RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 FOXA3P55318 350 aaPredicted RBP14.23□□□□□ -0.13
USP53-208ENST00000514305 ZNF575Q86XF7 245 aa14.23□□□□□ -0.13
USP53-208ENST00000514305 V9GYV3 84 aa14.23□□□□□ -0.13
USP53-208ENST00000514305 TRGV4A0A0C4DH28 118 aa14.22□□□□□ -0.13
USP53-208ENST00000514305 RHODO00212 210 aa14.22□□□□□ -0.13
USP53-208ENST00000514305 SMIM17P0DL12 118 aa14.22□□□□□ -0.13
USP53-208ENST00000514305 LYZL1Q6UWQ5 148 aa14.22□□□□□ -0.13
USP53-208ENST00000514305 SMIM15Q7Z3B0 74 aa14.22□□□□□ -0.13
USP53-208ENST00000514305 RS1O15537 224 aa14.21□□□□□ -0.13
USP53-208ENST00000514305 TRGC1P0CF51 173 aa14.21□□□□□ -0.13
USP53-208ENST00000514305 C10orf91Q5T1B1 145 aa14.21□□□□□ -0.13
USP53-208ENST00000514305 NAT8BQ9UHF3 227 aa14.21□□□□□ -0.13
USP53-208ENST00000514305 CARHSP1Q9Y2V2 147 aaKnown RBP14.21□□□□□ -0.13
USP53-208ENST00000514305 ADCYAP1P18509 176 aa14.2□□□□□ -0.14
USP53-208ENST00000514305 CTRLP40313 264 aa14.2□□□□□ -0.14
USP53-208ENST00000514305 ZFP2Q6ZN57 461 aa14.2□□□□□ -0.14
USP53-208ENST00000514305 OR10AG1Q8NH19 301 aa14.2□□□□□ -0.14
USP53-208ENST00000514305 AP1S3Q96PC3 154 aa14.2□□□□□ -0.14
USP53-208ENST00000514305 CTDSP1Q9GZU7 261 aa14.2□□□□□ -0.14
USP53-208ENST00000514305 IGHV4-4A0A075B6R2 117 aa14.19□□□□□ -0.14
USP53-208ENST00000514305 NXPH4O95158 308 aa14.19□□□□□ -0.14
USP53-208ENST00000514305 RNF212Q495C1 297 aa14.19□□□□□ -0.14
USP53-208ENST00000514305 CFAP126Q5VTH2 177 aa14.19□□□□□ -0.14
USP53-208ENST00000514305 HIGD1CA8MV81 97 aa14.18□□□□□ -0.14
USP53-208ENST00000514305 IGHV3-53P01767 116 aa14.18□□□□□ -0.14
USP53-208ENST00000514305 RIGQ13278 110 aa14.18□□□□□ -0.14
USP53-208ENST00000514305 SVBPQ8N300 66 aa14.18□□□□□ -0.14
USP53-208ENST00000514305 PGLYRP4Q96LB8 373 aa14.18□□□□□ -0.14
USP53-208ENST00000514305 CNFNQ9BYD5 112 aa14.18□□□□□ -0.14
USP53-208ENST00000514305 PRO0255Q9UI72 69 aa14.18□□□□□ -0.14
USP53-208ENST00000514305 APLNQ9ULZ1 77 aa14.18□□□□□ -0.14
USP53-208ENST00000514305 A0A1B0GUT8 65 aa14.17□□□□□ -0.14
USP53-208ENST00000514305 NTF3P20783 257 aa14.17□□□□□ -0.14
USP53-208ENST00000514305 SSTP61278 116 aa14.17□□□□□ -0.14
USP53-208ENST00000514305 TWIST1Q15672 202 aa14.17□□□□□ -0.14
USP53-208ENST00000514305 C15orf53Q8NAA6 179 aa14.17□□□□□ -0.14
USP53-208ENST00000514305 GTSF1Q8WW33 167 aa14.17□□□□□ -0.14
USP53-208ENST00000514305 ZNF479Q96JC4 524 aa14.17□□□□□ -0.14
USP53-208ENST00000514305 HHLA3Q9XRX5 114 aa14.17□□□□□ -0.14
USP53-208ENST00000514305 SMIM27A0A1W2PRY6 76 aa14.16□□□□□ -0.14
USP53-208ENST00000514305 H3BNG1 76 aa14.16□□□□□ -0.14
USP53-208ENST00000514305 SNAPINO95295 136 aa14.16□□□□□ -0.14
USP53-208ENST00000514305 RHEBQ15382 184 aa14.16□□□□□ -0.14
USP53-208ENST00000514305 APOC3P02656 99 aa14.15□□□□□ -0.14
USP53-208ENST00000514305 POM121L12Q8N7R1 296 aa14.15□□□□□ -0.14
USP53-208ENST00000514305 MUC21A0A0G2JKD1 596 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 MUC21A0A140T8X8 626 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 A0A1B0GW15 77 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 PAX4O43316 350 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 S100A8P05109 93 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 FHL2Q14192 279 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 FAM74A4Q5TZK3 123 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 KCNIP4Q6PIL6 250 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 SLC7A5P1Q8MH63 180 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 CLRN3Q8NCR9 226 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 IMMP2LQ96T52 175 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 PRADC1Q9BSG0 188 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 TMEM242Q9NWH2 141 aa14.14□□□□□ -0.15
USP53-208ENST00000514305 TRBV6-4A0A1B0GX49 114 aa14.13□□□□□ -0.15
USP53-208ENST00000514305 S100PP25815 95 aa14.13□□□□□ -0.15
USP53-208ENST00000514305 TMEM88Q6PEY1 159 aa14.13□□□□□ -0.15
USP53-208ENST00000514305 NUP35Q8NFH5 326 aa14.13□□□□□ -0.15
USP53-208ENST00000514305 TRAV26-1A0A087WT03 109 aa14.12□□□□□ -0.15
USP53-208ENST00000514305 A0A087WWC5 75 aa14.12□□□□□ -0.15
USP53-208ENST00000514305 GHRHP01286 108 aa14.12□□□□□ -0.15
USP53-208ENST00000514305 HOXA5P20719 270 aa14.12□□□□□ -0.15
USP53-208ENST00000514305 RHOHQ15669 191 aa14.12□□□□□ -0.15
USP53-208ENST00000514305 DPH3P1Q9H4G8 78 aa14.12□□□□□ -0.15
USP53-208ENST00000514305 MUC4Q99102 2169 aa14.12□□□□□ -0.15
USP53-208ENST00000514305 A0A087WWL8 130 aa14.11□□□□□ -0.15
USP53-208ENST00000514305 CRYGDP07320 174 aa14.11□□□□□ -0.15
USP53-208ENST00000514305 GATA1P15976 413 aaPredicted RBP14.11□□□□□ -0.15
USP53-208ENST00000514305 CRYBA4P53673 196 aa14.11□□□□□ -0.15
USP53-208ENST00000514305 RAB4BP61018 213 aa14.11□□□□□ -0.15
USP53-208ENST00000514305 C14orf178Q8N769 122 aaPredicted RBP14.11□□□□□ -0.15
USP53-208ENST00000514305 JPT2Q9H910 190 aa14.11□□□□□ -0.15
USP53-208ENST00000514305 RPS10P5Q9NQ39 176 aa14.11□□□□□ -0.15
USP53-208ENST00000514305 IGHV3-73A0A0B4J1V6 119 aa14.1□□□□□ -0.15
USP53-208ENST00000514305 C7orf77A4D0Y5 90 aa14.1□□□□□ -0.15
USP53-208ENST00000514305 F5H697 171 aa14.1□□□□□ -0.15
USP53-208ENST00000514305 ZNF56Q15929 161 aa14.1□□□□□ -0.15
USP53-208ENST00000514305 SH2D6Q7Z4S9 175 aa14.1□□□□□ -0.15
USP53-208ENST00000514305 H7C1H1 209 aa14.09□□□□□ -0.15
USP53-208ENST00000514305 MRPL23Q16540 153 aaKnown RBP14.09□□□□□ -0.15
USP53-208ENST00000514305 ATP5L2Q7Z4Y8 100 aa14.09□□□□□ -0.15
USP53-208ENST00000514305 SAMD10Q9BYL1 202 aa14.09□□□□□ -0.15
USP53-208ENST00000514305 ICOSQ9Y6W8 199 aa14.09□□□□□ -0.15
USP53-208ENST00000514305 A0A0J9YY99 117 aa14.08□□□□□ -0.16
USP53-208ENST00000514305 K7EQD1 137 aa14.08□□□□□ -0.16
USP53-208ENST00000514305 NUDT3O95989 172 aa14.08□□□□□ -0.16
USP53-208ENST00000514305 UFSP1Q6NVU6 142 aa14.08□□□□□ -0.16
USP53-208ENST00000514305 BTF3L4Q96K17 158 aa14.08□□□□□ -0.16
USP53-208ENST00000514305 MSRB1Q9NZV6 116 aa14.08□□□□□ -0.16
USP53-208ENST00000514305 VPS13DQ5THJ4 4388 aa14.08□□□□□ -0.16
USP53-208ENST00000514305 DNAH6Q9C0G6 4158 aa14.07□□□□□ -0.16
USP53-208ENST00000514305 TRAV9-1A0A075B6T8 112 aa14.07□□□□□ -0.16
USP53-208ENST00000514305 TRBV10-1A0A0K0K1A3 114 aa14.07□□□□□ -0.16
USP53-208ENST00000514305 MGPP08493 103 aa14.07□□□□□ -0.16
USP53-208ENST00000514305 EVI2AP22794 236 aa14.07□□□□□ -0.16
USP53-208ENST00000514305 SLC25A29Q8N8R3 303 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms