RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 LINC00694P0DN24 101 aa12.49□□□□□ -0.41
TSPAN4-216ENST00000526055 BCL2P10415 239 aa12.49□□□□□ -0.41
TSPAN4-216ENST00000526055 RPL35P42766 123 aaKnown RBP12.49□□□□□ -0.41
TSPAN4-216ENST00000526055 MEF2BQ02080 365 aaPredicted RBP12.49□□□□□ -0.41
TSPAN4-216ENST00000526055 Q6ZSN1 163 aa12.49□□□□□ -0.41
TSPAN4-216ENST00000526055 SAMD10Q9BYL1 202 aa12.49□□□□□ -0.41
TSPAN4-216ENST00000526055 JPT2Q9H910 190 aa12.49□□□□□ -0.41
TSPAN4-216ENST00000526055 TMSB15BA0A087X1C1 80 aa12.48□□□□□ -0.41
TSPAN4-216ENST00000526055 PDE6DO43924 150 aa12.48□□□□□ -0.41
TSPAN4-216ENST00000526055 ERVFC1-1P60608 527 aa12.48□□□□□ -0.41
TSPAN4-216ENST00000526055 OR10J3Q5JRS4 329 aa12.48□□□□□ -0.41
TSPAN4-216ENST00000526055 LYPD6BQ8NI32 183 aa12.48□□□□□ -0.41
TSPAN4-216ENST00000526055 SMIM12Q96EX1 92 aa12.48□□□□□ -0.41
TSPAN4-216ENST00000526055 VAX2Q9UIW0 290 aa12.48□□□□□ -0.41
TSPAN4-216ENST00000526055 M0R381 172 aa12.47□□□□□ -0.41
TSPAN4-216ENST00000526055 A0A087WWC5 75 aa12.46□□□□□ -0.41
TSPAN4-216ENST00000526055 CDK2AP2O75956 126 aa12.46□□□□□ -0.41
TSPAN4-216ENST00000526055 SSBP4Q9BWG4 385 aaPredicted RBP12.46□□□□□ -0.41
TSPAN4-216ENST00000526055 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.41
TSPAN4-216ENST00000526055 TRBV10-1A0A0K0K1A3 114 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 GAGE12JA6NER3 117 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 SNAI2O43623 268 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 OR5AL1P0C617 328 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 GAGE1Q13065 139 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 GAGE4Q13068 117 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 GAGE5Q13069 117 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 GAGE13Q4V321 117 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 C14orf178Q8N769 122 aaPredicted RBP12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
TSPAN4-216ENST00000526055 IBA57-AS1B1ANH7 110 aa12.44□□□□□ -0.42
TSPAN4-216ENST00000526055 KRTAP10-2P60368 255 aa12.44□□□□□ -0.42
TSPAN4-216ENST00000526055 RPL19P84098 196 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-216ENST00000526055 PRR27Q6MZM9 219 aa12.44□□□□□ -0.42
TSPAN4-216ENST00000526055 CDPF1Q6NVV7 123 aa12.44□□□□□ -0.42
TSPAN4-216ENST00000526055 A0A087WWL8 130 aa12.43□□□□□ -0.42
TSPAN4-216ENST00000526055 RBFOX3A6NFN3 312 aa12.43□□□□□ -0.42
TSPAN4-216ENST00000526055 LAGE3Q14657 143 aa12.43□□□□□ -0.42
TSPAN4-216ENST00000526055 CENPWQ5EE01 88 aa12.43□□□□□ -0.42
TSPAN4-216ENST00000526055 DERL1Q9BUN8 251 aa12.43□□□□□ -0.42
TSPAN4-216ENST00000526055 OR10AG1Q8NH19 301 aa12.42□□□□□ -0.42
TSPAN4-216ENST00000526055 BIN3Q9NQY0 253 aa12.42□□□□□ -0.42
TSPAN4-216ENST00000526055 MED9Q9NWA0 146 aa12.42□□□□□ -0.42
TSPAN4-216ENST00000526055 A0A087WTM6 91 aa12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 NDUFS6O75380 124 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 GNG4P50150 75 aa12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 RPS20P60866 119 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 RAB4BP61018 213 aa12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 SPANXN1Q5VSR9 72 aa12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 DAZAP1Q96EP5 407 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 LRP1BQ9NZR2 4599 aa12.41□□□□□ -0.42
TSPAN4-216ENST00000526055 RYR1P21817 5038 aa12.4□□□□□ -0.42
TSPAN4-216ENST00000526055 TMEM250H0YL14 139 aa12.4□□□□□ -0.42
TSPAN4-216ENST00000526055 IGLV2-8P01709 118 aa12.4□□□□□ -0.42
TSPAN4-216ENST00000526055 FAM210AQ96ND0 272 aa12.4□□□□□ -0.42
TSPAN4-216ENST00000526055 EIF5A2Q9GZV4 153 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-216ENST00000526055 Q9UF83 564 aa12.4□□□□□ -0.42
TSPAN4-216ENST00000526055 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
TSPAN4-216ENST00000526055 TOR2AQ5JU69 321 aa12.39□□□□□ -0.43
TSPAN4-216ENST00000526055 OR10G8Q8NGN5 311 aa12.39□□□□□ -0.43
TSPAN4-216ENST00000526055 TRBV7-3A0A075B6L6 115 aa12.38□□□□□ -0.43
TSPAN4-216ENST00000526055 XKRY2A2RUG3 117 aa12.38□□□□□ -0.43
TSPAN4-216ENST00000526055 PSCAO43653 123 aa12.38□□□□□ -0.43
TSPAN4-216ENST00000526055 IGHV3-30P01768 117 aa12.38□□□□□ -0.43
TSPAN4-216ENST00000526055 IGHV3-33P01772 117 aa12.38□□□□□ -0.43
TSPAN4-216ENST00000526055 IGHV3-30-3P0DP02 117 aa12.38□□□□□ -0.43
TSPAN4-216ENST00000526055 IGHV3-30-5P0DP03 117 aa12.38□□□□□ -0.43
TSPAN4-216ENST00000526055 RAB14P61106 215 aa12.38□□□□□ -0.43
TSPAN4-216ENST00000526055 RAB19A4D1S5 217 aa12.37□□□□□ -0.43
TSPAN4-216ENST00000526055 UBE2D3P61077 147 aa12.37□□□□□ -0.43
TSPAN4-216ENST00000526055 UBE2D2P62837 147 aa12.37□□□□□ -0.43
TSPAN4-216ENST00000526055 OR2D3Q8NGH3 330 aa12.37□□□□□ -0.43
TSPAN4-216ENST00000526055 AP1S3Q96PC3 154 aa12.37□□□□□ -0.43
TSPAN4-216ENST00000526055 CHCHD7Q9BUK0 85 aa12.37□□□□□ -0.43
TSPAN4-216ENST00000526055 TM2D2Q9BX73 214 aa12.37□□□□□ -0.43
TSPAN4-216ENST00000526055 TRAV8-3A0A0A6YYJ7 113 aa12.36□□□□□ -0.43
TSPAN4-216ENST00000526055 P01737 135 aa12.36□□□□□ -0.43
TSPAN4-216ENST00000526055 IGLC6P0CF74 106 aa12.36□□□□□ -0.43
TSPAN4-216ENST00000526055 ZNF56Q15929 161 aa12.36□□□□□ -0.43
TSPAN4-216ENST00000526055 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.36□□□□□ -0.43
TSPAN4-216ENST00000526055 FER1L6-AS1Q8NA97 138 aa12.36□□□□□ -0.43
TSPAN4-216ENST00000526055 HSPG2P98160 4391 aa12.35□□□□□ -0.43
TSPAN4-216ENST00000526055 TRBV20OR9-2A0A075B6H5 130 aa12.35□□□□□ -0.43
TSPAN4-216ENST00000526055 F2Z2F3 143 aa12.35□□□□□ -0.43
TSPAN4-216ENST00000526055 SMIM17P0DL12 118 aa12.35□□□□□ -0.43
TSPAN4-216ENST00000526055 CACNG7P62955 275 aa12.35□□□□□ -0.43
TSPAN4-216ENST00000526055 Q9HAA7 133 aa12.35□□□□□ -0.43
TSPAN4-216ENST00000526055 URGCP-MRPS24S4R325 110 aa12.35□□□□□ -0.43
TSPAN4-216ENST00000526055 NIT1Q86X76 327 aa12.34□□□□□ -0.43
TSPAN4-216ENST00000526055 SMDT1Q9H4I9 107 aa12.34□□□□□ -0.43
TSPAN4-216ENST00000526055 MUC21A0A0G2JKD1 596 aa12.33□□□□□ -0.44
TSPAN4-216ENST00000526055 MUC21A0A140T8X8 626 aa12.33□□□□□ -0.44
TSPAN4-216ENST00000526055 LRCOL1A6NCL2 159 aa12.33□□□□□ -0.44
TSPAN4-216ENST00000526055 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
TSPAN4-216ENST00000526055 NTN5Q8WTR8 489 aaPredicted RBP12.33□□□□□ -0.44
TSPAN4-216ENST00000526055 COX11Q9Y6N1 276 aa12.33□□□□□ -0.44
TSPAN4-216ENST00000526055 KIF25-AS1Q9Y6Z4 181 aa12.33□□□□□ -0.44
TSPAN4-216ENST00000526055 F5H697 171 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms