RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ZNF747Q9BV97 191 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 FLNBO75369 2602 aaKnown RBP10□□□□□ -0.81
PCDHGB1-201ENST00000523390 CCL25O15444 150 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 IGLV2-8P01709 118 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 KLF5Q13887 457 aaPredicted RBP10□□□□□ -0.81
PCDHGB1-201ENST00000523390 LINC00173Q6ZV60 143 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 LRRC75A-AS1Q8N1F1 130 aa10□□□□□ -0.81
PCDHGB1-201ENST00000523390 TMEM89A2RUT3 159 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 GAGE6Q13070 117 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 LGALS9BQ3B8N2 356 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 LGALS9CQ6DKI2 356 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 HLA-DRB4P13762 266 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 HLA-DRB4X5D2U9 266 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 APOC4P55056 127 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 TRBV25-1A0A075B6N4 114 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 C19orf71A6NCJ1 209 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 ZNF80P51504 273 aaPredicted RBP9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 DLX4Q92988 240 aaPredicted RBP9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 TP53TG3Q9ULZ0 132 aa9.99□□□□□ -0.81
PCDHGB1-201ENST00000523390 ADAMTSL5Q6ZMM2 481 aa9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 Q8N1Y9 231 aa9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 RNASE8Q8TDE3 154 aaKnown RBP9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 F8VRH5 84 aa9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 KIR3DS1Q14943 382 aa9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 TMEM141Q96I45 108 aa9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 VCANP13611 3396 aa9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 Q6YL49 198 aa9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 ERG28Q9UKR5 140 aa9.98□□□□□ -0.81
PCDHGB1-201ENST00000523390 ZNF493Q6ZR52 646 aa9.97□□□□□ -0.81
PCDHGB1-201ENST00000523390 TMEM243Q9BU79 118 aa9.97□□□□□ -0.81
PCDHGB1-201ENST00000523390 TP73-AS1Q9UF72 201 aa9.97□□□□□ -0.81
PCDHGB1-201ENST00000523390 ANKRD17O75179 2603 aaKnown RBP9.97□□□□□ -0.81
PCDHGB1-201ENST00000523390 PAX4O43316 350 aa9.97□□□□□ -0.81
PCDHGB1-201ENST00000523390 HIST2H2BDQ6DRA6 164 aa9.97□□□□□ -0.81
PCDHGB1-201ENST00000523390 TMEM86BQ8N661 226 aa9.97□□□□□ -0.81
PCDHGB1-201ENST00000523390 Q8N6K4 173 aa9.97□□□□□ -0.81
PCDHGB1-201ENST00000523390 PAX2Q02962 417 aa9.96□□□□□ -0.81
PCDHGB1-201ENST00000523390 CLPSL1A2RUU4 121 aa9.96□□□□□ -0.81
PCDHGB1-201ENST00000523390 VWC2LB2RUY7 222 aa9.96□□□□□ -0.81
PCDHGB1-201ENST00000523390 MYMXA0A1B0GTQ4 84 aa9.96□□□□□ -0.82
PCDHGB1-201ENST00000523390 RBMY1BA6NDE4 496 aaKnown RBP9.96□□□□□ -0.82
PCDHGB1-201ENST00000523390 RBMY1EA6NEQ0 496 aaKnown RBP9.96□□□□□ -0.82
PCDHGB1-201ENST00000523390 RBMY1DP0C7P1 496 aaKnown RBP9.96□□□□□ -0.82
PCDHGB1-201ENST00000523390 RBMY1A1P0DJD3 496 aaKnown RBP9.96□□□□□ -0.82
PCDHGB1-201ENST00000523390 RBMY1CP0DJD4 496 aa9.96□□□□□ -0.82
PCDHGB1-201ENST00000523390 SUMO4Q6EEV6 95 aa9.96□□□□□ -0.82
PCDHGB1-201ENST00000523390 KRTAP10-9P60411 292 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 A0A0J9YX75 114 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 SS18Q15532 418 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 Q6ZS46 218 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 C4orf3Q8WVX3 66 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 ADAMTS20P59510 1910 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 CFAP54Q96N23 3096 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 PRSS29PA6NIE9 313 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 AVPP01185 164 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 CTRLP40313 264 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 UBE2DNLQ8IWF7 75 aa9.95□□□□□ -0.82
PCDHGB1-201ENST00000523390 A0A0J9YY99 117 aa9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 MLST8Q9BVC4 326 aa9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 SPEGQ15772 3267 aa9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 TRBV6-1A0A0K0K1D8 114 aa9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 IGKV2-29A2NJV5 120 aaPredicted RBP9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 COX8AP10176 69 aa9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 C9orf66Q5T8R8 295 aa9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 SRSF2Q01130 221 aaKnown RBP9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 JPT2Q9H910 190 aa9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 MDFICQ9P1T7 246 aa9.94□□□□□ -0.82
PCDHGB1-201ENST00000523390 RAI1Q7Z5J4 1906 aaPredicted RBP9.93□□□□□ -0.82
PCDHGB1-201ENST00000523390 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.93□□□□□ -0.82
PCDHGB1-201ENST00000523390 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
PCDHGB1-201ENST00000523390 CST9LQ9H4G1 147 aa9.93□□□□□ -0.82
PCDHGB1-201ENST00000523390 PIFOQ8TCI5 191 aa9.92□□□□□ -0.82
PCDHGB1-201ENST00000523390 LAMA1P25391 3075 aa9.92□□□□□ -0.82
PCDHGB1-201ENST00000523390 CD5LO43866 347 aa9.92□□□□□ -0.82
PCDHGB1-201ENST00000523390 MYCNOSP40205 109 aa9.92□□□□□ -0.82
PCDHGB1-201ENST00000523390 Q6ZSV7 163 aa9.92□□□□□ -0.82
PCDHGB1-201ENST00000523390 CLPSL2Q6UWE3 100 aa9.92□□□□□ -0.82
PCDHGB1-201ENST00000523390 RHOHQ15669 191 aa9.92□□□□□ -0.82
PCDHGB1-201ENST00000523390 OCIAD2Q56VL3 154 aa9.91□□□□□ -0.82
PCDHGB1-201ENST00000523390 MRAPQ8TCY5 172 aa9.91□□□□□ -0.82
PCDHGB1-201ENST00000523390 SZT2Q5T011 3432 aa9.91□□□□□ -0.82
PCDHGB1-201ENST00000523390 LINC00310P59036 64 aa9.91□□□□□ -0.82
PCDHGB1-201ENST00000523390 S100A7L2Q5SY68 101 aa9.91□□□□□ -0.82
PCDHGB1-201ENST00000523390 SMAD5-AS1Q9Y6J3 95 aa9.91□□□□□ -0.82
PCDHGB1-201ENST00000523390 INAFM1C9JVW0 142 aa9.9□□□□□ -0.82
PCDHGB1-201ENST00000523390 GDF5OSQ5U4N7 250 aa9.9□□□□□ -0.82
PCDHGB1-201ENST00000523390 C20orf173Q96LM9 149 aa9.9□□□□□ -0.82
PCDHGB1-201ENST00000523390 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
PCDHGB1-201ENST00000523390 PCP2Q8IVA1 136 aa9.9□□□□□ -0.82
PCDHGB1-201ENST00000523390 ESM1Q9NQ30 184 aa9.9□□□□□ -0.82
PCDHGB1-201ENST00000523390 PFN2P35080 140 aa9.9□□□□□ -0.82
PCDHGB1-201ENST00000523390 MAP6D1Q9H9H5 199 aa9.9□□□□□ -0.82
PCDHGB1-201ENST00000523390 TRAV25A0A0B4J276 109 aa9.9□□□□□ -0.83
PCDHGB1-201ENST00000523390 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 K7EQG2 157 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 RNF152Q8N8N0 203 aa9.89□□□□□ -0.83
PCDHGB1-201ENST00000523390 MBD6Q96DN6 1003 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms