RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GTSF1Q8WW33 167 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 JPT2Q9H910 190 aa7.56□□□□□ -1.2
NEDD8-204ENST00000526430 RS1O15537 224 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 NXPH4O95158 308 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 OR5AL1P0C617 328 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 ASIPP42127 132 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 FOXA3P55318 350 aaPredicted RBP7.55□□□□□ -1.2
NEDD8-204ENST00000526430 XGP55808 180 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 FHL2Q14192 279 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 ZNF876PQ49A33 203 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 C10orf91Q5T1B1 145 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 UQCC3Q6UW78 93 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 SYT8Q8NBV8 401 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 OR10AG1Q8NH19 301 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 ZNF479Q96JC4 524 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 SAMD10Q9BYL1 202 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 BIN3Q9NQY0 253 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 OSTCQ9NRP0 149 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 NAT8Q9UHE5 227 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 V9GYV3 84 aa7.55□□□□□ -1.2
NEDD8-204ENST00000526430 P01737 135 aa7.54□□□□□ -1.2
NEDD8-204ENST00000526430 ATP5G1P05496 136 aa7.54□□□□□ -1.2
NEDD8-204ENST00000526430 BTF3P20290 206 aaKnown RBP7.54□□□□□ -1.2
NEDD8-204ENST00000526430 PIK3CD-AS1Q5SR53 167 aa7.54□□□□□ -1.2
NEDD8-204ENST00000526430 CFAP126Q5VTH2 177 aa7.54□□□□□ -1.2
NEDD8-204ENST00000526430 Q6ZSN1 163 aa7.54□□□□□ -1.2
NEDD8-204ENST00000526430 DAZAP1Q96EP5 407 aaKnown RBP7.54□□□□□ -1.2
NEDD8-204ENST00000526430 VSIG2Q96IQ7 327 aa7.54□□□□□ -1.2
NEDD8-204ENST00000526430 RPP21Q9H633 154 aaKnown RBP7.54□□□□□ -1.2
NEDD8-204ENST00000526430 MSRB1Q9NZV6 116 aa7.54□□□□□ -1.2
NEDD8-204ENST00000526430 MUC21A0A0G2JKD1 596 aa7.53□□□□□ -1.2
NEDD8-204ENST00000526430 MUC21A0A140T8X8 626 aa7.53□□□□□ -1.2
NEDD8-204ENST00000526430 GATCO43716 136 aaKnown RBP7.53□□□□□ -1.2
NEDD8-204ENST00000526430 CRYGDP07320 174 aa7.53□□□□□ -1.2
NEDD8-204ENST00000526430 LINC00315P59091 139 aa7.53□□□□□ -1.2
NEDD8-204ENST00000526430 KIF25-AS1Q9Y6Z4 181 aa7.53□□□□□ -1.2
NEDD8-204ENST00000526430 TRGV2A0A075B6R0 118 aa7.52□□□□□ -1.21
NEDD8-204ENST00000526430 IGHV3-53P01767 116 aa7.52□□□□□ -1.21
NEDD8-204ENST00000526430 HTN3P15516 51 aa7.52□□□□□ -1.21
NEDD8-204ENST00000526430 S100A4P26447 101 aaKnown RBP7.52□□□□□ -1.21
NEDD8-204ENST00000526430 ERVFC1-1P60608 527 aa7.52□□□□□ -1.21
NEDD8-204ENST00000526430 RPS20P60866 119 aaKnown RBP7.52□□□□□ -1.21
NEDD8-204ENST00000526430 LYZL1Q6UWQ5 148 aa7.52□□□□□ -1.21
NEDD8-204ENST00000526430 ZNRF2Q8NHG8 242 aa7.52□□□□□ -1.21
NEDD8-204ENST00000526430 SFRP2Q96HF1 295 aa7.52□□□□□ -1.21
NEDD8-204ENST00000526430 Q9UF83 564 aa7.52□□□□□ -1.21
NEDD8-204ENST00000526430 TRAV4A0A0B4J268 109 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 KRTAP29-1A8MX34 341 aaPredicted RBP7.51□□□□□ -1.21
NEDD8-204ENST00000526430 F5H768 121 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 CTRLP40313 264 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 ADIRFQ15847 76 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 CT83Q5H943 113 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 TMEM88Q6PEY1 159 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 SLC7A5P1Q8MH63 180 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 FER1L6-AS1Q8NA97 138 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 C15orf53Q8NAA6 179 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 OR10G8Q8NGN5 311 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 SEC11CQ9BY50 192 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 CNFNQ9BYD5 112 aa7.51□□□□□ -1.21
NEDD8-204ENST00000526430 M0R381 172 aa7.5□□□□□ -1.21
NEDD8-204ENST00000526430 GATA1P15976 413 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-204ENST00000526430 CRYBA4P53673 196 aa7.5□□□□□ -1.21
NEDD8-204ENST00000526430 WDR73Q6P4I2 378 aa7.5□□□□□ -1.21
NEDD8-204ENST00000526430 OR4C5Q8NGB2 326 aa7.5□□□□□ -1.21
NEDD8-204ENST00000526430 TSKUQ8WUA8 353 aa7.5□□□□□ -1.21
NEDD8-204ENST00000526430 PHLDA3Q9Y5J5 127 aa7.5□□□□□ -1.21
NEDD8-204ENST00000526430 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 SMIM27A0A1W2PRY6 76 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 A8MWL6 223 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 F2Z2F3 143 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 F8W036 122 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 NTF3P20783 257 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 SSTP61278 116 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 ZFP82Q8N141 532 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 GFRA4Q9GZZ7 299 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 HHLA3Q9XRX5 114 aa7.49□□□□□ -1.21
NEDD8-204ENST00000526430 CARHSP1Q9Y2V2 147 aaKnown RBP7.49□□□□□ -1.21
NEDD8-204ENST00000526430 A0A087WWL8 130 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 IGHV3-73A0A0B4J1V6 119 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 A0A0J9YY99 117 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 A0A1W2PPQ1 181 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 A8MWV9 139 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 ZFP2Q6ZN57 461 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 SLC25A29Q8N8R3 303 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 PGLYRP4Q96LB8 373 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
NEDD8-204ENST00000526430 A0A096LPF7 62 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 LOC100131303A0A0U1RQF7 123 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 XKRY2A2RUG3 117 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 HIGD1CA8MV81 97 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 H3BNG1 76 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 FAM229AH3BQW9 127 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 EVI2AP22794 236 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 CACNG7P62955 275 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 PNRC1Q12796 327 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-204ENST00000526430 CDPF1Q6NVV7 123 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 C14orf178Q8N769 122 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-204ENST00000526430 C15orf54Q8N8G6 183 aa7.47□□□□□ -1.21
NEDD8-204ENST00000526430 NUP35Q8NFH5 326 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms