPP21Q9H633 154 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-217ENST00000527644 WDR73Q6P4I2 378 aa17.66■□□□□ 0.42
TSPAN4-217ENST00000527644 NIT1Q86X76 327 aa17.66■□□□□ 0.42
TSPAN4-217ENST00000527644 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.66■□□□□ 0.42
TSPAN4-217ENST00000527644 URGCP-MRPS24S4R325 110 aa17.66■□□□□ 0.42
TSPAN4-217ENST00000527644 RYR1P21817 5038 aa17.66■□□□□ 0.42
TSPAN4-217ENST00000527644 CDK2AP2O75956 126 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms