RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ISOC2Q96AB3 205 aa4.98□□□□□ -1.61
SMAD1-213ENST00000514778 SFRP2Q96HF1 295 aa4.98□□□□□ -1.61
SMAD1-213ENST00000514778 APLNQ9ULZ1 77 aa4.98□□□□□ -1.61
SMAD1-213ENST00000514778 HHLA3Q9XRX5 114 aa4.98□□□□□ -1.61
SMAD1-213ENST00000514778 TRGV4A0A0C4DH28 118 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 TRBV6-4A0A1B0GX49 114 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 TMEM218A2RU14 115 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 PPP1R2P9O14990 202 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 HTN3P15516 51 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 CTRLP40313 264 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 CRYBA4P53673 196 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 FAM3BP58499 235 aaPredicted RBP4.97□□□□□ -1.61
SMAD1-213ENST00000514778 RPL19P84098 196 aaKnown RBP4.97□□□□□ -1.61
SMAD1-213ENST00000514778 FHL2Q14192 279 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 RNF212Q495C1 297 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 SPANXN1Q5VSR9 72 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 LGALS9CQ6DKI2 356 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 TMEM88Q6PEY1 159 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 SH2D6Q7Z4S9 175 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 POM121L12Q8N7R1 296 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 TSKUQ8WUA8 353 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 SEC11CQ9BY50 192 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 KRTAP4-5Q9BYR2 181 aa4.97□□□□□ -1.61
SMAD1-213ENST00000514778 RNASE7Q9H1E1 156 aaKnown RBP4.97□□□□□ -1.61
SMAD1-213ENST00000514778 TRAV26-1A0A087WT03 109 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 M0R381 172 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 P0DMU3 169 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 FAM231AP0DMU4 169 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 FAM231CP0DMU5 169 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 GATA1P15976 413 aaPredicted RBP4.96□□□□□ -1.62
SMAD1-213ENST00000514778 ADIRFQ15847 76 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 UFSP1Q6NVU6 142 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 COMMD7Q86VX2 200 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 OR10G8Q8NGN5 311 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 FRZBQ92765 325 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 BORCS7Q96B45 105 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 ZNF479Q96JC4 524 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 AP1S3Q96PC3 154 aa4.96□□□□□ -1.62
SMAD1-213ENST00000514778 TRBV10-1A0A0K0K1A3 114 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 A0A1B0GW15 77 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 IGHV3-53P01767 116 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 MT-ND4LP03901 98 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 CRYGDP07320 174 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 TRGC1P0CF51 173 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 SMIM17P0DL12 118 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 RAB4BP61018 213 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 RHOHQ15669 191 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 MRPL23Q16540 153 aaKnown RBP4.95□□□□□ -1.62
SMAD1-213ENST00000514778 NDUFA5Q16718 116 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 C10orf91Q5T1B1 145 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 LYZL1Q6UWQ5 148 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 OR10AG1Q8NH19 301 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 ANAPC16Q96DE5 110 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 VSIG2Q96IQ7 327 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 PRADC1Q9BSG0 188 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 NAT8BQ9UHF3 227 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 ICOSQ9Y6W8 199 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 V9GYV3 84 aa4.95□□□□□ -1.62
SMAD1-213ENST00000514778 LCE6AA0A183 80 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 SMIM27A0A1W2PRY6 76 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 F8W036 122 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 H7C1H1 209 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 GZMBP10144 247 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 NTF3P20783 257 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 CCL18P55774 89 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 TIRAPP58753 221 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 SMIM15Q7Z3B0 74 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 SLC25A29Q8N8R3 303 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 GTSF1Q8WW33 167 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 LINC00476Q8WZB0 136 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 IMMP2LQ96T52 175 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 TPPP3Q9BW30 176 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 KRTAP9-3Q9BYQ3 159 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 TMEM242Q9NWH2 141 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 KIF25-AS1Q9Y6Z4 181 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 CSMD3Q7Z407 3707 aa4.94□□□□□ -1.62
SMAD1-213ENST00000514778 DNAH7Q8WXX0 4024 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 A0A096LPF7 62 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 A0A1B0GUT8 65 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 HIGD1CA8MV81 97 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 NUDT3O95989 172 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 S100A8P05109 93 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 RIGQ13278 110 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 TWIST1Q15672 202 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 CTDSP1Q9GZU7 261 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 DPH3P1Q9H4G8 78 aa4.93□□□□□ -1.62
SMAD1-213ENST00000514778 CARHSP1Q9Y2V2 147 aaKnown RBP4.93□□□□□ -1.62
SMAD1-213ENST00000514778 A0A0J9YY99 117 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 K7EP13 123 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 K7EQD1 137 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 GYPEP15421 78 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 ADCYAP1P18509 176 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 SRIP30626 198 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 LINC00315P59091 139 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 FAM74A4Q5TZK3 123 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 NEGR1Q7Z3B1 354 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 ATP5L2Q7Z4Y8 100 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 C14orf178Q8N769 122 aaPredicted RBP4.92□□□□□ -1.62
SMAD1-213ENST00000514778 NUP35Q8NFH5 326 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 PGLYRP4Q96LB8 373 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms