RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 LINC01356Q8N9X3 169 aa12.27□□□□□ -0.45
UBR5-207ENST00000520539 C10orf55Q5SWW7 151 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 CD24P25063 80 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 GATA4P43694 442 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 DEFB131AP59861 70 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 VOPP1Q96AW1 172 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 IGHV4OR15-8A0A075B7B6 117 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 A0A087WW49 117 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 SDIM1Q6ZPB5 146 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 ZNF833PQ6ZTB9 187 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 COX7CP15954 63 aa12.26□□□□□ -0.45
UBR5-207ENST00000520539 XCL2Q9UBD3 114 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 C4orf51C9J302 202 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 MT-ATP8P03928 68 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 FAM27E3Q08E93 113 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 CRIPAKQ8N1N5 446 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 IGHV3-16A0A0C4DH30 117 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 IGKV1-16P04430 117 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 P0DMU3 169 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 FAM231AP0DMU4 169 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 FAM231CP0DMU5 169 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 SPAARA0A1B0GVQ0 90 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 TRBV7-3A0A075B6L6 115 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 IGKV1-27A0A075B6S5 117 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 IGF2BP2-AS1Q96M15 143 aa12.25□□□□□ -0.45
UBR5-207ENST00000520539 IGKV1D-43A0A0B4J1Z2 117 aa12.24□□□□□ -0.45
UBR5-207ENST00000520539 IGHV4-4A0A075B6R2 117 aa12.24□□□□□ -0.45
UBR5-207ENST00000520539 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
UBR5-207ENST00000520539 TCL1BO95988 128 aa12.24□□□□□ -0.45
UBR5-207ENST00000520539 CD59P13987 128 aa12.24□□□□□ -0.45
UBR5-207ENST00000520539 IGHV1-18A0A0C4DH31 117 aa12.24□□□□□ -0.45
UBR5-207ENST00000520539 FAM222AQ5U5X8 452 aa12.24□□□□□ -0.45
UBR5-207ENST00000520539 IGHV7-4-1A0A0J9YVY3 117 aa12.23□□□□□ -0.45
UBR5-207ENST00000520539 CLEC2BQ92478 149 aa12.23□□□□□ -0.45
UBR5-207ENST00000520539 NRACQ8N912 160 aa12.23□□□□□ -0.45
UBR5-207ENST00000520539 ZMAT4Q9H898 229 aa12.23□□□□□ -0.45
UBR5-207ENST00000520539 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
UBR5-207ENST00000520539 SAA4P35542 130 aa12.22□□□□□ -0.45
UBR5-207ENST00000520539 RNF185Q96GF1 192 aa12.22□□□□□ -0.45
UBR5-207ENST00000520539 PRR31Q5SQ13 230 aa12.22□□□□□ -0.45
UBR5-207ENST00000520539 MLST8Q9BVC4 326 aa12.22□□□□□ -0.45
UBR5-207ENST00000520539 CD177Q8N6Q3 437 aa12.22□□□□□ -0.45
UBR5-207ENST00000520539 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.45
UBR5-207ENST00000520539 IGLV3-12A0A075B6K2 115 aa12.21□□□□□ -0.45
UBR5-207ENST00000520539 C3orf56Q8N813 242 aa12.21□□□□□ -0.45
UBR5-207ENST00000520539 Q6ZS92 163 aa12.21□□□□□ -0.45
UBR5-207ENST00000520539 MED14OSP0DP75 135 aa12.21□□□□□ -0.46
UBR5-207ENST00000520539 PIK3CD-AS1Q5SR53 167 aa12.21□□□□□ -0.46
UBR5-207ENST00000520539 DEFB121Q5J5C9 76 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 ENHOQ6UWT2 76 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 UBE2D4Q9Y2X8 147 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 PIEZO1Q92508 2521 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 MTORP42345 2549 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 Q6Q795 121 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 IGKV1-12A0A0C4DH73 117 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 IGKV1D-12P01611 117 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 ZNF672Q499Z4 452 aaPredicted RBP12.2□□□□□ -0.46
UBR5-207ENST00000520539 TNS1Q9HBL0 1735 aaKnown RBP12.2□□□□□ -0.46
UBR5-207ENST00000520539 CTRLP40313 264 aa12.2□□□□□ -0.46
UBR5-207ENST00000520539 COL11A2P13942 1736 aaPredicted RBP12.19□□□□□ -0.46
UBR5-207ENST00000520539 Q8NFD4 153 aa12.19□□□□□ -0.46
UBR5-207ENST00000520539 SPRY4Q9C004 299 aa12.19□□□□□ -0.46
UBR5-207ENST00000520539 IGKV2D-26A0A0A0MRZ7 120 aa12.19□□□□□ -0.46
UBR5-207ENST00000520539 PKD1L2Q7Z442 2459 aa12.19□□□□□ -0.46
UBR5-207ENST00000520539 IGHV3-38A0A0C4DH36 116 aa12.19□□□□□ -0.46
UBR5-207ENST00000520539 Q8TCH9 128 aa12.19□□□□□ -0.46
UBR5-207ENST00000520539 C9orf106Q8NAJ2 232 aa12.19□□□□□ -0.46
UBR5-207ENST00000520539 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.18□□□□□ -0.46
UBR5-207ENST00000520539 CLPSL2Q6UWE3 100 aa12.18□□□□□ -0.46
UBR5-207ENST00000520539 CFHR3Q02985 330 aa12.18□□□□□ -0.46
UBR5-207ENST00000520539 ODF1Q14990 250 aa12.18□□□□□ -0.46
UBR5-207ENST00000520539 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
UBR5-207ENST00000520539 RNASE13Q5GAN3 156 aaKnown RBP12.18□□□□□ -0.46
UBR5-207ENST00000520539 LINC00311Q8N616 119 aa12.18□□□□□ -0.46
UBR5-207ENST00000520539 DAND5Q8N907 189 aa12.18□□□□□ -0.46
UBR5-207ENST00000520539 SMIM9A6NGZ8 99 aa12.18□□□□□ -0.46
UBR5-207ENST00000520539 COL5A1P20908 1838 aaPredicted RBP12.18□□□□□ -0.46
UBR5-207ENST00000520539 J3QLI3 93 aa12.18□□□□□ -0.46
UBR5-207ENST00000520539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.17□□□□□ -0.46
UBR5-207ENST00000520539 IGKV2-29A2NJV5 120 aaPredicted RBP12.17□□□□□ -0.46
UBR5-207ENST00000520539 EIF4EBP2Q13542 120 aaPredicted RBP12.17□□□□□ -0.46
UBR5-207ENST00000520539 K7EN84 100 aa12.17□□□□□ -0.46
UBR5-207ENST00000520539 FAM120AOSQ5T036 256 aa12.17□□□□□ -0.46
UBR5-207ENST00000520539 LYPD6Q86Y78 171 aa12.16□□□□□ -0.46
UBR5-207ENST00000520539 ZNF837Q96EG3 531 aaPredicted RBP12.16□□□□□ -0.46
UBR5-207ENST00000520539 ATP6V0E1O15342 81 aa12.16□□□□□ -0.46
UBR5-207ENST00000520539 RPP25Q9BUL9 199 aaKnown RBP12.16□□□□□ -0.46
UBR5-207ENST00000520539 PRO0628Q9UI54 55 aa12.16□□□□□ -0.46
UBR5-207ENST00000520539 COL18A1P39060 1754 aa12.16□□□□□ -0.46
UBR5-207ENST00000520539 SPAG11BQ08648 103 aa12.16□□□□□ -0.46
UBR5-207ENST00000520539 H7C423 109 aa12.16□□□□□ -0.46
UBR5-207ENST00000520539 IGFBP6P24592 240 aaPredicted RBP12.16□□□□□ -0.46
UBR5-207ENST00000520539 IGKV1D-17A0A075B6S4 117 aa12.15□□□□□ -0.46
UBR5-207ENST00000520539 GATA1P15976 413 aaPredicted RBP12.15□□□□□ -0.46
UBR5-207ENST00000520539 MDFICQ9P1T7 246 aa12.15□□□□□ -0.46
UBR5-207ENST00000520539 MIFP14174 115 aa12.15□□□□□ -0.47
UBR5-207ENST00000520539 LMO1P25800 156 aa12.14□□□□□ -0.47
UBR5-207ENST00000520539 NOP10Q9NPE3 64 aaKnown RBP12.14□□□□□ -0.47
UBR5-207ENST00000520539 IGKV1OR2-108A0A075B7D4 117 aa12.14□□□□□ -0.47
UBR5-207ENST00000520539 ASPHD1Q5U4P2 390 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms