RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ARMS2P0C7Q2 107 aa15.6■□□□□ 0.09
USP47-205ENST00000525257 Q86TA4 180 aa15.6■□□□□ 0.09
USP47-205ENST00000525257 OR11H4Q8NGC9 324 aa15.6■□□□□ 0.09
USP47-205ENST00000525257 A0A1W2PRE2 83 aa15.59■□□□□ 0.09
USP47-205ENST00000525257 GRIFINA4D1Z8 144 aa15.59■□□□□ 0.09
USP47-205ENST00000525257 IGLV2-8P01709 118 aa15.59■□□□□ 0.09
USP47-205ENST00000525257 SERF2P84101 59 aa15.59■□□□□ 0.09
USP47-205ENST00000525257 ELOBQ15370 118 aa15.59■□□□□ 0.09
USP47-205ENST00000525257 KCNIP4Q6PIL6 250 aa15.59■□□□□ 0.09
USP47-205ENST00000525257 KRBOX1C9JBD0 128 aa15.58■□□□□ 0.08
USP47-205ENST00000525257 ATRAIDQ6UW56 229 aa15.58■□□□□ 0.08
USP47-205ENST00000525257 CHCHD7Q9BUK0 85 aa15.58■□□□□ 0.08
USP47-205ENST00000525257 PEX7O00628 323 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 CRIP1P50238 77 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 DEFA1P59665 94 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 DEFA3P59666 94 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 UBE2G2P60604 165 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 DNLZQ5SXM8 178 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 ZC2HC1AQ96GY0 325 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 SFRP2Q96HF1 295 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 TNFSF18Q9UNG2 199 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 PLA2G2DQ9UNK4 145 aa15.57■□□□□ 0.08
USP47-205ENST00000525257 M0R381 172 aa15.56■□□□□ 0.08
USP47-205ENST00000525257 AQP10Q96PS8 301 aa15.56■□□□□ 0.08
USP47-205ENST00000525257 PHLDA3Q9Y5J5 127 aa15.56■□□□□ 0.08
USP47-205ENST00000525257 SH2D1AO60880 128 aa15.55■□□□□ 0.08
USP47-205ENST00000525257 Q0VG73 95 aa15.55■□□□□ 0.08
USP47-205ENST00000525257 C14orf177Q52M58 125 aa15.55■□□□□ 0.08
USP47-205ENST00000525257 C1orf43Q9BWL3 253 aa15.55■□□□□ 0.08
USP47-205ENST00000525257 TMSB15BA0A087X1C1 80 aa15.54■□□□□ 0.08
USP47-205ENST00000525257 TPT1P13693 172 aaKnown RBP15.54■□□□□ 0.08
USP47-205ENST00000525257 RPL37AP61513 92 aaKnown RBP15.54■□□□□ 0.08
USP47-205ENST00000525257 RPL36AP83881 106 aaKnown RBP15.54■□□□□ 0.08
USP47-205ENST00000525257 ZNF726P1Q15940 193 aa15.54■□□□□ 0.08
USP47-205ENST00000525257 RPL36ALQ969Q0 106 aaKnown RBP15.54■□□□□ 0.08
USP47-205ENST00000525257 TMEM262E9PQX1 116 aa15.53■□□□□ 0.08
USP47-205ENST00000525257 UBE2D3P61077 147 aa15.53■□□□□ 0.08
USP47-205ENST00000525257 UBE2D2P62837 147 aa15.53■□□□□ 0.08
USP47-205ENST00000525257 TRBV10-1A0A0K0K1A3 114 aa15.52■□□□□ 0.08
USP47-205ENST00000525257 CRPP02741 224 aa15.52■□□□□ 0.08
USP47-205ENST00000525257 ENHOQ6UWT2 76 aa15.52■□□□□ 0.08
USP47-205ENST00000525257 ALG5Q9Y673 324 aa15.52■□□□□ 0.08
USP47-205ENST00000525257 TRBV7-3A0A075B6L6 115 aa15.51■□□□□ 0.07
USP47-205ENST00000525257 FAM162BQ5T6X4 162 aa15.51■□□□□ 0.07
USP47-205ENST00000525257 C15orf54Q8N8G6 183 aa15.51■□□□□ 0.07
USP47-205ENST00000525257 HIST1H2BAQ96A08 127 aa15.51■□□□□ 0.07
USP47-205ENST00000525257 CTXND1A0A1B0GTU2 59 aa15.5■□□□□ 0.07
USP47-205ENST00000525257 FAM74A7A6NL05 159 aa15.5■□□□□ 0.07
USP47-205ENST00000525257 HNRNPA3P51991 378 aaKnown RBP15.5■□□□□ 0.07
USP47-205ENST00000525257 ZFP82Q8N141 532 aa15.5■□□□□ 0.07
USP47-205ENST00000525257 TRBV6-8A0A0A6YYG3 113 aa15.49■□□□□ 0.07
USP47-205ENST00000525257 HLA-DQA1P01909 254 aa15.49■□□□□ 0.07
USP47-205ENST00000525257 MPV17L2Q567V2 206 aa15.49■□□□□ 0.07
USP47-205ENST00000525257 RPL7L1Q6DKI1 246 aaKnown RBP15.49■□□□□ 0.07
USP47-205ENST00000525257 COX8CQ7Z4L0 72 aa15.49■□□□□ 0.07
USP47-205ENST00000525257 ZFP30Q9Y2G7 519 aa15.49■□□□□ 0.07
USP47-205ENST00000525257 USP17L23D6RBM5 183 aa15.48■□□□□ 0.07
USP47-205ENST00000525257 LINC01559Q495D7 138 aa15.48■□□□□ 0.07
USP47-205ENST00000525257 ANGP03950 147 aaKnown RBP15.47■□□□□ 0.07
USP47-205ENST00000525257 UBE2G1P62253 170 aa15.47■□□□□ 0.07
USP47-205ENST00000525257 ZNF674Q2M3X9 581 aa15.47■□□□□ 0.07
USP47-205ENST00000525257 OR10G8Q8NGN5 311 aa15.47■□□□□ 0.07
USP47-205ENST00000525257 DAZAP1Q96EP5 407 aaKnown RBP15.47■□□□□ 0.07
USP47-205ENST00000525257 FMC1Q96HJ9 113 aa15.47■□□□□ 0.07
USP47-205ENST00000525257 NKX6-2Q9C056 277 aaPredicted RBP15.47■□□□□ 0.07
USP47-205ENST00000525257 Q5BKY6 102 aa15.46■□□□□ 0.07
USP47-205ENST00000525257 PRSS1P07477 247 aa15.45■□□□□ 0.06
USP47-205ENST00000525257 ZNF56Q15929 161 aa15.45■□□□□ 0.06
USP47-205ENST00000525257 BORCS7-ASMTA0A0B4J1R7 106 aa15.44■□□□□ 0.06
USP47-205ENST00000525257 PTTG1O95997 202 aa15.44■□□□□ 0.06
USP47-205ENST00000525257 NEXN-AS1Q8NBZ9 246 aa15.44■□□□□ 0.06
USP47-205ENST00000525257 CHCHD5Q9BSY4 110 aa15.44■□□□□ 0.06
USP47-205ENST00000525257 RAB4BP61018 213 aa15.43■□□□□ 0.06
USP47-205ENST00000525257 INO80EQ8NBZ0 244 aaPredicted RBP15.43■□□□□ 0.06
USP47-205ENST00000525257 MED28Q9H204 178 aa15.43■□□□□ 0.06
USP47-205ENST00000525257 LTAP01374 205 aa15.42■□□□□ 0.06
USP47-205ENST00000525257 AKR1C8PQ5T2L2 129 aa15.42■□□□□ 0.06
USP47-205ENST00000525257 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.42■□□□□ 0.06
USP47-205ENST00000525257 MIAQ16674 131 aa15.41■□□□□ 0.06
USP47-205ENST00000525257 CLPSL2Q6UWE3 100 aa15.41■□□□□ 0.06
USP47-205ENST00000525257 OR10AG1Q8NH19 301 aa15.41■□□□□ 0.06
USP47-205ENST00000525257 TRBV6-1A0A0K0K1D8 114 aa15.4■□□□□ 0.06
USP47-205ENST00000525257 MAP1LC3B2A6NCE7 125 aa15.4■□□□□ 0.06
USP47-205ENST00000525257 DGAT2L7PQ6IED9 249 aa15.4■□□□□ 0.06
USP47-205ENST00000525257 PRR27Q6MZM9 219 aa15.4■□□□□ 0.06
USP47-205ENST00000525257 C9orf163Q8N9P6 203 aa15.4■□□□□ 0.06
USP47-205ENST00000525257 MAP1LC3BQ9GZQ8 125 aa15.4■□□□□ 0.06
USP47-205ENST00000525257 FXYD6-FXYD2A0A087WZ82 144 aa15.39■□□□□ 0.05
USP47-205ENST00000525257 A6NHS1 94 aa15.39■□□□□ 0.05
USP47-205ENST00000525257 PANO1I0J062 215 aa15.39■□□□□ 0.05
USP47-205ENST00000525257 AKR1C3P42330 323 aa15.39■□□□□ 0.05
USP47-205ENST00000525257 PKIAP61925 76 aa15.39■□□□□ 0.05
USP47-205ENST00000525257 RPL19P84098 196 aaKnown RBP15.39■□□□□ 0.05
USP47-205ENST00000525257 CST9LP1Q5W188 147 aa15.39■□□□□ 0.05
USP47-205ENST00000525257 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.39■□□□□ 0.05
USP47-205ENST00000525257 GIPP09681 153 aaPredicted RBP15.37■□□□□ 0.05
USP47-205ENST00000525257 NTM-AS1Q6ZSK4 140 aa15.37■□□□□ 0.05
USP47-205ENST00000525257 ZNF471Q9BX82 626 aaPredicted RBP15.37■□□□□ 0.05
USP47-205ENST00000525257 MUC21A0A0G2JKD1 596 aa15.36■□□□□ 0.05
USP47-205ENST00000525257 MUC21A0A140T8X8 626 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms