RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 TRPT1Q86TN4 253 aaKnown RBP4.48□□□□□ -1.69
ATPAF1-208ENST00000526821 ZFP82Q8N141 532 aa4.48□□□□□ -1.69
ATPAF1-208ENST00000526821 SCRT2Q9NQ03 307 aa4.48□□□□□ -1.69
ATPAF1-208ENST00000526821 AGRNO00468 2067 aa4.48□□□□□ -1.69
ATPAF1-208ENST00000526821 TRAV12-2A0A075B6T6 113 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 TRAV12-3A0A0B4J271 114 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 IGKV3-20P01619 116 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 PRSS2P07478 247 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 RBMY1A1P0DJD3 496 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 RBMY1CP0DJD4 496 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 SNRPEP62304 92 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 SLAQ13239 276 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 RIGQ13278 110 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 RBMY1FQ15415 496 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 COA6Q5JTJ3 125 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 TMEM158Q8WZ71 300 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 KCNS1Q96KK3 526 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 LINC00467Q9BRT7 94 aa4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 MCRIP2Q9BUT9 160 aaKnown RBP4.47□□□□□ -1.69
ATPAF1-208ENST00000526821 IGHV1OR15-1A0A075B7D0 117 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 GNRH2O43555 120 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 NXPH4O95158 308 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 APCSP02743 223 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 AMBPP02760 352 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 GIG44P09565 113 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 RNASE3P12724 160 aaKnown RBP4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 NTF3P20783 257 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 ASIPP42127 132 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 CAMPP49913 170 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 MUC21Q5SSG8 566 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 OR10AG1Q8NH19 301 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 BORCS7Q96B45 105 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 C20orf144Q9BQM9 153 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 TPPP3Q9BW30 176 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 TP53TG3Q9ULZ0 132 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.7
ATPAF1-208ENST00000526821 LOC102724200A0A096LPH7 203 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 IGHV3-16A0A0C4DH30 117 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 MUC21A0A0G2JKD1 596 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 MUC21A0A140T8X8 626 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 H3BVH4 76 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 FXYD7P58549 80 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 CACNG7P62955 275 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 DEFA6Q01524 100 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 Q0VG73 95 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 FAM104BQ5XKR9 115 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 FAM159AQ6UWV7 190 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 STHQ8IWL8 128 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 C3orf56Q8N813 242 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 C9orf85Q96MD7 179 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 C2orf88Q9BSF0 95 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 ALKBH7Q9BT30 221 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 TMEM191AQ9H0A3 160 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 WFDC10AQ9H1F0 79 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 NAGKQ9UJ70 344 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 U3KQK5 164 aa4.45□□□□□ -1.7
ATPAF1-208ENST00000526821 INSP01308 110 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 IGLL1P15814 213 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 NDUFA6P56556 154 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 NUTF2P61970 127 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 KIAA1644Q3SXP7 199 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 OR10J3Q5JRS4 329 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 MORN3Q6PF18 240 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 C12orf54Q6X4T0 127 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 C1orf158Q8N1D5 194 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 PRR26Q8N8Z3 221 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 CSNK1G2-AS1Q8NCQ2 148 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 RNF185Q96GF1 192 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 C14orf144Q96I85 54 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 MDFICQ9P1T7 246 aa4.44□□□□□ -1.7
ATPAF1-208ENST00000526821 PKD1L1Q8TDX9 2849 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 IFITM10A6NMD0 228 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 ESDP10768 282 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 RAB4AP20338 218 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 S100A4P26447 101 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 SRIP30626 198 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 MRPL51Q4U2R6 128 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 SPANXN1Q5VSR9 72 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 GTSCR1Q86UQ5 136 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 AMN1Q8IY45 258 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 HIST3H2BBQ8N257 126 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 TMEM256Q8N2U0 113 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 DEFB125Q8N687 156 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 POM121L12Q8N7R1 296 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 C11orf72Q8NBR9 251 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 C18orf32Q8TCD1 76 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 PTH2Q96A98 100 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 URB1-AS1Q96HZ7 61 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 XCL2Q9UBD3 114 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 KIF25-AS1Q9Y6Z4 181 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 MUC4Q99102 2169 aa4.43□□□□□ -1.7
ATPAF1-208ENST00000526821 NUPR1O60356 82 aa4.42□□□□□ -1.7
ATPAF1-208ENST00000526821 TNFRSF6BO95407 300 aa4.42□□□□□ -1.7
ATPAF1-208ENST00000526821 EVI2AP22794 236 aa4.42□□□□□ -1.7
ATPAF1-208ENST00000526821 LINC00315P59091 139 aa4.42□□□□□ -1.7
ATPAF1-208ENST00000526821 PKIAP61925 76 aa4.42□□□□□ -1.7
ATPAF1-208ENST00000526821 EGFEM1PQ0D2K5 195 aa4.42□□□□□ -1.7
ATPAF1-208ENST00000526821 LINC01587Q99440 93 aa4.42□□□□□ -1.7
ATPAF1-208ENST00000526821 C1QTNF4Q9BXJ3 329 aa4.42□□□□□ -1.7
ATPAF1-208ENST00000526821 PHLDA3Q9Y5J5 127 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms