RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 LSM10Q969L4 123 aaKnown RBP3.19□□□□□ -1.9
NXF1-205ENST00000527497 TIMM21Q9BVV7 248 aa3.19□□□□□ -1.9
NXF1-205ENST00000527497 DPY30Q9C005 99 aa3.19□□□□□ -1.9
NXF1-205ENST00000527497 ARHGAP32A7KAX9 2087 aa3.19□□□□□ -1.9
NXF1-205ENST00000527497 C4AP0C0L4 1744 aa3.19□□□□□ -1.9
NXF1-205ENST00000527497 C4BP0C0L5 1744 aa3.19□□□□□ -1.9
NXF1-205ENST00000527497 PRRC2AP48634 2157 aaKnown RBP3.18□□□□□ -1.9
NXF1-205ENST00000527497 A0A087WSZ3 146 aa3.18□□□□□ -1.9
NXF1-205ENST00000527497 IGLV3-19P01714 112 aa3.18□□□□□ -1.9
NXF1-205ENST00000527497 VSTM2AQ8TAG5 236 aa3.18□□□□□ -1.9
NXF1-205ENST00000527497 MAP2P11137 1827 aaKnown RBP3.18□□□□□ -1.9
NXF1-205ENST00000527497 CCDC88CQ9P219 2028 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 HELZP42694 1942 aaKnown RBP3.17□□□□□ -1.9
NXF1-205ENST00000527497 KIF20BQ96Q89 1820 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 ARFGEF1Q9Y6D6 1849 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 TIAM2Q8IVF5 1701 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 A0A0G2JQZ4 141 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 OOSP1A8MZH6 123 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 J3QLW9 94 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 LINC00032P0C843 101 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 RNASE2P10153 161 aaKnown RBP3.17□□□□□ -1.9
NXF1-205ENST00000527497 NPC2P61916 151 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 ARPINQ7Z6K5 226 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 AP4S1Q9Y587 144 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 CICQ96RK0 1608 aaPredicted RBP3.17□□□□□ -1.9
NXF1-205ENST00000527497 CPSF1Q10570 1443 aaKnown RBP3.17□□□□□ -1.9
NXF1-205ENST00000527497 MYLKQ15746 1914 aa3.17□□□□□ -1.9
NXF1-205ENST00000527497 IGKV3D-11A0A0A0MRZ8 115 aa3.16□□□□□ -1.9
NXF1-205ENST00000527497 FAM24AA6NFZ4 105 aa3.16□□□□□ -1.9
NXF1-205ENST00000527497 EDF1O60869 148 aaKnown RBP3.16□□□□□ -1.9
NXF1-205ENST00000527497 GYPBP06028 91 aa3.16□□□□□ -1.9
NXF1-205ENST00000527497 ELOBQ15370 118 aa3.16□□□□□ -1.9
NXF1-205ENST00000527497 DEFB113Q30KQ7 82 aa3.16□□□□□ -1.9
NXF1-205ENST00000527497 SPTSSAQ969W0 71 aa3.16□□□□□ -1.9
NXF1-205ENST00000527497 SMIM7Q9BQ49 75 aa3.16□□□□□ -1.9
NXF1-205ENST00000527497 CENPFP49454 3210 aa3.16□□□□□ -1.9
NXF1-205ENST00000527497 MKI67P46013 3256 aaKnown RBP3.16□□□□□ -1.9
NXF1-205ENST00000527497 COL5A3P25940 1745 aaPredicted RBP3.16□□□□□ -1.9
NXF1-205ENST00000527497 BRCA2P51587 3418 aa3.15□□□□□ -1.9
NXF1-205ENST00000527497 LOC107984156A0A0G2JMH3 177 aa3.15□□□□□ -1.91
NXF1-205ENST00000527497 TCRBV4S1A1TA0A5B7 111 aa3.15□□□□□ -1.91
NXF1-205ENST00000527497 IL5P05113 134 aa3.15□□□□□ -1.91
NXF1-205ENST00000527497 C12orf73Q69YU5 71 aa3.15□□□□□ -1.91
NXF1-205ENST00000527497 ARL17AQ8IVW1 177 aa3.15□□□□□ -1.91
NXF1-205ENST00000527497 VAMP8Q9BV40 100 aa3.15□□□□□ -1.91
NXF1-205ENST00000527497 TMEM242Q9NWH2 141 aa3.15□□□□□ -1.91
NXF1-205ENST00000527497 DLEC1Q9Y238 1755 aa3.15□□□□□ -1.91
NXF1-205ENST00000527497 KIAA2026Q5HYC2 2103 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 AFDNP55196 1824 aaKnown RBP3.14□□□□□ -1.91
NXF1-205ENST00000527497 CEP290O15078 2479 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 SZT2Q5T011 3432 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 SDHAF1A6NFY7 115 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 NDUFB6O95139 128 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 TPRXLQ17RH7 258 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 FP248Q71RG6 208 aaPredicted RBP3.14□□□□□ -1.91
NXF1-205ENST00000527497 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 LCN9Q8WX39 176 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 RBBP6Q7Z6E9 1792 aaKnown RBP3.14□□□□□ -1.91
NXF1-205ENST00000527497 CD163L1Q9NR16 1453 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 HTTP42858 3142 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 SHANK1Q9Y566 2161 aa3.14□□□□□ -1.91
NXF1-205ENST00000527497 TNRC6CQ9HCJ0 1690 aaKnown RBP3.14□□□□□ -1.91
NXF1-205ENST00000527497 TRAV10A0A0B4J240 114 aa3.13□□□□□ -1.91
NXF1-205ENST00000527497 ERC2-IT1O76042 136 aa3.13□□□□□ -1.91
NXF1-205ENST00000527497 SNCGO76070 127 aa3.13□□□□□ -1.91
NXF1-205ENST00000527497 PIPP12273 146 aaPredicted RBP3.13□□□□□ -1.91
NXF1-205ENST00000527497 PYY3Q5JQD4 70 aa3.13□□□□□ -1.91
NXF1-205ENST00000527497 C2orf82Q6UX34 121 aa3.13□□□□□ -1.91
NXF1-205ENST00000527497 LINC00269Q8N2A0 174 aa3.13□□□□□ -1.91
NXF1-205ENST00000527497 ADAMTS7Q9UKP4 1686 aa3.13□□□□□ -1.91
NXF1-205ENST00000527497 TJP1Q07157 1748 aa3.13□□□□□ -1.91
NXF1-205ENST00000527497 C2orf70A6NJV1 201 aa3.12□□□□□ -1.91
NXF1-205ENST00000527497 C5orf67F2Z3F1 127 aa3.12□□□□□ -1.91
NXF1-205ENST00000527497 PDE6HQ13956 83 aa3.12□□□□□ -1.91
NXF1-205ENST00000527497 FAM19A2Q8N3H0 131 aa3.12□□□□□ -1.91
NXF1-205ENST00000527497 C10orf105Q8TEF2 133 aa3.12□□□□□ -1.91
NXF1-205ENST00000527497 TSKUQ8WUA8 353 aa3.12□□□□□ -1.91
NXF1-205ENST00000527497 PRO1933Q9H354 126 aa3.12□□□□□ -1.91
NXF1-205ENST00000527497 TMEM106BQ9NUM4 274 aa3.12□□□□□ -1.91
NXF1-205ENST00000527497 UNC79Q9P2D8 2635 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 SHROOM3Q8TF72 1996 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 RANBP2P49792 3224 aaKnown RBP3.11□□□□□ -1.91
NXF1-205ENST00000527497 P0C880 135 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 Q1T7F1 81 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 CASC2Q6XLA1 102 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 SLC25A26Q70HW3 274 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 NOTCH3Q9UM47 2321 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 ZSWIM8A7E2V4 1837 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 PKD1L2Q7Z442 2459 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 MCM3APO60318 1980 aa3.11□□□□□ -1.91
NXF1-205ENST00000527497 TRAV14DV4A0A0A6YYC5 116 aa3.1□□□□□ -1.91
NXF1-205ENST00000527497 PIGBOS1A0A0B4J2F0 54 aa3.1□□□□□ -1.91
NXF1-205ENST00000527497 TRGV4A0A0C4DH28 118 aa3.1□□□□□ -1.91
NXF1-205ENST00000527497 H3BQF6 201 aa3.1□□□□□ -1.91
NXF1-205ENST00000527497 PIRTP0C851 137 aa3.1□□□□□ -1.91
NXF1-205ENST00000527497 IGLC1P0CG04 106 aa3.1□□□□□ -1.91
NXF1-205ENST00000527497 DCDP81605 110 aaKnown RBP3.1□□□□□ -1.91
NXF1-205ENST00000527497 HCP5Q6MZN7 132 aa3.1□□□□□ -1.91
NXF1-205ENST00000527497 SMIM5Q71RC9 77 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms