RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SMUG1Q53HV7 270 aa6.89□□□□□ -1.31
DDX41-216ENST00000513562 FAM74A4Q5TZK3 123 aa6.89□□□□□ -1.31
DDX41-216ENST00000513562 SDHCQ99643 169 aaPredicted RBP6.89□□□□□ -1.31
DDX41-216ENST00000513562 PRR34Q9NV39 138 aa6.89□□□□□ -1.31
DDX41-216ENST00000513562 PSG8Q9UQ74 426 aa6.89□□□□□ -1.31
DDX41-216ENST00000513562 IGHV3-64A0A075B6Q5 118 aa6.88□□□□□ -1.31
DDX41-216ENST00000513562 TCRAP04437 139 aa6.88□□□□□ -1.31
DDX41-216ENST00000513562 DEFA1P59665 94 aa6.88□□□□□ -1.31
DDX41-216ENST00000513562 DEFA3P59666 94 aa6.88□□□□□ -1.31
DDX41-216ENST00000513562 RPL36AP83881 106 aaKnown RBP6.88□□□□□ -1.31
DDX41-216ENST00000513562 PQLC2Q6ZP29 291 aa6.88□□□□□ -1.31
DDX41-216ENST00000513562 RPL36ALQ969Q0 106 aaKnown RBP6.88□□□□□ -1.31
DDX41-216ENST00000513562 DPH3Q96FX2 82 aa6.88□□□□□ -1.31
DDX41-216ENST00000513562 IL36BQ9NZH7 164 aa6.88□□□□□ -1.31
DDX41-216ENST00000513562 TRBV7-3A0A075B6L6 115 aa6.87□□□□□ -1.31
DDX41-216ENST00000513562 C5orf17Q8NAS9 161 aa6.87□□□□□ -1.31
DDX41-216ENST00000513562 TRAV6A0A075B6T7 132 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 A0A087WWL8 130 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 hDV102S1A0JD36 115 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 H3BVH4 76 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 K7EQM0 130 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 SLPIP03973 132 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 PKIAP61925 76 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 FLI1Q01543 452 aaPredicted RBP6.86□□□□□ -1.31
DDX41-216ENST00000513562 MZT2BQ6NZ67 158 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 REG3GQ6UW15 175 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 OR10G8Q8NGN5 311 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 SFRP2Q96HF1 295 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 FAT4Q6V0I7 4981 aa6.86□□□□□ -1.31
DDX41-216ENST00000513562 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.85□□□□□ -1.31
DDX41-216ENST00000513562 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 PLA2G10O15496 165 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 LYRM1O43325 122 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 PTTG1O95997 202 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 TCRBP04435 133 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 SAPCD1Q5SSQ6 148 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 CLPSL2Q6UWE3 100 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 SPINK6Q6UWN8 80 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 PRNTQ86SH4 94 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 LINC00269Q8N2A0 174 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 OR11H4Q8NGC9 324 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 ENKURQ8TC29 256 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 CHCHD5Q9BSY4 110 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 NUDT15Q9NV35 164 aa6.85□□□□□ -1.31
DDX41-216ENST00000513562 H0YIZ8 118 aa6.84□□□□□ -1.31
DDX41-216ENST00000513562 ARMS2P0C7Q2 107 aa6.84□□□□□ -1.31
DDX41-216ENST00000513562 RBX1P62877 108 aa6.84□□□□□ -1.31
DDX41-216ENST00000513562 DNLZQ5SXM8 178 aa6.84□□□□□ -1.31
DDX41-216ENST00000513562 GTSF1Q8WW33 167 aa6.84□□□□□ -1.31
DDX41-216ENST00000513562 FAM240BA0A1B0GVZ2 78 aa6.83□□□□□ -1.32
DDX41-216ENST00000513562 A0A1W2PPV4 95 aa6.83□□□□□ -1.32
DDX41-216ENST00000513562 FABP5P3A8MUU1 101 aa6.83□□□□□ -1.32
DDX41-216ENST00000513562 B4DEV8 164 aa6.83□□□□□ -1.32
DDX41-216ENST00000513562 HMGB3O15347 200 aaKnown RBP6.83□□□□□ -1.32
DDX41-216ENST00000513562 LRRC37A5PQ49AS3 106 aa6.83□□□□□ -1.32
DDX41-216ENST00000513562 SUN5Q8TC36 379 aa6.83□□□□□ -1.32
DDX41-216ENST00000513562 AP5S1Q9NUS5 200 aa6.83□□□□□ -1.32
DDX41-216ENST00000513562 EPDR1Q9UM22 224 aa6.83□□□□□ -1.32
DDX41-216ENST00000513562 KRBOX1C9JBD0 128 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 ARL14EPLP0DKL9 152 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 RAB2AP61019 212 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 IFITM3Q01628 133 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 RGS21Q2M5E4 152 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 NTM-AS1Q6ZSK4 140 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 NEXN-AS1Q8NBZ9 246 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 SCGB1C1Q8TD33 95 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 PHLDA3Q9Y5J5 127 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 ARL2-SNX15V9GYD0 113 aa6.82□□□□□ -1.32
DDX41-216ENST00000513562 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
DDX41-216ENST00000513562 M0R381 172 aa6.81□□□□□ -1.32
DDX41-216ENST00000513562 H2AFB2P0C5Z0 115 aa6.81□□□□□ -1.32
DDX41-216ENST00000513562 STAG3L2P0CL84 134 aa6.81□□□□□ -1.32
DDX41-216ENST00000513562 STAG3L3P0CL85 134 aa6.81□□□□□ -1.32
DDX41-216ENST00000513562 SRSF9Q13242 221 aaKnown RBP eCLIP6.81□□□□□ -1.32
DDX41-216ENST00000513562 PRR27Q6MZM9 219 aa6.81□□□□□ -1.32
DDX41-216ENST00000513562 HSPB11Q9Y547 144 aa6.81□□□□□ -1.32
DDX41-216ENST00000513562 MUC21A0A0G2JKD1 596 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 GRIFINA4D1Z8 144 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 M0R036 132 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 SIX6O95475 246 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 RAB4BP61018 213 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 SUMO1P63165 101 aaKnown RBP6.8□□□□□ -1.32
DDX41-216ENST00000513562 COX6A2Q02221 97 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 REG3AQ06141 175 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 GAGE6Q13070 117 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 MAJINQ3KP22 176 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 TMEM97Q5BJF2 176 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 ZFP82Q8N141 532 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 SMIM3Q9BZL3 60 aa6.8□□□□□ -1.32
DDX41-216ENST00000513562 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
DDX41-216ENST00000513562 TRAV34A0A0B4J273 112 aa6.79□□□□□ -1.32
DDX41-216ENST00000513562 NDUFS6O75380 124 aaKnown RBP6.79□□□□□ -1.32
DDX41-216ENST00000513562 P01737 135 aa6.79□□□□□ -1.32
DDX41-216ENST00000513562 TPT1P13693 172 aaKnown RBP6.79□□□□□ -1.32
DDX41-216ENST00000513562 GCHFRP30047 84 aa6.79□□□□□ -1.32
DDX41-216ENST00000513562 CDC34P49427 236 aaPredicted RBP6.79□□□□□ -1.32
DDX41-216ENST00000513562 CRIP1P50238 77 aa6.79□□□□□ -1.32
DDX41-216ENST00000513562 Q86TA4 180 aa6.79□□□□□ -1.32
DDX41-216ENST00000513562 STPG4Q8N801 248 aa6.79□□□□□ -1.32
DDX41-216ENST00000513562 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms