RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 A0A1B0GVY2 172 aa13.24□□□□□ -0.29
LMNA-225ENST00000515824 CRYGDP07320 174 aa13.24□□□□□ -0.29
LMNA-225ENST00000515824 SPANXN1Q5VSR9 72 aa13.24□□□□□ -0.29
LMNA-225ENST00000515824 OR2D3Q8NGH3 330 aa13.24□□□□□ -0.29
LMNA-225ENST00000515824 OR10AG1Q8NH19 301 aa13.24□□□□□ -0.29
LMNA-225ENST00000515824 ATP6V0E2Q8NHE4 81 aa13.24□□□□□ -0.29
LMNA-225ENST00000515824 XKRY2A2RUG3 117 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 GAGE12JA6NER3 117 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 TMEM250H0YL14 139 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 P01737 135 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 GAGE1Q13065 139 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 GAGE4Q13068 117 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 GAGE5Q13069 117 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 GAGE13Q4V321 117 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 WFDC10BQ8IUB3 73 aa13.23□□□□□ -0.29
LMNA-225ENST00000515824 K7EP13 123 aa13.22□□□□□ -0.29
LMNA-225ENST00000515824 EVI2AP22794 236 aa13.22□□□□□ -0.29
LMNA-225ENST00000515824 C14orf178Q8N769 122 aaPredicted RBP13.22□□□□□ -0.29
LMNA-225ENST00000515824 EIF5A2Q9GZV4 153 aaKnown RBP13.22□□□□□ -0.29
LMNA-225ENST00000515824 GTSF1LQ9H1H1 148 aa13.22□□□□□ -0.29
LMNA-225ENST00000515824 PKD1P98161 4303 aa13.22□□□□□ -0.29
LMNA-225ENST00000515824 TRAV8-6A0A0B4J262 113 aa13.21□□□□□ -0.29
LMNA-225ENST00000515824 TNP2Q05952 138 aa13.21□□□□□ -0.29
LMNA-225ENST00000515824 MUC21A0A0G2JKD1 596 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 MUC21A0A140T8X8 626 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 DNAH10OSP0CZ25 163 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 GZMBP10144 247 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 SSTP61278 116 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 OR10J3Q5JRS4 329 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 TOR2AQ5JU69 321 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 LELP1Q5T871 98 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 FER1L6-AS1Q8NA97 138 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 OCC1Q8TAD7 63 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 TPPP3Q9BW30 176 aa13.2□□□□□ -0.3
LMNA-225ENST00000515824 IGHV3-38A0A0C4DH36 116 aa13.19□□□□□ -0.3
LMNA-225ENST00000515824 LINC00315P59091 139 aa13.19□□□□□ -0.3
LMNA-225ENST00000515824 NUDT10Q8NFP7 164 aa13.19□□□□□ -0.3
LMNA-225ENST00000515824 NUDT11Q96G61 164 aa13.19□□□□□ -0.3
LMNA-225ENST00000515824 FAM210AQ96ND0 272 aa13.19□□□□□ -0.3
LMNA-225ENST00000515824 DYNC1H1Q14204 4646 aaKnown RBP13.19□□□□□ -0.3
LMNA-225ENST00000515824 DNAH11Q96DT5 4516 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 TRBV10-1A0A0K0K1A3 114 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 NDUFS6O75380 124 aaKnown RBP13.18□□□□□ -0.3
LMNA-225ENST00000515824 IGLC6P0CF74 106 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 SMIM17P0DL12 118 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 LINC00694P0DN24 101 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 CEBPGP53567 150 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 RAB4BP61018 213 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 Q9UF83 564 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 PKHD1P08F94 4074 aa13.18□□□□□ -0.3
LMNA-225ENST00000515824 F2Z2F3 143 aa13.17□□□□□ -0.3
LMNA-225ENST00000515824 CACNG7P62955 275 aa13.17□□□□□ -0.3
LMNA-225ENST00000515824 C10orf126Q8N4M7 172 aa13.17□□□□□ -0.3
LMNA-225ENST00000515824 K7EN84 100 aa13.16□□□□□ -0.3
LMNA-225ENST00000515824 RPL36AP83881 106 aaKnown RBP13.16□□□□□ -0.3
LMNA-225ENST00000515824 ZNF56Q15929 161 aa13.16□□□□□ -0.3
LMNA-225ENST00000515824 TEX261Q6UWH6 196 aa13.16□□□□□ -0.3
LMNA-225ENST00000515824 NFE4Q86UQ8 179 aa13.16□□□□□ -0.3
LMNA-225ENST00000515824 RPL36ALQ969Q0 106 aaKnown RBP13.16□□□□□ -0.3
LMNA-225ENST00000515824 AP1S3Q96PC3 154 aa13.16□□□□□ -0.3
LMNA-225ENST00000515824 A0A087WWC5 75 aa13.15□□□□□ -0.3
LMNA-225ENST00000515824 F5H697 171 aa13.15□□□□□ -0.3
LMNA-225ENST00000515824 LINC01556Q5JQF7 62 aa13.15□□□□□ -0.3
LMNA-225ENST00000515824 RNASE7Q9H1E1 156 aaKnown RBP13.15□□□□□ -0.3
LMNA-225ENST00000515824 RPP21Q9H633 154 aaKnown RBP13.14□□□□□ -0.31
LMNA-225ENST00000515824 MSRB1Q9NZV6 116 aa13.14□□□□□ -0.31
LMNA-225ENST00000515824 TNFRSF18Q9Y5U5 241 aa13.14□□□□□ -0.31
LMNA-225ENST00000515824 TRBV7-3A0A075B6L6 115 aa13.13□□□□□ -0.31
LMNA-225ENST00000515824 LYZL1Q6UWQ5 148 aa13.13□□□□□ -0.31
LMNA-225ENST00000515824 SMIM7Q9BQ49 75 aa13.13□□□□□ -0.31
LMNA-225ENST00000515824 SRP19P09132 144 aaKnown RBP13.12□□□□□ -0.31
LMNA-225ENST00000515824 WDR73Q6P4I2 378 aa13.12□□□□□ -0.31
LMNA-225ENST00000515824 Q6ZRN7 208 aaPredicted RBP13.12□□□□□ -0.31
LMNA-225ENST00000515824 OR10G8Q8NGN5 311 aa13.12□□□□□ -0.31
LMNA-225ENST00000515824 KIF25-AS1Q9Y6Z4 181 aa13.12□□□□□ -0.31
LMNA-225ENST00000515824 ZNF727A8MUV8 499 aa13.11□□□□□ -0.31
LMNA-225ENST00000515824 GATCO43716 136 aaKnown RBP13.11□□□□□ -0.31
LMNA-225ENST00000515824 UBE2D3P61077 147 aa13.11□□□□□ -0.31
LMNA-225ENST00000515824 UBE2D2P62837 147 aa13.11□□□□□ -0.31
LMNA-225ENST00000515824 IGHV3-30P01768 117 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 IGHV3-33P01772 117 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 TRGC1P0CF51 173 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 IGHV3-30-5P0DP03 117 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 NTF3P20783 257 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 ERVFC1-1P60608 527 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 FAM231DQ6ZW35 169 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.1□□□□□ -0.31
LMNA-225ENST00000515824 NEXN-AS1Q8NBZ9 246 aa13.1□□□□□ -0.31
LMNA-225ENST00000515824 IBA57-AS1B1ANH7 110 aa13.09□□□□□ -0.31
LMNA-225ENST00000515824 CTRLP40313 264 aa13.09□□□□□ -0.31
LMNA-225ENST00000515824 A8MWL6 223 aa13.08□□□□□ -0.32
LMNA-225ENST00000515824 MGPP08493 103 aa13.08□□□□□ -0.32
LMNA-225ENST00000515824 TWIST1Q15672 202 aa13.08□□□□□ -0.32
LMNA-225ENST00000515824 CNFNQ9BYD5 112 aa13.08□□□□□ -0.32
LMNA-225ENST00000515824 H7C1H1 209 aa13.07□□□□□ -0.32
LMNA-225ENST00000515824 PEA15Q15121 130 aa13.07□□□□□ -0.32
LMNA-225ENST00000515824 FAM74A3Q4VXF1 159 aa13.07□□□□□ -0.32
LMNA-225ENST00000515824 LINC01551Q86U37 167 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms