RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 NUDT15Q9NV35 164 aa7.36□□□□□ -1.23
SDCBP-211ENST00000523441 IGKV3D-20A0A0C4DH25 116 aa7.35□□□□□ -1.23
SDCBP-211ENST00000523441 PTTG1O95997 202 aa7.35□□□□□ -1.23
SDCBP-211ENST00000523441 RAB2AP61019 212 aa7.35□□□□□ -1.23
SDCBP-211ENST00000523441 FLI1Q01543 452 aaPredicted RBP7.35□□□□□ -1.23
SDCBP-211ENST00000523441 IL15RAQ13261 267 aa7.35□□□□□ -1.23
SDCBP-211ENST00000523441 SCGB1C1Q8TD33 95 aa7.35□□□□□ -1.23
SDCBP-211ENST00000523441 PTH2Q96A98 100 aa7.35□□□□□ -1.23
SDCBP-211ENST00000523441 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 TMSB15BA0A087X1C1 80 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 TRBV6-8A0A0A6YYG3 113 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 TRAV34A0A0B4J273 112 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 B4DEV8 164 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 K7EQM0 130 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 RHODO00212 210 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 TCRBP04435 133 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 TCRAP04437 139 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 IL7P13232 177 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 GAGE6Q13070 117 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 MIAQ16674 131 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 WDR73Q6P4I2 378 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 LINC00269Q8N2A0 174 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 OR11H4Q8NGC9 324 aa7.34□□□□□ -1.23
SDCBP-211ENST00000523441 SDHCQ99643 169 aaPredicted RBP7.34□□□□□ -1.23
SDCBP-211ENST00000523441 IGKV2-24A0A0C4DH68 120 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 A0A0J9YXV3 536 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 LYRM1O43325 122 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 H2AFB2P0C5Z0 115 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 ARMS2P0C7Q2 107 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 ARL14EPLP0DKL9 152 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 DEFA3P59666 94 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 UBE2D3P61077 147 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 UBE2D2P62837 147 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 MAJINQ3KP22 176 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 AP5S1Q9NUS5 200 aa7.33□□□□□ -1.24
SDCBP-211ENST00000523441 TRBV7-3A0A075B6L6 115 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 MUC21A0A0G2JKD1 596 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 H0YIZ8 118 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 PLA2G10O15496 165 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
SDCBP-211ENST00000523441 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
SDCBP-211ENST00000523441 PRR3P79522 188 aaKnown RBP7.32□□□□□ -1.24
SDCBP-211ENST00000523441 ZNF56Q15929 161 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 CNPY1Q3B7I2 92 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 PQLC2Q6ZP29 291 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 C5orf17Q8NAS9 161 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 SPACA4Q8TDM5 124 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 PHLDA3Q9Y5J5 127 aa7.32□□□□□ -1.24
SDCBP-211ENST00000523441 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.31□□□□□ -1.24
SDCBP-211ENST00000523441 SSTP61278 116 aa7.31□□□□□ -1.24
SDCBP-211ENST00000523441 CIRBPQ14011 172 aaKnown RBP7.31□□□□□ -1.24
SDCBP-211ENST00000523441 IL36BQ9NZH7 164 aa7.31□□□□□ -1.24
SDCBP-211ENST00000523441 FABP5P3A8MUU1 101 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 SLPIP03973 132 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 TPT1P13693 172 aaKnown RBP7.3□□□□□ -1.24
SDCBP-211ENST00000523441 KRTAP10-8P60410 259 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 RBX1P62877 108 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 COX6A2Q02221 97 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 KRTAP26-1Q6PEX3 210 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 REG3GQ6UW15 175 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 CLRN3Q8NCR9 226 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 SFRP2Q96HF1 295 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 EPDR1Q9UM22 224 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 ARL2-SNX15V9GYD0 113 aa7.3□□□□□ -1.24
SDCBP-211ENST00000523441 SERTM2A0A1B0GWG4 89 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 CNBPP62633 177 aaKnown RBP7.29□□□□□ -1.24
SDCBP-211ENST00000523441 PIK3CD-AS1Q5SR53 167 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 SAPCD1Q5SSQ6 148 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 ARL6IP6Q8N6S5 226 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 STPG4Q8N801 248 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 RNF185Q96GF1 192 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 PLAC8Q9NZF1 115 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 HSPB11Q9Y547 144 aa7.29□□□□□ -1.24
SDCBP-211ENST00000523441 TRBV10-1A0A0K0K1A3 114 aa7.28□□□□□ -1.24
SDCBP-211ENST00000523441 KRBOX1C9JBD0 128 aa7.28□□□□□ -1.24
SDCBP-211ENST00000523441 F5H697 171 aa7.28□□□□□ -1.24
SDCBP-211ENST00000523441 CDC34P49427 236 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-211ENST00000523441 REG3AQ06141 175 aa7.28□□□□□ -1.24
SDCBP-211ENST00000523441 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.28□□□□□ -1.24
SDCBP-211ENST00000523441 MUC21A0A140T8X8 626 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 SH2D1AO60880 128 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 IFNA7P01567 189 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 GCHFRP30047 84 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 HIGD2BQ4VC39 106 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 NTM-AS1Q6ZSK4 140 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 PRSS3P2Q8NHM4 247 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 DERL1Q9BUN8 251 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 WFDC1Q9HC57 220 aa7.27□□□□□ -1.25
SDCBP-211ENST00000523441 IGKV3OR2-268A0A0C4DH90 116 aa7.26□□□□□ -1.25
SDCBP-211ENST00000523441 FAM240BA0A1B0GVZ2 78 aa7.26□□□□□ -1.25
SDCBP-211ENST00000523441 CRIP1P50238 77 aa7.26□□□□□ -1.25
SDCBP-211ENST00000523441 UBE2G2P60604 165 aa7.26□□□□□ -1.25
SDCBP-211ENST00000523441 ZFP82Q8N141 532 aa7.26□□□□□ -1.25
SDCBP-211ENST00000523441 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
SDCBP-211ENST00000523441 TRBV25-1A0A075B6N4 114 aa7.25□□□□□ -1.25
SDCBP-211ENST00000523441 RPL12P30050 165 aaKnown RBP7.25□□□□□ -1.25
SDCBP-211ENST00000523441 PKIAP61925 76 aa7.25□□□□□ -1.25
SDCBP-211ENST00000523441 SPINK6Q6UWN8 80 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms