RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 C7orf66A4D0T2 115 aa5.29□□□□□ -1.56
TRAPPC9-212ENST00000521944 A8MWV9 139 aa5.29□□□□□ -1.56
TRAPPC9-212ENST00000521944 RBX1P62877 108 aa5.29□□□□□ -1.56
TRAPPC9-212ENST00000521944 NTM-AS1Q6ZSK4 140 aa5.29□□□□□ -1.56
TRAPPC9-212ENST00000521944 C15orf56Q8N910 161 aa5.29□□□□□ -1.56
TRAPPC9-212ENST00000521944 C15orf40Q8WUR7 153 aa5.29□□□□□ -1.56
TRAPPC9-212ENST00000521944 BCL7BQ9BQE9 202 aa5.29□□□□□ -1.56
TRAPPC9-212ENST00000521944 RAB26Q9ULW5 256 aa5.29□□□□□ -1.56
TRAPPC9-212ENST00000521944 IFNA7P01567 189 aa5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 RPS10P46783 165 aaKnown RBP5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 CSN1S1P47710 185 aa5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 TAS2R30P59541 319 aa5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 PIK3CD-AS1Q5SR53 167 aa5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 DYNC2LI1Q8TCX1 351 aa5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 DIRAS2Q96HU8 199 aa5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 TREM1Q9NP99 234 aa5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 MCUBQ9NWR8 336 aa5.28□□□□□ -1.56
TRAPPC9-212ENST00000521944 CTDSP2O14595 271 aa5.27□□□□□ -1.57
TRAPPC9-212ENST00000521944 RAB5CP51148 216 aa5.27□□□□□ -1.57
TRAPPC9-212ENST00000521944 MRPS10P82664 201 aaKnown RBP5.27□□□□□ -1.57
TRAPPC9-212ENST00000521944 LGALSLQ3ZCW2 172 aaPredicted RBP5.27□□□□□ -1.57
TRAPPC9-212ENST00000521944 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
TRAPPC9-212ENST00000521944 IGLV1-50A0A075B6I6 118 aa5.26□□□□□ -1.57
TRAPPC9-212ENST00000521944 TRBV7-3A0A075B6L6 115 aa5.26□□□□□ -1.57
TRAPPC9-212ENST00000521944 CST7O76096 145 aa5.26□□□□□ -1.57
TRAPPC9-212ENST00000521944 PTTG1O95997 202 aa5.26□□□□□ -1.57
TRAPPC9-212ENST00000521944 LINC01547P58512 204 aaPredicted RBP5.26□□□□□ -1.57
TRAPPC9-212ENST00000521944 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
TRAPPC9-212ENST00000521944 C11orf1Q9H5F2 150 aa5.26□□□□□ -1.57
TRAPPC9-212ENST00000521944 IGKV3D-20A0A0C4DH25 116 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 A0A1W2PNN7 141 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 TSPAN13O95857 204 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 REG3AQ06141 175 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 GOLT1AQ6ZVE7 132 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 C20orf203Q8NBC4 194 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 OR10G8Q8NGN5 311 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 SGK494Q96LW2 274 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 HYLS1Q96M11 299 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 CHCHD5Q9BSY4 110 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 FUNDC2Q9BWH2 189 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 SLIRPQ9GZT3 109 aaKnown RBP5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 UQCC1Q9NVA1 299 aa5.25□□□□□ -1.57
TRAPPC9-212ENST00000521944 TRBV10-1A0A0K0K1A3 114 aa5.24□□□□□ -1.57
TRAPPC9-212ENST00000521944 UBE2L5PA0A1B0GUS4 154 aa5.24□□□□□ -1.57
TRAPPC9-212ENST00000521944 GAGE6Q13070 117 aa5.24□□□□□ -1.57
TRAPPC9-212ENST00000521944 HIGD2BQ4VC39 106 aa5.24□□□□□ -1.57
TRAPPC9-212ENST00000521944 FAM74A4Q5TZK3 123 aa5.24□□□□□ -1.57
TRAPPC9-212ENST00000521944 SUN5Q8TC36 379 aa5.24□□□□□ -1.57
TRAPPC9-212ENST00000521944 C9orf170A2RU37 121 aa5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 H0Y9J4 135 aa5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 GNG5P63218 68 aa5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 RPL36AP83881 106 aaKnown RBP5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 BAXQ07812 192 aa5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 FER1L6-AS1Q8NA97 138 aa5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 NEXN-AS1Q8NBZ9 246 aa5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 NPCDR1Q9BY65 106 aa5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 NMES1Q9C002 83 aa5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 NAA50Q9GZZ1 169 aaKnown RBP5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 RABL2AQ9UBK7 228 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC9-212ENST00000521944 IGLV4-60A0A075B6I1 120 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 TRAV8-4A0A0B4J246 113 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 RHODO00212 210 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 EIF3GO75821 320 aaKnown RBP eCLIP5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 GCGP01275 180 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 P01737 135 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 IGLV7-43P04211 117 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 FGF7P21781 194 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 S100A10P60903 97 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 CTF1Q16619 201 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 IAH1Q2TAA2 248 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 C1orf137Q5JT78 98 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 AP3S1Q92572 193 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 DIRC1Q969H9 104 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 TRIM63Q969Q1 353 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 SFRP2Q96HF1 295 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 OTORQ9NRC9 128 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 GSKIPQ9P0R6 139 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 LINC00474Q9P2X8 69 aa5.22□□□□□ -1.57
TRAPPC9-212ENST00000521944 GZMBP10144 247 aa5.21□□□□□ -1.58
TRAPPC9-212ENST00000521944 IL18Q14116 193 aa5.21□□□□□ -1.58
TRAPPC9-212ENST00000521944 SPANXN2Q5MJ10 180 aa5.21□□□□□ -1.58
TRAPPC9-212ENST00000521944 PRR27Q6MZM9 219 aa5.21□□□□□ -1.58
TRAPPC9-212ENST00000521944 MITD1Q8WV92 249 aa5.21□□□□□ -1.58
TRAPPC9-212ENST00000521944 VCX3BQ9H321 246 aa5.21□□□□□ -1.58
TRAPPC9-212ENST00000521944 IL36BQ9NZH7 164 aa5.21□□□□□ -1.58
TRAPPC9-212ENST00000521944 GVQW2A0A096LPI5 108 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 IGSF23A1L1A6 192 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 RGS5O15539 181 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 OR7C2O60412 319 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 MT-ND6P03923 174 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 PKIAP61925 76 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 UBE2L3P68036 154 aaKnown RBP5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 C10orf25Q5T742 122 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 MCFD2Q8NI22 146 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 LINC00526Q96FQ7 95 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 SLC25A21Q9BQT8 299 aaPredicted RBP5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 OR5AC2Q9NZP5 309 aa5.2□□□□□ -1.58
TRAPPC9-212ENST00000521944 H3BVH4 76 aa5.19□□□□□ -1.58
TRAPPC9-212ENST00000521944 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms