RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TPT1P13693 172 aaKnown RBP13.84□□□□□ -0.19
SDCBP-209ENST00000522243 LINC01559Q495D7 138 aa13.84□□□□□ -0.19
SDCBP-209ENST00000522243 GCSHP23434 173 aa13.83□□□□□ -0.2
SDCBP-209ENST00000522243 MBD3L1Q8WWY6 194 aa13.83□□□□□ -0.2
SDCBP-209ENST00000522243 TCEAL7Q9BRU2 100 aa13.83□□□□□ -0.2
SDCBP-209ENST00000522243 IGLV5-52A0A0A0MRZ9 124 aa13.82□□□□□ -0.2
SDCBP-209ENST00000522243 SCO2A0A1W2PP80 73 aa13.82□□□□□ -0.2
SDCBP-209ENST00000522243 KANTRA0A1W2PQU2 76 aa13.82□□□□□ -0.2
SDCBP-209ENST00000522243 HMSDA8MTL9 139 aa13.82□□□□□ -0.2
SDCBP-209ENST00000522243 EPM2AB3EWF7 344 aa13.82□□□□□ -0.2
SDCBP-209ENST00000522243 RHODO00212 210 aa13.82□□□□□ -0.2
SDCBP-209ENST00000522243 SFRP2Q96HF1 295 aa13.82□□□□□ -0.2
SDCBP-209ENST00000522243 A0A0D9SG52 128 aa13.81□□□□□ -0.2
SDCBP-209ENST00000522243 UMAD1C9J7I0 102 aa13.81□□□□□ -0.2
SDCBP-209ENST00000522243 BCL2L11O43521 198 aa13.81□□□□□ -0.2
SDCBP-209ENST00000522243 DAZ4Q86SG3 579 aaKnown RBP13.81□□□□□ -0.2
SDCBP-209ENST00000522243 DAZ3Q9NR90 486 aaKnown RBP13.81□□□□□ -0.2
SDCBP-209ENST00000522243 RPL19P84098 196 aaKnown RBP13.8□□□□□ -0.2
SDCBP-209ENST00000522243 ZFP82Q8N141 532 aa13.8□□□□□ -0.2
SDCBP-209ENST00000522243 Q8N814 137 aa13.8□□□□□ -0.2
SDCBP-209ENST00000522243 HAMPP81172 84 aa13.79□□□□□ -0.2
SDCBP-209ENST00000522243 LAGE3Q14657 143 aa13.79□□□□□ -0.2
SDCBP-209ENST00000522243 PFDN1O60925 122 aa13.78□□□□□ -0.2
SDCBP-209ENST00000522243 H2AFB1P0C5Y9 115 aa13.78□□□□□ -0.2
SDCBP-209ENST00000522243 A0A087WWC5 75 aa13.77□□□□□ -0.21
SDCBP-209ENST00000522243 S100A9P06702 114 aaKnown RBP13.77□□□□□ -0.21
SDCBP-209ENST00000522243 BAGE2Q86Y30 109 aa13.77□□□□□ -0.21
SDCBP-209ENST00000522243 TM2D2Q9BX73 214 aa13.77□□□□□ -0.21
SDCBP-209ENST00000522243 SMR3BP02814 79 aaPredicted RBP13.76□□□□□ -0.21
SDCBP-209ENST00000522243 WFDC2Q14508 124 aa13.76□□□□□ -0.21
SDCBP-209ENST00000522243 TMUB2Q71RG4 321 aa13.76□□□□□ -0.21
SDCBP-209ENST00000522243 NTN5Q8WTR8 489 aaPredicted RBP13.76□□□□□ -0.21
SDCBP-209ENST00000522243 TRAV8-3A0A0A6YYJ7 113 aa13.75□□□□□ -0.21
SDCBP-209ENST00000522243 EIF5AP63241 154 aaKnown RBP13.75□□□□□ -0.21
SDCBP-209ENST00000522243 PRR27Q6MZM9 219 aa13.75□□□□□ -0.21
SDCBP-209ENST00000522243 OR10AG1Q8NH19 301 aa13.75□□□□□ -0.21
SDCBP-209ENST00000522243 MLST8Q9BVC4 326 aa13.75□□□□□ -0.21
SDCBP-209ENST00000522243 MUC21A0A0G2JKD1 596 aa13.74□□□□□ -0.21
SDCBP-209ENST00000522243 MUC21A0A140T8X8 626 aa13.74□□□□□ -0.21
SDCBP-209ENST00000522243 LECT2O14960 151 aa13.74□□□□□ -0.21
SDCBP-209ENST00000522243 Q5VSD8 79 aa13.74□□□□□ -0.21
SDCBP-209ENST00000522243 SSTP61278 116 aa13.73□□□□□ -0.21
SDCBP-209ENST00000522243 CCL20P78556 96 aa13.73□□□□□ -0.21
SDCBP-209ENST00000522243 RPL36AP83881 106 aaKnown RBP13.73□□□□□ -0.21
SDCBP-209ENST00000522243 TOR2AQ5JU69 321 aa13.73□□□□□ -0.21
SDCBP-209ENST00000522243 NIT1Q86X76 327 aa13.73□□□□□ -0.21
SDCBP-209ENST00000522243 FRZBQ92765 325 aa13.73□□□□□ -0.21
SDCBP-209ENST00000522243 RPL36ALQ969Q0 106 aaKnown RBP13.73□□□□□ -0.21
SDCBP-209ENST00000522243 DNAJC30Q96LL9 226 aa13.73□□□□□ -0.21
SDCBP-209ENST00000522243 URGCP-MRPS24S4R325 110 aa13.73□□□□□ -0.21
SDCBP-209ENST00000522243 ZNF56Q15929 161 aa13.72□□□□□ -0.21
SDCBP-209ENST00000522243 GNG13Q9P2W3 67 aa13.72□□□□□ -0.21
SDCBP-209ENST00000522243 KLK12Q9UKR0 248 aa13.72□□□□□ -0.21
SDCBP-209ENST00000522243 TRBV7-3A0A075B6L6 115 aa13.71□□□□□ -0.21
SDCBP-209ENST00000522243 TRBV10-1A0A0K0K1A3 114 aa13.71□□□□□ -0.21
SDCBP-209ENST00000522243 INAFM2P0DMQ5 153 aa13.71□□□□□ -0.21
SDCBP-209ENST00000522243 UBE2D3P61077 147 aa13.71□□□□□ -0.21
SDCBP-209ENST00000522243 UBE2D2P62837 147 aa13.71□□□□□ -0.21
SDCBP-209ENST00000522243 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
SDCBP-209ENST00000522243 SNAI2O43623 268 aa13.7□□□□□ -0.22
SDCBP-209ENST00000522243 CXCL1P09341 107 aa13.7□□□□□ -0.22
SDCBP-209ENST00000522243 RPL35P42766 123 aaKnown RBP13.7□□□□□ -0.22
SDCBP-209ENST00000522243 BAALCQ8WXS3 180 aa13.7□□□□□ -0.22
SDCBP-209ENST00000522243 FAM30AQ9NZY2 134 aa13.7□□□□□ -0.22
SDCBP-209ENST00000522243 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.69□□□□□ -0.22
SDCBP-209ENST00000522243 RAB4BP61018 213 aa13.69□□□□□ -0.22
SDCBP-209ENST00000522243 SPANXN1Q5VSR9 72 aa13.69□□□□□ -0.22
SDCBP-209ENST00000522243 NEXN-AS1Q8NBZ9 246 aa13.69□□□□□ -0.22
SDCBP-209ENST00000522243 TMEM70Q9BUB7 260 aa13.69□□□□□ -0.22
SDCBP-209ENST00000522243 SSBP4Q9BWG4 385 aaPredicted RBP13.69□□□□□ -0.22
SDCBP-209ENST00000522243 MANBALQ9NQG1 85 aa13.69□□□□□ -0.22
SDCBP-209ENST00000522243 IGKV2D-24A0A075B6R9 120 aa13.68□□□□□ -0.22
SDCBP-209ENST00000522243 A0A087WX48 190 aa13.68□□□□□ -0.22
SDCBP-209ENST00000522243 OR5AL1P0C617 328 aa13.68□□□□□ -0.22
SDCBP-209ENST00000522243 OR10G8Q8NGN5 311 aa13.68□□□□□ -0.22
SDCBP-209ENST00000522243 UBE2WQ96B02 151 aa13.68□□□□□ -0.22
SDCBP-209ENST00000522243 F5H697 171 aa13.67□□□□□ -0.22
SDCBP-209ENST00000522243 RMI2Q96E14 147 aa13.67□□□□□ -0.22
SDCBP-209ENST00000522243 TMEM262E9PQX1 116 aa13.66□□□□□ -0.22
SDCBP-209ENST00000522243 KCNIP4Q6PIL6 250 aa13.66□□□□□ -0.22
SDCBP-209ENST00000522243 C11orf52Q96A22 123 aa13.66□□□□□ -0.22
SDCBP-209ENST00000522243 COX11Q9Y6N1 276 aa13.66□□□□□ -0.22
SDCBP-209ENST00000522243 GZMBP10144 247 aa13.65□□□□□ -0.22
SDCBP-209ENST00000522243 CENPWQ5EE01 88 aa13.65□□□□□ -0.22
SDCBP-209ENST00000522243 TRBV6-8A0A0A6YYG3 113 aa13.64□□□□□ -0.23
SDCBP-209ENST00000522243 TRAV1-1A0A0B4J248 108 aa13.64□□□□□ -0.23
SDCBP-209ENST00000522243 RAB19A4D1S5 217 aa13.64□□□□□ -0.23
SDCBP-209ENST00000522243 RBFOX3A6NFN3 312 aa13.64□□□□□ -0.23
SDCBP-209ENST00000522243 IGLV2-8P01709 118 aa13.64□□□□□ -0.23
SDCBP-209ENST00000522243 RAB5CP51148 216 aa13.64□□□□□ -0.23
SDCBP-209ENST00000522243 ELOBQ15370 118 aa13.64□□□□□ -0.23
SDCBP-209ENST00000522243 CHCHD7Q9BUK0 85 aa13.64□□□□□ -0.23
SDCBP-209ENST00000522243 FAM229AH3BQW9 127 aa13.63□□□□□ -0.23
SDCBP-209ENST00000522243 SULT1A2P50226 295 aa13.63□□□□□ -0.23
SDCBP-209ENST00000522243 LINC01620Q4KN68 170 aa13.63□□□□□ -0.23
SDCBP-209ENST00000522243 EIF5AL1Q6IS14 154 aaKnown RBP13.63□□□□□ -0.23
SDCBP-209ENST00000522243 TPPP3Q9BW30 176 aa13.63□□□□□ -0.23
SDCBP-209ENST00000522243 KIF25-AS1Q9Y6Z4 181 aa13.63□□□□□ -0.23
SDCBP-209ENST00000522243 TEX46H3BTG2 121 aa13.62□□□□□ -0.23
SDCBP-209ENST00000522243 SMIM17P0DL12 118 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms