RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 DEFB114Q30KQ6 69 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 MUC21Q5SSG8 566 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 ESM1Q9NQ30 184 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 YAE1D1Q9NRH1 226 aa4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 ZNF256Q9Y2P7 627 aaPredicted RBP4.95□□□□□ -1.62
CTNNA1-228ENST00000521640 APCP25054 2843 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 CD7P09564 240 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 SMIM17P0DL12 118 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 HNRNPA3P51991 378 aaKnown RBP4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 LINC00315P59091 139 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 Q6ZQT7 251 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 LINC00173Q6ZV60 143 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 TMEM61Q8N0U2 210 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 DLX4Q92988 240 aaPredicted RBP4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 DUX5Q96PT3 197 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 SNHG12Q9BXW3 62 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 GOLT1BQ9Y3E0 138 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 POLQO75417 2590 aa4.94□□□□□ -1.62
CTNNA1-228ENST00000521640 DOPEY2Q9Y3R5 2298 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 ABCA12Q86UK0 2595 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 A0A087WWL8 130 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 TRAV12-1A0A0B4J245 112 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 TRAV12-3A0A0B4J271 114 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 J3KRW8 73 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 CCL24O00175 119 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 DLEU1O43261 78 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 GNRH2O43555 120 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 TFPI2P48307 235 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 DEFB131AP59861 70 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 DEFB1P60022 68 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 DEFB136Q30KP8 78 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 SLC25A34Q6PIV7 304 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 Q6ZN92 141 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 LINC01006Q8NI28 216 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 RASL10AQ92737 203 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 MAP6D1Q9H9H5 199 aa4.93□□□□□ -1.62
CTNNA1-228ENST00000521640 ITPR3Q14573 2671 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 CELSR2Q9HCU4 2923 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 TRBV27A0A0K0K1C4 114 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 H7C1H1 209 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 SIVA1O15304 175 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 GAS8-AS1O95177 125 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 COX8AP10176 69 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 PROK1P58294 105 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 SSTP61278 116 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 ZNF415Q09FC8 603 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 SPINK13Q1W4C9 94 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 COL5A1-AS1Q5SY13 56 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 C18orf65Q6ZTR6 163 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 ATOH7Q8N100 152 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 C14orf178Q8N769 122 aaPredicted RBP4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 TMEM158Q8WZ71 300 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 TOMM6Q96B49 74 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 FAM30AQ9NZY2 134 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 CRYBG3Q68DQ2 2970 aa4.92□□□□□ -1.62
CTNNA1-228ENST00000521640 A8MWV9 139 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 RHODO00212 210 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 VCYO14598 125 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 INSP01308 110 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 MGPP08493 103 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 CD28P10747 220 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 GATA1P15976 413 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 PLNP26678 52 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 POLR2KP53803 58 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 RIPPLY3P57055 190 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 NUTF2P61970 127 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 RHOHQ15669 191 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 CD300EQ496F6 205 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 HIST2H2BCQ6DN03 193 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 C12orf54Q6X4T0 127 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 TRPT1Q86TN4 253 aaKnown RBP4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 NDUFA11Q86Y39 141 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 SPXQ9BT56 116 aa4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 TIMM8BQ9Y5J9 83 aaPredicted RBP4.91□□□□□ -1.62
CTNNA1-228ENST00000521640 TRAV12-2A0A075B6T6 113 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 A0A087WX48 190 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 TRAV26-2A0A0B4J265 109 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 hDV102S1A0JD36 115 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 RBMY1BA6NDE4 496 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 RBMY1EA6NEQ0 496 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 CBY3A6NI87 242 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 B5MCH6 92 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 M0R2P5 195 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 DPM2O94777 84 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 NUDT3O95989 172 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 IGKCP01834 107 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 CRYGDP07320 174 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 NPSP0C0P6 89 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 RBMY1DP0C7P1 496 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 NSUN5P1Q3KNT7 163 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 MAJINQ3KP22 176 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 ODF3L2Q3SX64 289 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 PAPPA-AS1Q5QFB9 102 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 SUMO4Q6EEV6 95 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 ERASQ7Z444 233 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 TIMM17AQ99595 171 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 KIR2DL4Q99706 377 aa4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 CITED2Q99967 270 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-228ENST00000521640 MUC4Q99102 2169 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms