RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 LINC01620Q4KN68 170 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 DAND5Q8N907 189 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 LRP4O75096 1905 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 TCL1BO95988 128 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 TM2D2Q9BX73 214 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 PTPRQQ9UMZ3 2332 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 GAS8-AS1O95177 125 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 GNLYP22749 145 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 S100A7L2Q5SY68 101 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 C9orf47Q6ZRZ4 202 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 C2CD3Q4AC94 2353 aa5.96□□□□□ -1.46
CLCN3-209ENST00000513761 WNK1Q9H4A3 2382 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 PF4P02776 101 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 NDUFA11Q86Y39 141 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 RHOHQ15669 191 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 TCTEX1D4Q5JR98 221 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 C16orf54Q6UWD8 224 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 Q71RC1 249 aaPredicted RBP5.95□□□□□ -1.46
CLCN3-209ENST00000513761 RNF183Q96D59 192 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 PIP4P1Q86T03 277 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 INAFM2P0DMQ5 153 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 Q6ZUT4 128 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 RNF185Q96GF1 192 aa5.95□□□□□ -1.46
CLCN3-209ENST00000513761 Q9H8V8 135 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 LAMTOR3Q9UHA4 124 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 CSPG4Q6UVK1 2322 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 RHODO00212 210 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 FAM208BQ5VWN6 2430 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 K7ENP7 123 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 ICOSQ9Y6W8 199 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 IGF1P05019 195 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 MSMBP08118 114 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 U3KQK5 164 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 BLCAPP62952 87 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 UNQ9165/PRO28630Q6UXU0 137 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 C5orf42Q9H799 3197 aa5.94□□□□□ -1.46
CLCN3-209ENST00000513761 CLEC2BQ92478 149 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 TRBV12-3P01733 135 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 ZFP36P26651 326 aaKnown RBP5.93□□□□□ -1.46
CLCN3-209ENST00000513761 INSL3P51460 131 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 AJUBAQ96IF1 538 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 CRYGBP07316 175 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 TINCRA0A1B0GVN0 87 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 IGHG4P01861 327 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 LINC01548A6NM66 108 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 BAALC-AS2P0C853 105 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 ATP6V0E2Q8NHE4 81 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 SPANXA1Q9NS26 97 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 Q8N1Y9 231 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 OVOL2Q9BRP0 275 aa5.93□□□□□ -1.46
CLCN3-209ENST00000513761 TNRC6BQ9UPQ9 1833 aaKnown RBP5.93□□□□□ -1.46
CLCN3-209ENST00000513761 SOCS3O14543 225 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 DEFB130BP0DP73 79 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 DEFB130AP0DP74 79 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 CITED1Q99966 193 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 SORL1Q92673 2214 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 CEP192Q8TEP8 1941 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 NXPH4O95158 308 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 SRSF2Q01130 221 aaKnown RBP5.92□□□□□ -1.46
CLCN3-209ENST00000513761 ARHGAP32A7KAX9 2087 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 HOXD3P31249 432 aaPredicted RBP5.92□□□□□ -1.46
CLCN3-209ENST00000513761 SMAD5-AS1Q9Y6J3 95 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 NEXN-AS1Q8NBZ9 246 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 CCDC140Q96MF4 163 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 TIMM17AQ99595 171 aa5.92□□□□□ -1.46
CLCN3-209ENST00000513761 FAM236AA0A1B0GUQ0 79 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 FAM236BA0A1B0GV22 79 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 C5orf56Q8N8D9 126 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 MDFICQ9P1T7 246 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 HERVK_113P63121 156 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 NSUN5P1Q3KNT7 163 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 CEMP1Q6PRD7 247 aaPredicted RBP5.91□□□□□ -1.46
CLCN3-209ENST00000513761 UFSP1Q6NVU6 142 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 PIFOQ8TCI5 191 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 TRBV10-2A0A0K0K1G8 114 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 IGHV4-38-2P0DP08 117 aa5.91□□□□□ -1.46
CLCN3-209ENST00000513761 DEFB136Q30KP8 78 aa5.9□□□□□ -1.46
CLCN3-209ENST00000513761 TEX49A0A1B0GTD5 131 aa5.9□□□□□ -1.46
CLCN3-209ENST00000513761 DNAJC30Q96LL9 226 aa5.9□□□□□ -1.46
CLCN3-209ENST00000513761 TMEM243Q9BU79 118 aa5.9□□□□□ -1.46
CLCN3-209ENST00000513761 U3KQE9 123 aa5.9□□□□□ -1.47
CLCN3-209ENST00000513761 ACACBO00763 2458 aa5.9□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV4-59P01825 116 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 PTPN13Q12923 2485 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 C11orf21Q9P2W6 132 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 DSCAMO60469 2012 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 TRAV13-2A0A0B4J235 113 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 A0A0J9YY99 117 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV3-30-3P0DP02 117 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 LGALS9O00182 355 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 TRACP01848 142 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 C20orf173Q96LM9 149 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 LINC01619G3V211 115 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 APRG1Q8IVJ8 170 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 LINC01356Q8N9X3 169 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 RNF223E7ERA6 249 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 CLUHP3Q96NS8 147 aa5.89□□□□□ -1.47
CLCN3-209ENST00000513761 H3BUA1 57 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 P0DMU3 169 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 FAM231AP0DMU4 169 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms