RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 ERVFC1-1P60608 527 aa6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 ZNF876PQ49A33 203 aa6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 FAM74A3Q4VXF1 159 aa6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 CENPWQ5EE01 88 aa6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 Q6ZRN7 208 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 NFE4Q86UQ8 179 aa6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 BAGE2Q86Y30 109 aa6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 MSRB1Q9NZV6 116 aa6.96□□□□□ -1.3
CTNNA1-235ENST00000522730 TRBV20OR9-2A0A075B6H5 130 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 F8W036 122 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 CRYGDP07320 174 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 DNAH10OSP0CZ25 163 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 GNG4P50150 75 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 SAPCD1Q5SSQ6 148 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 SEC11CQ9BY50 192 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 C11orf21Q9P2W6 132 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 ZFP30Q9Y2G7 519 aa6.95□□□□□ -1.3
CTNNA1-235ENST00000522730 PGPEP1LA6NFU8 196 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 IGLV2-8P01709 118 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 TMEM241Q24JQ0 296 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 SMUG1Q53HV7 270 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 OR10J3Q5JRS4 329 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 C10orf91Q5T1B1 145 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 Q8N1X5 172 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 SLC25A29Q8N8R3 303 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 OCC1Q8TAD7 63 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 SMIM12Q96EX1 92 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 MLST8Q9BVC4 326 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 NAT8Q9UHE5 227 aa6.94□□□□□ -1.3
CTNNA1-235ENST00000522730 A0A087WTM6 91 aa6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 KRBOX1C9JBD0 128 aa6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 PSCAO43653 123 aa6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 PFN1P07737 140 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 GATA1P15976 413 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 S100A4P26447 101 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 CFAP126Q5VTH2 177 aa6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 CDPF1Q6NVV7 123 aa6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 LINC01551Q86U37 167 aa6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 PRADC1Q9BSG0 188 aa6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 CARHSP1Q9Y2V2 147 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-235ENST00000522730 TRAV8-6A0A0B4J262 113 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 IGHV3-38A0A0C4DH36 116 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 K7EN84 100 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 RS1O15537 224 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 IGHV3-30P01768 117 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 IGHV3-33P01772 117 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 IGHV3-30-3P0DP02 117 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 IGHV3-30-5P0DP03 117 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 MGST1P10620 155 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 RPL23P62829 140 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 COX8CQ7Z4L0 72 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 SH2D6Q7Z4S9 175 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 ZC2HC1AQ96GY0 325 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 Q9HAA7 133 aa6.92□□□□□ -1.3
CTNNA1-235ENST00000522730 ADIRFQ15847 76 aa6.91□□□□□ -1.3
CTNNA1-235ENST00000522730 Q6ZSN1 163 aa6.91□□□□□ -1.3
CTNNA1-235ENST00000522730 C10orf126Q8N4M7 172 aa6.91□□□□□ -1.3
CTNNA1-235ENST00000522730 BIN3Q9NQY0 253 aa6.91□□□□□ -1.3
CTNNA1-235ENST00000522730 TRBV6-4A0A1B0GX49 114 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 GAGE12JA6NER3 117 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 FABP5P3A8MUU1 101 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 ATP6V1G1O75348 118 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 RNASE3P12724 160 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 CRIP1P50238 77 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 KRTAP10-1P60331 282 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 PNRC1Q12796 327 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 GAGE1Q13065 139 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 GAGE4Q13068 117 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 GAGE5Q13069 117 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 RHOHQ15669 191 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 GAGE13Q4V321 117 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 PRR27Q6MZM9 219 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 ATP6V0E2Q8NHE4 81 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 ISOC2Q96AB3 205 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 C9orf85Q96MD7 179 aa6.9□□□□□ -1.3
CTNNA1-235ENST00000522730 IGKV3D-20A0A0C4DH25 116 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 GRIFINA4D1Z8 144 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 EPM2AB3EWF7 344 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 K7EP13 123 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 M0R036 132 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 SH2D1AO60880 128 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 APOC3P02656 99 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 GCSHP23434 173 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 ASIPP42127 132 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 FAM162BQ5T6X4 162 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 GTSF1LQ9H1H1 148 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 JPT2Q9H910 190 aa6.89□□□□□ -1.31
CTNNA1-235ENST00000522730 SRRM2Q9UQ35 2752 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 TMSB15BA0A087X1C1 80 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 C19orf71A6NCJ1 209 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 IBA57-AS1B1ANH7 110 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 B4DEV8 164 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 CIDEAO60543 219 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 XGP55808 180 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 TIRAPP58753 221 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 HAMPP81172 84 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 FAM231DQ6ZW35 169 aa6.88□□□□□ -1.31
CTNNA1-235ENST00000522730 SVBPQ8N300 66 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms