RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 Q9H8V8 135 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 GNG13Q9P2W3 67 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 XCL2Q9UBD3 114 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 EPDR1Q9UM22 224 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 PSG8Q9UQ74 426 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 RNF24Q9Y225 148 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 ARL2-SNX15V9GYD0 113 aa2.05□□□□□ -2.08
CSDE1-208ENST00000524652 RNF213Q63HN8 5207 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 LRP1BQ9NZR2 4599 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 IGHV3OR16-12A0A075B7B8 117 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 TRAV12-3A0A0B4J271 114 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 IGHV3-38A0A0C4DH36 116 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 KIR2DL5BA0A0G2JN68 375 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 KIR2DL5BA0A0G2JPC4 375 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 C7orf71A4D174 169 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 RBAKDNA6NC62 111 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 RBFOX3A6NFN3 312 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF705GA8MUZ8 300 aaPredicted RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 K7EN84 100 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 DEFB4AO15263 64 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 DUSP14O95147 198 aaKnown RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 LTAP01374 205 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 IFNA7P01567 189 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 HBE1P02100 147 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 SRP19P09132 144 aaKnown RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 ADCYAP1P18509 176 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 RPL35P42766 123 aaKnown RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 CDKN1BP46527 198 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF138P52744 262 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 CMC4P56277 68 aaPredicted RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 FLI1Q01543 452 aaPredicted RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 MEF2BQ02080 365 aaPredicted RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF506Q5JVG8 444 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 CLLU1Q5K131 121 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 MUC21Q5SSG8 566 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 TMEM78Q5T7P6 136 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 SAMD13Q5VXD3 122 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 CST9LP1Q5W188 147 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 Q6AWC8 147 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 EBLN2Q6P2I7 272 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 MORN3Q6PF18 240 aaPredicted RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 Q6ZVH6 145 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 COX8CQ7Z4L0 72 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 PRNTQ86SH4 94 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 KIR2DL5AQ8N109 375 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 ARL6IP6Q8N6S5 226 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 OR10J6PQ8NGY7 276 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 KIR2DL5BQ8NHK3 375 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 C11orf52Q96A22 123 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 RCHY1Q96PM5 261 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 ODF3Q96PU9 254 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 JPT2Q9H910 190 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 EDA2RQ9HAV5 297 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 MANBALQ9NQG1 85 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 ZMAT5Q9UDW3 170 aaKnown RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 PRELID1Q9Y255 219 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 KLF12Q9Y4X4 402 aa2.04□□□□□ -2.08
CSDE1-208ENST00000524652 APOBP04114 4563 aaKnown RBP2.04□□□□□ -2.08
CSDE1-208ENST00000524652 TRBV6-1A0A0K0K1D8 114 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 A0A1W2PPQ1 181 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 UBE2CO00762 179 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 GNRH2O43555 120 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 GCGP01275 180 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 INSP01308 110 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 TYMSP04818 313 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 GPX1P07203 203 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 RNASE4P34096 147 aaKnown RBP2.03□□□□□ -2.08
CSDE1-208ENST00000524652 LEPP41159 167 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 AKR1C3P42330 323 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 CSN1S1P47710 185 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 PPT1P50897 306 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 APOC4P55056 127 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 RPL19P84098 196 aaKnown RBP2.03□□□□□ -2.08
CSDE1-208ENST00000524652 OR5I1Q13606 314 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 TMEM183BQ1AE95 376 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF674Q2M3X9 581 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 CENPWQ5EE01 88 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 ZNF767PQ75MW2 155 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 C11orf72Q8NBR9 251 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 OR11H2Q8NH07 326 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 OCC1Q8TAD7 63 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 CMTM2Q8TAZ6 248 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 RNASE8Q8TDE3 154 aaKnown RBP2.03□□□□□ -2.08
CSDE1-208ENST00000524652 HIST1H2BAQ96A08 127 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 FMC1Q96HJ9 113 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 LINC00477Q96M19 166 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 LINC00167Q96N53 147 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 NKX6-2Q9C056 277 aaPredicted RBP2.03□□□□□ -2.08
CSDE1-208ENST00000524652 EIF5A2Q9GZV4 153 aaKnown RBP2.03□□□□□ -2.08
CSDE1-208ENST00000524652 TREM1Q9NP99 234 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 MED9Q9NWA0 146 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 VAX2Q9UIW0 290 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 TP53TG1Q9Y2A0 90 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 LENEPQ9Y5L5 61 aa2.03□□□□□ -2.08
CSDE1-208ENST00000524652 IGHV1OR15-1A0A075B7D0 117 aa2.02□□□□□ -2.09
CSDE1-208ENST00000524652 TRBV7-9A0A0J9YWB2 115 aa2.02□□□□□ -2.09
CSDE1-208ENST00000524652 SERTM2A0A1B0GWG4 89 aa2.02□□□□□ -2.09
CSDE1-208ENST00000524652 LINC00862A6NCI5 91 aa2.02□□□□□ -2.09
CSDE1-208ENST00000524652 C19orf71A6NCJ1 209 aa2.02□□□□□ -2.09
CSDE1-208ENST00000524652 KRBOX1C9JBD0 128 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms