RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 TRAV4A0A0B4J268 109 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 A0A1B0GW15 77 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 A0A1B0GXF2 115 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 A8MWV9 139 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 TRGC1P0CF51 173 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 DAD1P61803 113 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 C12orf74Q32Q52 190 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 MRPL54Q6P161 138 aaKnown RBP8.89□□□□□ -0.99
PDPN-210ENST00000513143 C11orf45Q8TAV5 145 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 AP1S3Q96PC3 154 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 EDA2RQ9HAV5 297 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 STAB2Q8WWQ8 2551 aa8.89□□□□□ -0.99
PDPN-210ENST00000513143 TRBV24-1A0A075B6N3 115 aa8.88□□□□□ -0.99
PDPN-210ENST00000513143 SCO1O75880 301 aa8.88□□□□□ -0.99
PDPN-210ENST00000513143 CRYGDP07320 174 aa8.88□□□□□ -0.99
PDPN-210ENST00000513143 HBBP68871 147 aa8.88□□□□□ -0.99
PDPN-210ENST00000513143 CFAP126Q5VTH2 177 aa8.88□□□□□ -0.99
PDPN-210ENST00000513143 SAMD10Q9BYL1 202 aa8.88□□□□□ -0.99
PDPN-210ENST00000513143 TGIF2-C20orf24A0A0A6YYL0 155 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 CIDEAO60543 219 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 S100A8P05109 93 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 EVI2AP22794 236 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 CAMPP49913 170 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 RASL11AQ6T310 242 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 C14orf178Q8N769 122 aaPredicted RBP8.87□□□□□ -0.99
PDPN-210ENST00000513143 GATD1Q8NB37 220 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 OR4C5Q8NGB2 326 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 TMEM191AQ9H0A3 160 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 PGPEP1Q9NXJ5 209 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 KIF25-AS1Q9Y6Z4 181 aa8.87□□□□□ -0.99
PDPN-210ENST00000513143 A0A087WWL8 130 aa8.86□□□□□ -0.99
PDPN-210ENST00000513143 LINC00315P59091 139 aa8.86□□□□□ -0.99
PDPN-210ENST00000513143 NANOS2P60321 138 aaKnown RBP8.86□□□□□ -0.99
PDPN-210ENST00000513143 ZFP2Q6ZN57 461 aa8.86□□□□□ -0.99
PDPN-210ENST00000513143 SMIM15Q7Z3B0 74 aa8.86□□□□□ -0.99
PDPN-210ENST00000513143 ZNF479Q96JC4 524 aa8.86□□□□□ -0.99
PDPN-210ENST00000513143 RHODO00212 210 aa8.85□□□□□ -0.99
PDPN-210ENST00000513143 IGHV3-53P01767 116 aa8.85□□□□□ -0.99
PDPN-210ENST00000513143 ATP5G1P05496 136 aa8.85□□□□□ -0.99
PDPN-210ENST00000513143 SMIM17P0DL12 118 aa8.85□□□□□ -0.99
PDPN-210ENST00000513143 DPH3P1Q9H4G8 78 aa8.85□□□□□ -0.99
PDPN-210ENST00000513143 FHL2Q14192 279 aa8.84□□□□□ -0.99
PDPN-210ENST00000513143 COX19Q49B96 90 aa8.84□□□□□ -0.99
PDPN-210ENST00000513143 FAM74A4Q5TZK3 123 aa8.84□□□□□ -0.99
PDPN-210ENST00000513143 TMEM136Q6ZRR5 245 aa8.84□□□□□ -0.99
PDPN-210ENST00000513143 Q6ZTC4 211 aa8.84□□□□□ -0.99
PDPN-210ENST00000513143 FAM210BQ96KR6 192 aa8.84□□□□□ -0.99
PDPN-210ENST00000513143 IGHV3-73A0A0B4J1V6 119 aa8.83□□□□□ -1
PDPN-210ENST00000513143 COLCA2A8K830 154 aa8.83□□□□□ -1
PDPN-210ENST00000513143 HOXA5P20719 270 aa8.83□□□□□ -1
PDPN-210ENST00000513143 RNF185Q96GF1 192 aa8.83□□□□□ -1
PDPN-210ENST00000513143 GNB1LQ9BYB4 327 aa8.83□□□□□ -1
PDPN-210ENST00000513143 TGP01266 2768 aa8.82□□□□□ -1
PDPN-210ENST00000513143 TRGV4A0A0C4DH28 118 aa8.82□□□□□ -1
PDPN-210ENST00000513143 MGPP08493 103 aa8.82□□□□□ -1
PDPN-210ENST00000513143 GATA1P15976 413 aaPredicted RBP8.82□□□□□ -1
PDPN-210ENST00000513143 RAB4AP20338 218 aa8.82□□□□□ -1
PDPN-210ENST00000513143 RAB4BP61018 213 aa8.82□□□□□ -1
PDPN-210ENST00000513143 FAM104BQ5XKR9 115 aa8.82□□□□□ -1
PDPN-210ENST00000513143 Q6ZSN1 163 aa8.82□□□□□ -1
PDPN-210ENST00000513143 AMN1Q8IY45 258 aa8.82□□□□□ -1
PDPN-210ENST00000513143 HLA-DQA1P01909 254 aa8.81□□□□□ -1
PDPN-210ENST00000513143 SLAQ13239 276 aa8.81□□□□□ -1
PDPN-210ENST00000513143 ZNF56Q15929 161 aa8.81□□□□□ -1
PDPN-210ENST00000513143 FRZBQ92765 325 aa8.81□□□□□ -1
PDPN-210ENST00000513143 DEFB131BA0A096LNP1 70 aa8.8□□□□□ -1
PDPN-210ENST00000513143 TRAV10A0A0B4J240 114 aa8.8□□□□□ -1
PDPN-210ENST00000513143 TRBV6-4A0A1B0GX49 114 aa8.8□□□□□ -1
PDPN-210ENST00000513143 F5H697 171 aa8.8□□□□□ -1
PDPN-210ENST00000513143 F5H768 121 aa8.8□□□□□ -1
PDPN-210ENST00000513143 MT-ND6P03923 174 aa8.8□□□□□ -1
PDPN-210ENST00000513143 HTN3P15516 51 aa8.8□□□□□ -1
PDPN-210ENST00000513143 SUMO4Q6EEV6 95 aa8.8□□□□□ -1
PDPN-210ENST00000513143 PRO0255Q9UI72 69 aa8.8□□□□□ -1
PDPN-210ENST00000513143 HHLA3Q9XRX5 114 aa8.8□□□□□ -1
PDPN-210ENST00000513143 CRYBA4P53673 196 aa8.8□□□□□ -1
PDPN-210ENST00000513143 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
PDPN-210ENST00000513143 SLC25A29Q8N8R3 303 aa8.8□□□□□ -1
PDPN-210ENST00000513143 MRAP2Q96G30 205 aa8.8□□□□□ -1
PDPN-210ENST00000513143 TRAV26-2A0A0B4J265 109 aa8.79□□□□□ -1
PDPN-210ENST00000513143 K7EQD1 137 aa8.79□□□□□ -1
PDPN-210ENST00000513143 M0QY20 66 aa8.79□□□□□ -1
PDPN-210ENST00000513143 APCSP02743 223 aa8.79□□□□□ -1
PDPN-210ENST00000513143 RAB5AP20339 215 aa8.79□□□□□ -1
PDPN-210ENST00000513143 PHLDA1Q8WV24 401 aaPredicted RBP8.79□□□□□ -1
PDPN-210ENST00000513143 VSIG2Q96IQ7 327 aa8.79□□□□□ -1
PDPN-210ENST00000513143 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
PDPN-210ENST00000513143 TRAPPC1Q9Y5R8 145 aa8.79□□□□□ -1
PDPN-210ENST00000513143 TRAV26-1A0A087WT03 109 aa8.78□□□□□ -1
PDPN-210ENST00000513143 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
PDPN-210ENST00000513143 H7C1H1 209 aa8.78□□□□□ -1
PDPN-210ENST00000513143 PAX4O43316 350 aa8.78□□□□□ -1
PDPN-210ENST00000513143 RHOHQ15669 191 aa8.78□□□□□ -1
PDPN-210ENST00000513143 PRADC1Q9BSG0 188 aa8.78□□□□□ -1
PDPN-210ENST00000513143 H3BNG1 76 aa8.77□□□□□ -1.01
PDPN-210ENST00000513143 GAS8-AS1O95177 125 aa8.77□□□□□ -1.01
PDPN-210ENST00000513143 PPBPP02775 128 aa8.77□□□□□ -1.01
PDPN-210ENST00000513143 P0DMU3 169 aa8.77□□□□□ -1.01
PDPN-210ENST00000513143 FAM231AP0DMU4 169 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms