RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 CENPWQ5EE01 88 aa10.23□□□□□ -0.77
PCM1-218ENST00000523055 ALKAL2Q6UX46 152 aa10.23□□□□□ -0.77
PCM1-218ENST00000523055 C14orf178Q8N769 122 aaPredicted RBP10.23□□□□□ -0.77
PCM1-218ENST00000523055 PRADC1Q9BSG0 188 aa10.23□□□□□ -0.77
PCM1-218ENST00000523055 PHLDA3Q9Y5J5 127 aa10.23□□□□□ -0.77
PCM1-218ENST00000523055 A0A087WWL8 130 aa10.22□□□□□ -0.77
PCM1-218ENST00000523055 IGLV2-8P01709 118 aa10.22□□□□□ -0.77
PCM1-218ENST00000523055 XGP55808 180 aa10.22□□□□□ -0.77
PCM1-218ENST00000523055 MEF2BQ02080 365 aaPredicted RBP10.22□□□□□ -0.77
PCM1-218ENST00000523055 PIK3CD-AS1Q5SR53 167 aa10.22□□□□□ -0.77
PCM1-218ENST00000523055 FAM74A4Q5TZK3 123 aa10.22□□□□□ -0.77
PCM1-218ENST00000523055 Q6ZRN7 208 aaPredicted RBP10.22□□□□□ -0.77
PCM1-218ENST00000523055 RAB19A4D1S5 217 aa10.21□□□□□ -0.78
PCM1-218ENST00000523055 TEX46H3BTG2 121 aa10.21□□□□□ -0.78
PCM1-218ENST00000523055 CIDEAO60543 219 aa10.21□□□□□ -0.78
PCM1-218ENST00000523055 BCL2P10415 239 aa10.21□□□□□ -0.78
PCM1-218ENST00000523055 ZFP2Q6ZN57 461 aa10.21□□□□□ -0.78
PCM1-218ENST00000523055 SYT8Q8NBV8 401 aa10.21□□□□□ -0.78
PCM1-218ENST00000523055 OR10AG1Q8NH19 301 aa10.21□□□□□ -0.78
PCM1-218ENST00000523055 LY96Q9Y6Y9 160 aa10.21□□□□□ -0.78
PCM1-218ENST00000523055 TRBV20OR9-2A0A075B6H5 130 aa10.2□□□□□ -0.78
PCM1-218ENST00000523055 MUC21A0A0G2JKD1 596 aa10.2□□□□□ -0.78
PCM1-218ENST00000523055 MUC21A0A140T8X8 626 aa10.2□□□□□ -0.78
PCM1-218ENST00000523055 SFRP2Q96HF1 295 aa10.2□□□□□ -0.78
PCM1-218ENST00000523055 GAGE12JA6NER3 117 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 CRYGDP07320 174 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 DNAH10OSP0CZ25 163 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 LINC00694P0DN24 101 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 GAGE1Q13065 139 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 GAGE4Q13068 117 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 GAGE5Q13069 117 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 GAGE13Q4V321 117 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 Q5VSD8 79 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 ZFP82Q8N141 532 aa10.19□□□□□ -0.78
PCM1-218ENST00000523055 IFNA1P01562 189 aa10.18□□□□□ -0.78
PCM1-218ENST00000523055 BTF3P20290 206 aaKnown RBP10.18□□□□□ -0.78
PCM1-218ENST00000523055 TIRAPP58753 221 aa10.18□□□□□ -0.78
PCM1-218ENST00000523055 ATP6V0E2Q8NHE4 81 aa10.18□□□□□ -0.78
PCM1-218ENST00000523055 RHODO00212 210 aa10.17□□□□□ -0.78
PCM1-218ENST00000523055 PDE6DO43924 150 aa10.17□□□□□ -0.78
PCM1-218ENST00000523055 CXCL1P09341 107 aa10.17□□□□□ -0.78
PCM1-218ENST00000523055 GZMBP10144 247 aa10.17□□□□□ -0.78
PCM1-218ENST00000523055 SSTP61278 116 aa10.17□□□□□ -0.78
PCM1-218ENST00000523055 Q8N3U1 123 aa10.17□□□□□ -0.78
PCM1-218ENST00000523055 MED9Q9NWA0 146 aa10.17□□□□□ -0.78
PCM1-218ENST00000523055 VAX2Q9UIW0 290 aa10.17□□□□□ -0.78
PCM1-218ENST00000523055 IGHV3-38A0A0C4DH36 116 aa10.16□□□□□ -0.78
PCM1-218ENST00000523055 SNAI2O43623 268 aa10.16□□□□□ -0.78
PCM1-218ENST00000523055 EVI2AP22794 236 aa10.16□□□□□ -0.78
PCM1-218ENST00000523055 GNG4P50150 75 aa10.16□□□□□ -0.78
PCM1-218ENST00000523055 OR10J3Q5JRS4 329 aa10.16□□□□□ -0.78
PCM1-218ENST00000523055 GTSF1LQ9H1H1 148 aa10.16□□□□□ -0.78
PCM1-218ENST00000523055 C19orf71A6NCJ1 209 aa10.16□□□□□ -0.78
PCM1-218ENST00000523055 LELP1Q5T871 98 aa10.16□□□□□ -0.78
PCM1-218ENST00000523055 SSBP4Q9BWG4 385 aaPredicted RBP10.16□□□□□ -0.78
PCM1-218ENST00000523055 RBFOX3A6NFN3 312 aa10.15□□□□□ -0.79
PCM1-218ENST00000523055 IGHV3-30P01768 117 aa10.15□□□□□ -0.79
PCM1-218ENST00000523055 IGHV3-33P01772 117 aa10.15□□□□□ -0.79
PCM1-218ENST00000523055 OR5AL1P0C617 328 aa10.15□□□□□ -0.79
PCM1-218ENST00000523055 IGHV3-30-3P0DP02 117 aa10.15□□□□□ -0.79
PCM1-218ENST00000523055 IGHV3-30-5P0DP03 117 aa10.15□□□□□ -0.79
PCM1-218ENST00000523055 FUSP35637 526 aaKnown RBP eCLIP10.15□□□□□ -0.79
PCM1-218ENST00000523055 MSRB1Q9NZV6 116 aa10.15□□□□□ -0.79
PCM1-218ENST00000523055 TRAV9-2A0A087WT02 112 aa10.14□□□□□ -0.79
PCM1-218ENST00000523055 TRAV8-6A0A0B4J262 113 aa10.14□□□□□ -0.79
PCM1-218ENST00000523055 LINC01556Q5JQF7 62 aa10.14□□□□□ -0.79
PCM1-218ENST00000523055 OR2D3Q8NGH3 330 aa10.14□□□□□ -0.79
PCM1-218ENST00000523055 IGLC6P0CF74 106 aa10.13□□□□□ -0.79
PCM1-218ENST00000523055 SPANXN1Q5VSR9 72 aa10.13□□□□□ -0.79
PCM1-218ENST00000523055 LYPD6BQ8NI32 183 aa10.13□□□□□ -0.79
PCM1-218ENST00000523055 TPPP3Q9BW30 176 aa10.13□□□□□ -0.79
PCM1-218ENST00000523055 K7EN84 100 aa10.12□□□□□ -0.79
PCM1-218ENST00000523055 BLOC1S1P78537 153 aa10.12□□□□□ -0.79
PCM1-218ENST00000523055 ZNF56Q15929 161 aa10.12□□□□□ -0.79
PCM1-218ENST00000523055 DAZAP1Q96EP5 407 aaKnown RBP10.12□□□□□ -0.79
PCM1-218ENST00000523055 SMIM12Q96EX1 92 aa10.12□□□□□ -0.79
PCM1-218ENST00000523055 C10orf126Q8N4M7 172 aa10.11□□□□□ -0.79
PCM1-218ENST00000523055 FRZBQ92765 325 aa10.11□□□□□ -0.79
PCM1-218ENST00000523055 DNAH8Q96JB1 4490 aa10.11□□□□□ -0.79
PCM1-218ENST00000523055 K7EP13 123 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 P01737 135 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 TAGLN2P37802 199 aaKnown RBP10.1□□□□□ -0.79
PCM1-218ENST00000523055 TOR2AQ5JU69 321 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 NFE4Q86UQ8 179 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 FER1L6-AS1Q8NA97 138 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 OCC1Q8TAD7 63 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 RNASE7Q9H1E1 156 aaKnown RBP10.1□□□□□ -0.79
PCM1-218ENST00000523055 Q9HAA7 133 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 KIF25-AS1Q9Y6Z4 181 aa10.1□□□□□ -0.79
PCM1-218ENST00000523055 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
PCM1-218ENST00000523055 IBA57-AS1B1ANH7 110 aa10.09□□□□□ -0.79
PCM1-218ENST00000523055 UBE2D3P61077 147 aa10.09□□□□□ -0.79
PCM1-218ENST00000523055 UBE2D2P62837 147 aa10.09□□□□□ -0.79
PCM1-218ENST00000523055 NUDT10Q8NFP7 164 aa10.09□□□□□ -0.79
PCM1-218ENST00000523055 NUDT11Q96G61 164 aa10.09□□□□□ -0.79
PCM1-218ENST00000523055 A0A087WTM6 91 aa10.08□□□□□ -0.8
PCM1-218ENST00000523055 TRBV10-1A0A0K0K1A3 114 aa10.08□□□□□ -0.8
PCM1-218ENST00000523055 CEBPGP53567 150 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms