RNA–Protein interactions for RNA: ENST00000515675.1

AFP-207, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 317 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-207ENST00000515675 TET1Q8NFU7 2136 aa1.16□□□□□ -2.22
AFP-207ENST00000515675 PLXNA1Q9UIW2 1896 aa1.16□□□□□ -2.22
AFP-207ENST00000515675 VPS8Q8N3P4 1428 aa1.15□□□□□ -2.22
AFP-207ENST00000515675 ESPL1Q14674 2120 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 INE1O15225 51 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 NDUFB6O95139 128 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 PIPP12273 146 aaPredicted RBP1.15□□□□□ -2.23
AFP-207ENST00000515675 RBP2P50120 134 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 UBE2G1P62253 170 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 RBM3P98179 157 aaKnown RBP1.15□□□□□ -2.23
AFP-207ENST00000515675 Q6AWC8 147 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 RPL7L1Q6DKI1 246 aaKnown RBP1.15□□□□□ -2.23
AFP-207ENST00000515675 SLC48A1Q6P1K1 146 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 LINC00299Q6ZSB3 139 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 SPTSSBQ8NFR3 76 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 MRPL35Q9NZE8 188 aaKnown RBP1.15□□□□□ -2.23
AFP-207ENST00000515675 KTN1Q86UP2 1357 aaKnown RBP1.15□□□□□ -2.23
AFP-207ENST00000515675 PHIPQ8WWQ0 1821 aa1.15□□□□□ -2.23
AFP-207ENST00000515675 LOC285556D6RIA3 1793 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 TET3O43151 1660 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 IGKV3D-7A0A0C4DH55 119 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 IGKV3OR2-268A0A0C4DH90 116 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 TRBV10-1A0A0K0K1A3 114 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 CXorf51AA0A1B0GTR3 108 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 OOSP1A8MZH6 123 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 PRB1P04280 392 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 PDE6GP18545 87 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 Q56UQ5 140 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 GDF5OSQ5U4N7 250 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 GTF2H5Q6ZYL4 71 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 IFI27L1Q96BM0 104 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 PPP3R2Q96LZ3 170 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 ATG5Q9H1Y0 275 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 MED9Q9NWA0 146 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 SHROOM2Q13796 1616 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 ZFYVE16Q7Z3T8 1539 aa1.14□□□□□ -2.23
AFP-207ENST00000515675 ADGRB2O60241 1585 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 SPHKAPQ2M3C7 1700 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 ANKRD26Q9UPS8 1709 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 LOC110117498A0A087WWA1 95 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 A0A0J9YY99 117 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 LOC101927531A0A1B0GV80 90 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 APOC4-APOC2K7ER74 178 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 M0R2N4 97 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 APOC2P02655 101 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 NPC2P61916 151 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 UNQ6190/PRO20217Q6UXQ8 127 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 Q8N8P6 123 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 PPDPFLQ8WWR9 84 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 DMAC1Q96GE9 116 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 TMEM141Q96I45 108 aa1.13□□□□□ -2.23
AFP-207ENST00000515675 SNRNP200O75643 2136 aaKnown RBP1.13□□□□□ -2.23
AFP-207ENST00000515675 PSME4Q14997 1843 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 IGLV3-32A0A0A0MS00 114 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 TRAV12-3A0A0B4J271 114 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 IGKV2-29A2NJV5 120 aaPredicted RBP1.12□□□□□ -2.23
AFP-207ENST00000515675 TNFP01375 233 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 GYPBP06028 91 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 CCKP06307 115 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 SPATA45Q537H7 98 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 SBSPONQ8IVN8 264 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 SVBPQ8N300 66 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 MRPL57Q9BQC6 102 aaKnown RBP1.12□□□□□ -2.23
AFP-207ENST00000515675 C22orf24Q9Y442 160 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 IER3IP1Q9Y5U9 82 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 TNS1Q9HBL0 1735 aaKnown RBP1.12□□□□□ -2.23
AFP-207ENST00000515675 SPTBP11277 2137 aa1.12□□□□□ -2.23
AFP-207ENST00000515675 IGKV2-40A0A087WW87 121 aaPredicted RBP1.11□□□□□ -2.23
AFP-207ENST00000515675 TRAV2A0A0B4J234 112 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 NBDYA0A0U1RRE5 68 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 A6NIN4 97 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 IFNA17P01571 189 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 IGKV2D-40P01614 121 aaPredicted RBP1.11□□□□□ -2.23
AFP-207ENST00000515675 S100A8P05109 93 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 FXYD4P59646 89 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 S100A10P60903 97 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 HSD52Q0P140 79 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 C9orf116Q5BN46 136 aaPredicted RBP1.11□□□□□ -2.23
AFP-207ENST00000515675 NCMAPQ5T1S8 102 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 Q86TA4 180 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 RPRMQ9NS64 109 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 CHD1O14646 1710 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 TANC1Q9C0D5 1861 aa1.11□□□□□ -2.23
AFP-207ENST00000515675 TOPAZ1Q8N9V7 1692 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 PRDM2Q13029 1718 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 DAPK1P53355 1430 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 CPSF1Q10570 1443 aaKnown RBP1.1□□□□□ -2.23
AFP-207ENST00000515675 CASKIN1Q8WXD9 1431 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 TMEM218A2RU14 115 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 FXYD1O00168 92 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 IGHV3-30P01768 117 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 SPINK8P0C7L1 97 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 IGHV3-30-5P0DP03 117 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 CBLN1P23435 193 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 FXYD3Q14802 87 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 CYP2G1PQ6ZSU1 146 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 SCRIBQ14160 1630 aa1.1□□□□□ -2.23
AFP-207ENST00000515675 TRAV30A0A087WSZ9 112 aa1.09□□□□□ -2.23
AFP-207ENST00000515675 TRBV10-3A0A0K0K1G6 114 aa1.09□□□□□ -2.23
AFP-207ENST00000515675 HIGD1CA8MV81 97 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms