RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 GOLT1BQ9Y3E0 138 aa7.21□□□□□ -1.26
TPM3-221ENST00000513769 ANK2Q01484 3957 aa7.21□□□□□ -1.26
TPM3-221ENST00000513769 K7EMI3 77 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 M0R2P5 195 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 SMIM17P0DL12 118 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 EVI2AP22794 236 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 LGALS9BQ3B8N2 356 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 NIT1Q86X76 327 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 AMN1Q8IY45 258 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 CSNK1G2-AS1Q8NCQ2 148 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 RNF185Q96GF1 192 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 GSN-AS1Q9NRJ2 163 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 MDFICQ9P1T7 246 aa7.2□□□□□ -1.26
TPM3-221ENST00000513769 WNK1Q9H4A3 2382 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 A8MWV9 139 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 A8MZ25 164 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 M0R381 172 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 ZNF415Q09FC8 603 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 C1orf158Q8N1D5 194 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 PRSS3P2Q8NHM4 247 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 RASL10AQ92737 203 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 PRELID3AQ96N28 172 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 AP1S3Q96PC3 154 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 C20orf78Q9BR46 151 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 TMEM208Q9BTX3 173 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 XCL2Q9UBD3 114 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 KIF25-AS1Q9Y6Z4 181 aa7.19□□□□□ -1.26
TPM3-221ENST00000513769 AGRNO00468 2067 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 LINC01546A6NGU7 62 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 GIG44P09565 113 aaPredicted RBP7.18□□□□□ -1.26
TPM3-221ENST00000513769 IGLL1P15814 213 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 G0S2P27469 103 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 FXYD7P58549 80 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 SSTP61278 116 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 EGFEM1PQ0D2K5 195 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 DAZ2Q13117 558 aaKnown RBP7.18□□□□□ -1.26
TPM3-221ENST00000513769 ZNF876PQ49A33 203 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 ZNF705AQ6ZN79 300 aaPredicted RBP7.18□□□□□ -1.26
TPM3-221ENST00000513769 EDA2RQ9HAV5 297 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 NXT2Q9NPJ8 142 aaKnown RBP7.18□□□□□ -1.26
TPM3-221ENST00000513769 TENM1Q9UKZ4 2725 aa7.18□□□□□ -1.26
TPM3-221ENST00000513769 MEGF8Q7Z7M0 2845 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 MUC21A0A0G2JKD1 596 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 MUC21A0A140T8X8 626 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 LINC01549A6NIU2 74 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 D6R8Y8 96 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 HSBP1O75506 76 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 SERF1AO75920 110 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 RBMY1A1P0DJD3 496 aaKnown RBP7.17□□□□□ -1.26
TPM3-221ENST00000513769 RBMY1CP0DJD4 496 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 APOC4P55056 127 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 RPL32P62910 135 aaKnown RBP7.17□□□□□ -1.26
TPM3-221ENST00000513769 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
TPM3-221ENST00000513769 C14orf178Q8N769 122 aaPredicted RBP7.17□□□□□ -1.26
TPM3-221ENST00000513769 TMEM263Q8WUH6 116 aaKnown RBP7.17□□□□□ -1.26
TPM3-221ENST00000513769 RCHY1Q96PM5 261 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 HIST1H2BLQ99880 126 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 OVOL2Q9BRP0 275 aa7.17□□□□□ -1.26
TPM3-221ENST00000513769 MGAM2Q2M2H8 2515 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 H7C1H1 209 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 NUPR1O60356 82 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 TNFRSF6BO95407 300 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 CRYGDP07320 174 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 LINC00315P59091 139 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 ZFP2Q6ZN57 461 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 C11orf72Q8NBR9 251 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 C16orf74Q96GX8 76 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 KRTAP4-11Q9BYQ6 195 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 MAP1LC3AQ9H492 121 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
TPM3-221ENST00000513769 TIMM8BQ9Y5J9 83 aaPredicted RBP7.16□□□□□ -1.26
TPM3-221ENST00000513769 TRBV6-5A0A0K0K1A5 114 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 IFITM10A6NMD0 228 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 RHODO00212 210 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 TCAPO15273 167 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 FABP4P15090 132 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 HTN1P15515 57 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 DEFA6Q01524 100 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 RRN3P1Q2M238 152 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 RNASE8Q8TDE3 154 aaKnown RBP7.15□□□□□ -1.26
TPM3-221ENST00000513769 SAMD10Q9BYL1 202 aa7.15□□□□□ -1.26
TPM3-221ENST00000513769 SPRY2O43597 315 aa7.14□□□□□ -1.27
TPM3-221ENST00000513769 RPL35AP18077 110 aaKnown RBP7.14□□□□□ -1.27
TPM3-221ENST00000513769 AKR1D1P51857 326 aa7.14□□□□□ -1.27
TPM3-221ENST00000513769 Q6ZWC4 215 aa7.14□□□□□ -1.27
TPM3-221ENST00000513769 FA2HQ7L5A8 372 aa7.14□□□□□ -1.27
TPM3-221ENST00000513769 Q8N8P6 123 aa7.14□□□□□ -1.27
TPM3-221ENST00000513769 NRACQ8N912 160 aa7.14□□□□□ -1.27
TPM3-221ENST00000513769 OR10D4PQ8NGN7 298 aa7.14□□□□□ -1.27
TPM3-221ENST00000513769 MUC4Q99102 2169 aa7.13□□□□□ -1.27
TPM3-221ENST00000513769 VCYO14598 125 aa7.13□□□□□ -1.27
TPM3-221ENST00000513769 RS1O15537 224 aa7.13□□□□□ -1.27
TPM3-221ENST00000513769 SMIM6P0DI80 62 aa7.13□□□□□ -1.27
TPM3-221ENST00000513769 AZU1P20160 251 aa7.13□□□□□ -1.27
TPM3-221ENST00000513769 IFI27P40305 119 aaPredicted RBP7.13□□□□□ -1.27
TPM3-221ENST00000513769 AMTP48728 403 aa7.13□□□□□ -1.27
TPM3-221ENST00000513769 JOSD1Q15040 202 aaPredicted RBP7.13□□□□□ -1.27
TPM3-221ENST00000513769 IL17DQ8TAD2 202 aa7.13□□□□□ -1.27
TPM3-221ENST00000513769 URB1-AS1Q96HZ7 61 aa7.13□□□□□ -1.27
TPM3-221ENST00000513769 DNAJC30Q96LL9 226 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms