RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 MED13LQ71F56 2210 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 TRAV30A0A087WSZ9 112 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 A0A0J9YY99 117 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 TRBV10-1A0A0K0K1A3 114 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 TMEM218A2RU14 115 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 NUPR2A6NF83 97 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 OOSP1A8MZH6 123 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 M0R2N4 97 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 DNAL4O96015 105 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 IGLV3-1P01715 115 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 TFF1P04155 84 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 IQCJQ1A5X6 159 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 S100A7L2Q5SY68 101 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 C12orf73Q69YU5 71 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 SLC48A1Q6P1K1 146 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 ACBD7Q8N6N7 88 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 Q8N8P6 123 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 LINC00526Q96FQ7 95 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 TMEM141Q96I45 108 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 ODF3Q96PU9 254 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 SPANXDQ9BXN6 97 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 MED9Q9NWA0 146 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 TMEM14CQ9P0S9 112 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 TOPAZ1Q8N9V7 1692 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 DAPK1P53355 1430 aa1.15□□□□□ -2.23
SCARNA3-201ENST00000517097 RGPD4Q7Z3J3 1758 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 ABCC10Q5T3U5 1492 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 CDK12Q9NYV4 1490 aaPredicted RBP1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 IGKV3-7A0A075B6H7 116 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 LOC110117498A0A087WWA1 95 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 IFNA17P01571 189 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 IGHV3-30P01768 117 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 GYPBP06028 91 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 IGHV3-30-5P0DP03 117 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 PDE6GP18545 87 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 UBE2G1P62253 170 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 INSL4Q14641 139 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 PCOTHQ58A44 107 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 C9orf116Q5BN46 136 aaPredicted RBP1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 LINC00322Q6ZN03 302 aaPredicted RBP1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 SVBPQ8N300 66 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 TSKUQ8WUA8 353 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 DMAC1Q96GE9 116 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 DSCR8Q96T75 97 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 WFDC10AQ9H1F0 79 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 MRPL36Q9P0J6 103 aaKnown RBP1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 C22orf24Q9Y442 160 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 SNURFQ9Y675 71 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 PRDM2Q13029 1718 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 KDM6BO15054 1643 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 MED13Q9UHV7 2174 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 ZNF609O15014 1411 aa1.14□□□□□ -2.23
SCARNA3-201ENST00000517097 SBF2Q86WG5 1849 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 TRAV23DV6A0A075B6W5 121 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 IGLV3-32A0A0A0MS00 114 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 TCRBV3S1A0A5B6 114 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 M0R143 59 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 SPINK8P0C7L1 97 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 IFITM1P13164 125 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 NPC2P61916 151 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 RPL7L1Q6DKI1 246 aaKnown RBP1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 ZCCHC13Q8WW36 166 aaKnown RBP1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 IFI27L1Q96BM0 104 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 ATG5Q9H1Y0 275 aa1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 RGPD3A6NKT7 1758 aaPredicted RBP1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 SIPA1L3O60292 1781 aaPredicted RBP1.13□□□□□ -2.23
SCARNA3-201ENST00000517097 TRBV6-7A0A0A0MS04 114 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 A6NIN4 97 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 CBLN1P23435 193 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 KRTAP12-1P59990 96 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 S100A10P60903 97 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 PKIAP61925 76 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 RBM3P98179 157 aaKnown RBP1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 NCMAPQ5T1S8 102 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 GDF5OSQ5U4N7 250 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 UNQ6190/PRO20217Q6UXQ8 127 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 KRTAP5-5Q701N2 237 aaPredicted RBP1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 C10orf82Q8WW14 230 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 MRPL35Q9NZE8 188 aaKnown RBP1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 CPSF1Q10570 1443 aaKnown RBP1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 ASCC3Q8N3C0 2202 aaKnown RBP1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 IFT140Q96RY7 1462 aa1.12□□□□□ -2.23
SCARNA3-201ENST00000517097 ARHGAP5Q13017 1502 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 TRAV12-3A0A0B4J271 114 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 PIGBOS1A0A0B4J2F0 54 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 TRBV10-3A0A0K0K1G6 114 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 CCKP06307 115 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 IL9P15248 144 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 KRTAP6-3Q3LI67 103 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 SPATA45Q537H7 98 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 C5orf38Q86SI9 138 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 NDUFA11Q86Y39 141 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 TTC9CQ8N5M4 171 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 AQP10Q96PS8 301 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 RB1CC1Q8TDY2 1594 aa1.11□□□□□ -2.23
SCARNA3-201ENST00000517097 IGKV3D-7A0A0C4DH55 119 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 IGKV3OR2-268A0A0C4DH90 116 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 FAM24AA6NFZ4 105 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 HIGD1CA8MV81 97 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms